Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc01g111680.2.1 | Tomato | nucleus | 57.27 | 69.86 |
KRG90672 | Soybean | nucleus | 63.97 | 68.86 |
PGSC0003DMT400015781 | Potato | nucleus | 63.22 | 65.95 |
AT2G16920.1 | Thale cress | nucleus | 58.18 | 63.88 |
CDX89761 | Canola | nucleus | 55.12 | 63.71 |
CDX72600 | Canola | cytosol | 6.03 | 60.83 |
GSMUA_Achr1P26360_001 | Banana | nucleus | 47.77 | 58.62 |
VIT_00s1927g00020.t01 | Wine grape | cytosol, nucleus | 11.32 | 56.85 |
CDY02226 | Canola | endoplasmic reticulum, extracellular | 53.8 | 53.71 |
Bra013040.1-P | Field mustard | cytosol, extracellular, mitochondrion, nucleus | 54.3 | 52.86 |
GSMUA_Achr8P34010_001 | Banana | cytosol | 43.72 | 51.66 |
Bra017778.1-P | Field mustard | cytosol | 37.52 | 50.73 |
CDY42703 | Canola | cytosol, mitochondrion, nucleus | 28.1 | 50.6 |
Os01t0125900-01 | Rice | extracellular, plasma membrane | 44.21 | 50.33 |
EES02568 | Sorghum | nucleus | 44.88 | 49.1 |
Zm00001d008520_P001 | Maize | nucleus | 44.71 | 49.09 |
Zm00001d040036_P022 | Maize | nucleus | 43.97 | 48.41 |
HORVU3Hr1G004520.2 | Barley | nucleus | 43.97 | 48.28 |
TraesCS3A01G047700.3 | Wheat | nucleus | 44.3 | 48.16 |
TraesCS3B01G034500.5 | Wheat | nucleus | 44.3 | 48.11 |
TraesCS3D01G032000.4 | Wheat | nucleus | 44.21 | 48.07 |
VIT_05s0077g00850.t01 | Wine grape | nucleus | 11.32 | 37.85 |
VIT_00s0265g00070.t01 | Wine grape | cytosol | 29.42 | 37.71 |
VIT_12s0028g03630.t01 | Wine grape | nucleus | 13.64 | 32.29 |
VIT_19s0014g02760.t01 | Wine grape | nucleus | 14.3 | 23.07 |
Protein Annotations
EntrezGene:100258896 | wikigene:100258896 | Gene3D:3.10.110.10 | MapMan:35.1 | ProteinID:CCB60610 | ProteinID:CCB60610.1 |
ncoils:Coil | UniProt:F6I0Z4 | EMBL:FN596508 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
GO:GO:0019538 | GO:GO:0031625 | GO:GO:0061630 | InterPro:IPR000608 | InterPro:IPR016135 | EntrezGene:LOC100258896 |
wikigene:LOC100258896 | PFAM:PF00179 | PFscan:PS50127 | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF1 | SMART:SM00212 |
SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000210A5A0 | ArrayExpress:VIT_03s0038g02570 | EnsemblPlantsGene:VIT_03s0038g02570 |
EnsemblPlants:VIT_03s0038g02570.t01 | unigene:Vvi.16220 | RefSeq:XP_002277945 | RefSeq:XP_002277945.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr3:-:1786670..1794856
Molecular Weight (calculated)
134264.0 Da
IEP (calculated)
4.366
GRAVY (calculated)
-0.554
Length
1210 amino acids
Sequence
(BLAST)
(BLAST)
0001: MYFFFIKKRR RYFWFWYIID SIHTEERDQS CCPKAVQETA LSLHLFPPLF ESLVFKMRIN QQDGVSQVDE PSTSVHDNTT LDQGDATVNG ILSDSNAIYE
0101: SNEATKMPDV AKETLNIPCI YRQDVVRSNE VGMIGIVSEV AGDSDSDSSI TDDEEEEDDD NDEDETGGNE EGDNHGNTNA SSDGNRSGGN YKSSPLPDDQ
0201: VRVLWMDDSE TTENLNDVTV IDRGFMHGDY VASASDPTGQ VGVVVDVNIS IDLLPIDGTI IEQVSSRDLK RVRDFAVGDY VVLGPWLGRI DDVLDNVTVS
0301: FDDGSVCKVM KADPLRLKPV TKNILEDGHF PYYPGQRVRA RSSSVFKNSR WLSGLWKANR LEGTVTKVTV GSVFIYWIAS AGYGPDSSTT PAEEQNPKNL
0401: KLLSCFAHAN WQVGDWCLLP SLALSSSITQ DKGQSELEPH DSVQGELDSS KSRSRCDQEE VLLEEAHGTG ESMDLDAVSA VDVNNRNIEG NASSQSSPCS
0501: SSVSVSKEPV HETWLLHRKK IRKLVVRRDK KTRKKEDNYE KALLIVNTRT RVDVSWQDGT TARGLPSTTL IPIDSPGDHE FVSEQYVVEK ASDESDDASE
0601: VRRVGVVKSV NAKERTACVR WLKPVVRAED PREFDREEVV SVYELEGHLD YDYCYGDVVV RLSPVSVSAH TGTAVEEEPK QQSGSNEVKQ DLNNNSGCKK
0701: VEDESADGAC MDFSDLSWVG NITGLKNGDI EVTWADGMVS TVGPQAVYVV GRDDDDESIA GGSEVSDDAA SWETVNDDEM DALENAKEEI GLPNTADTDP
0801: ETEEHTTVED NNPGRNGALS LPLAALGFVT RLATGIFSRG RKHVEPPSSD SEGENELQSQ GAIKPSQIKV SHDETNSPNN VIDNFGLQTT HEKEEEHVGV
0901: EVTDSLDMAE ALVNLRANDP DALACHEYES CSFKRFDIAK DPLDHYFIGA SGQNSNGRKW LKKVQQDWSI LQNNLPDGIY VRVYEDRMDL LRAVIAGAYG
1001: TPYQDGLFFF DFHLPPEYPD VPPSAYYHSG GWRINPNLYE EGKVCLSLLN TWTGRGNEVW DPVSSSILQV LVSLQGLVLN SKPYFNEAGY DKQIGTAEGE
1101: KNSLSYNENT FLLNCKTMMY LMRKPPKDFE ELVKDHFKRQ GYYILKACDA YMKGYLIGSL SKDASTSDRS NTNSTSVGFK LMLTKIAPRL FLALNEVGAD
1201: CQEFKHLQQS
0101: SNEATKMPDV AKETLNIPCI YRQDVVRSNE VGMIGIVSEV AGDSDSDSSI TDDEEEEDDD NDEDETGGNE EGDNHGNTNA SSDGNRSGGN YKSSPLPDDQ
0201: VRVLWMDDSE TTENLNDVTV IDRGFMHGDY VASASDPTGQ VGVVVDVNIS IDLLPIDGTI IEQVSSRDLK RVRDFAVGDY VVLGPWLGRI DDVLDNVTVS
0301: FDDGSVCKVM KADPLRLKPV TKNILEDGHF PYYPGQRVRA RSSSVFKNSR WLSGLWKANR LEGTVTKVTV GSVFIYWIAS AGYGPDSSTT PAEEQNPKNL
0401: KLLSCFAHAN WQVGDWCLLP SLALSSSITQ DKGQSELEPH DSVQGELDSS KSRSRCDQEE VLLEEAHGTG ESMDLDAVSA VDVNNRNIEG NASSQSSPCS
0501: SSVSVSKEPV HETWLLHRKK IRKLVVRRDK KTRKKEDNYE KALLIVNTRT RVDVSWQDGT TARGLPSTTL IPIDSPGDHE FVSEQYVVEK ASDESDDASE
0601: VRRVGVVKSV NAKERTACVR WLKPVVRAED PREFDREEVV SVYELEGHLD YDYCYGDVVV RLSPVSVSAH TGTAVEEEPK QQSGSNEVKQ DLNNNSGCKK
0701: VEDESADGAC MDFSDLSWVG NITGLKNGDI EVTWADGMVS TVGPQAVYVV GRDDDDESIA GGSEVSDDAA SWETVNDDEM DALENAKEEI GLPNTADTDP
0801: ETEEHTTVED NNPGRNGALS LPLAALGFVT RLATGIFSRG RKHVEPPSSD SEGENELQSQ GAIKPSQIKV SHDETNSPNN VIDNFGLQTT HEKEEEHVGV
0901: EVTDSLDMAE ALVNLRANDP DALACHEYES CSFKRFDIAK DPLDHYFIGA SGQNSNGRKW LKKVQQDWSI LQNNLPDGIY VRVYEDRMDL LRAVIAGAYG
1001: TPYQDGLFFF DFHLPPEYPD VPPSAYYHSG GWRINPNLYE EGKVCLSLLN TWTGRGNEVW DPVSSSILQV LVSLQGLVLN SKPYFNEAGY DKQIGTAEGE
1101: KNSLSYNENT FLLNCKTMMY LMRKPPKDFE ELVKDHFKRQ GYYILKACDA YMKGYLIGSL SKDASTSDRS NTNSTSVGFK LMLTKIAPRL FLALNEVGAD
1201: CQEFKHLQQS
0001: MEHEQDDPGT STNVGVDSSV DDSMASLSIC DSEHPNIYRQ DIVKNKKTGS VGVVSEVAGD SDSDSDISDE EEDDDDDEDN DDDDEDVEEG KKASEENVVN
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
Arabidopsis Description
UBC23Probable ubiquitin-conjugating enzyme E2 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.