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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH50716 Soybean nucleus 51.1 57.1
KRH02368 Soybean cytosol 43.09 52.88
KRH02369 Soybean cytosol 47.79 51.95
KRH02367 Soybean cytosol, golgi, nucleus 46.96 50.3
VIT_00s1927g00020.t01 Wine grape cytosol, nucleus 33.43 50.21
PGSC0003DMT400011956 Potato cytosol 40.33 45.48
Solyc01g079290.1.1 Tomato cytosol 25.14 32.04
VIT_12s0028g03630.t01 Wine grape nucleus 40.61 28.77
VIT_19s0014g02760.t01 Wine grape nucleus 42.27 20.4
VIT_00s0265g00070.t01 Wine grape cytosol 39.78 15.25
VIT_03s0038g02570.t01 Wine grape nucleus 37.85 11.32
Protein Annotations
EntrezGene:100241396wikigene:100241396Gene3D:3.10.110.10MapMan:35.1ProteinID:CCB47967ProteinID:CCB47967.1
UniProt:F6H720EMBL:FN595246GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006464GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740GO:GO:0019538GO:GO:0031625
GO:GO:0061630InterPro:IPR000608InterPro:IPR016135EntrezGene:LOC100241396wikigene:LOC100241396PFAM:PF00179
PFscan:PS50127PANTHER:PTHR44273PANTHER:PTHR44273:SF4SMART:SM00212SUPFAM:SSF54495TIGR:TC59101
InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_enzyme/RWDUniParc:UPI00019832CFArrayExpress:VIT_05s0077g00850EnsemblPlantsGene:VIT_05s0077g00850EnsemblPlants:VIT_05s0077g00850.t01
unigene:Vvi.12324unigene:Vvi.13285RefSeq:XP_002278781RefSeq:XP_002278781.1SEG:seg:
Description
No Description!
Coordinates
chr5:-:662169..663505
Molecular Weight (calculated)
40478.2 Da
IEP (calculated)
9.696
GRAVY (calculated)
-0.384
Length
362 amino acids
Sequence
(BLAST)
001: MDPNGEIVEE AEEDNGFRRF DVVSDDSDHH YVKLNRTANS DADCFSNAAS GVYSKIMQEW KILEKNLPDS IFVRVYERRI DLLRAVIVGA VGTPYHDGLF
101: AFDLAFPPDY PAHPPQVHYR SFGLRLNPNL YANGRVCLSL LNTWVGRKKE KWDPSQSTVL QVLVSLQGLV LNEKPYFNEP GHGVLPGRSL WEKNSMAYSE
201: TVFALSCKTM LFMLRKPPKN FEALIAAHFR DRALFILEAC NAYTDGRVKV GYYRGDGSSS SSSSSSSSTV HVSHTFKTSM QKVFPDLVHT FTRNGASLGN
301: FVEQVKQDRK KASSQTQAAV HKKQGIAIKF ISKLKMILGL KKSRKSNGVV GSTANNRTEI EG
Best Arabidopsis Sequence Match ( AT2G16920.1 )
(BLAST)
0001: MEHEQDDPGT STNVGVDSSV DDSMASLSIC DSEHPNIYRQ DIVKNKKTGS VGVVSEVAGD SDSDSDISDE EEDDDDDEDN DDDDEDVEEG KKASEENVVN
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
Arabidopsis Description
UBC23Probable ubiquitin-conjugating enzyme E2 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.