Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50716 | Soybean | nucleus | 47.04 | 46.6 |
| KRH02368 | Soybean | cytosol | 39.88 | 43.39 |
| KRH02367 | Soybean | cytosol, golgi, nucleus | 45.48 | 43.2 |
| KRH02369 | Soybean | cytosol | 42.99 | 41.44 |
| VIT_05s0077g00850.t01 | Wine grape | nucleus | 45.48 | 40.33 |
| PGSC0003DMT400023282 | Potato | cytosol | 26.48 | 29.93 |
| PGSC0003DMT400047166 | Potato | nucleus | 37.38 | 25.97 |
| PGSC0003DMT400039746 | Potato | nucleus | 40.19 | 17.79 |
| PGSC0003DMT400064440 | Potato | nucleus | 39.88 | 17.58 |
| PGSC0003DMT400076435 | Potato | nucleus | 38.01 | 13.17 |
| PGSC0003DMT400015781 | Potato | nucleus | 38.01 | 10.52 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400011956 | EnsemblPlantsGene:PGSC0003DMG400004694 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF4 | PFAM:PF00179 | PFscan:PS50127 | PGSC:PGSC0003DMG400004694 |
| SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0002962120 | UniProt:M1A0G0 | MapMan:35.1 |
Description
Ubiquitin-conjugating enzyme, E2 [Source:PGSC_GENE;Acc:PGSC0003DMG400004694]
Coordinates
chr12:-:59971577..59972645
Molecular Weight (calculated)
36852.3 Da
IEP (calculated)
9.439
GRAVY (calculated)
-0.421
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFPHFDVAL DESDHYFIKS NQSRKEKKCF NDTNTSTCKA IMKEWKILEK NLPDSIYVQT YEKRLDLLRA VIIGASGTPY HDGLFFFDIV FPSDYPNNPP
101: KLSYLSRGFH MNPNLYPNGR VCLSLINTWH GDTVEKWTPK NSTILQLLVS IQGLVLNAEP YFNEPVRVRC INDSDALSKL SLSYNEDVFI RTCKTMLCHI
201: RAPPKNFEEF VYQYFCERGE FILASLNAYA GGKATAGLYQ GDIKSSSRPY TSFQFQKISR KMFADLESAI KVLSTAKAED GAKKKGKRNN ESSKALVVEK
301: NKPKIGLMQK IKNFFKFIFE R
101: KLSYLSRGFH MNPNLYPNGR VCLSLINTWH GDTVEKWTPK NSTILQLLVS IQGLVLNAEP YFNEPVRVRC INDSDALSKL SLSYNEDVFI RTCKTMLCHI
201: RAPPKNFEEF VYQYFCERGE FILASLNAYA GGKATAGLYQ GDIKSSSRPY TSFQFQKISR KMFADLESAI KVLSTAKAED GAKKKGKRNN ESSKALVVEK
301: NKPKIGLMQK IKNFFKFIFE R
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.