Skip to main content
crop-pal logo
Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g111680.2.1 Tomato nucleus 57.27 69.86
KRG90672 Soybean nucleus 63.97 68.86
PGSC0003DMT400015781 Potato nucleus 63.22 65.95
AT2G16920.1 Thale cress nucleus 58.18 63.88
CDX89761 Canola nucleus 55.12 63.71
CDX72600 Canola cytosol 6.03 60.83
GSMUA_Achr1P26360_001 Banana nucleus 47.77 58.62
VIT_00s1927g00020.t01 Wine grape cytosol, nucleus 11.32 56.85
CDY02226 Canola endoplasmic reticulum, extracellular 53.8 53.71
Bra013040.1-P Field mustard cytosol, extracellular, mitochondrion, nucleus 54.3 52.86
GSMUA_Achr8P34010_001 Banana cytosol 43.72 51.66
Bra017778.1-P Field mustard cytosol 37.52 50.73
CDY42703 Canola cytosol, mitochondrion, nucleus 28.1 50.6
Os01t0125900-01 Rice extracellular, plasma membrane 44.21 50.33
EES02568 Sorghum nucleus 44.88 49.1
Zm00001d008520_P001 Maize nucleus 44.71 49.09
Zm00001d040036_P022 Maize nucleus 43.97 48.41
HORVU3Hr1G004520.2 Barley nucleus 43.97 48.28
TraesCS3A01G047700.3 Wheat nucleus 44.3 48.16
TraesCS3B01G034500.5 Wheat nucleus 44.3 48.11
TraesCS3D01G032000.4 Wheat nucleus 44.21 48.07
VIT_05s0077g00850.t01 Wine grape nucleus 11.32 37.85
VIT_00s0265g00070.t01 Wine grape cytosol 29.42 37.71
VIT_12s0028g03630.t01 Wine grape nucleus 13.64 32.29
VIT_19s0014g02760.t01 Wine grape nucleus 14.3 23.07
Protein Annotations
EntrezGene:100258896wikigene:100258896Gene3D:3.10.110.10MapMan:35.1ProteinID:CCB60610ProteinID:CCB60610.1
ncoils:CoilUniProt:F6I0Z4EMBL:FN596508GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740
GO:GO:0019538GO:GO:0031625GO:GO:0061630InterPro:IPR000608InterPro:IPR016135EntrezGene:LOC100258896
wikigene:LOC100258896PFAM:PF00179PFscan:PS50127PANTHER:PTHR44422PANTHER:PTHR44422:SF1SMART:SM00212
SUPFAM:SSF54495InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_enzyme/RWDUniParc:UPI000210A5A0ArrayExpress:VIT_03s0038g02570EnsemblPlantsGene:VIT_03s0038g02570
EnsemblPlants:VIT_03s0038g02570.t01unigene:Vvi.16220RefSeq:XP_002277945RefSeq:XP_002277945.1SEG:seg:
Description
No Description!
Coordinates
chr3:-:1786670..1794856
Molecular Weight (calculated)
134264.0 Da
IEP (calculated)
4.366
GRAVY (calculated)
-0.554
Length
1210 amino acids
Sequence
(BLAST)
0001: MYFFFIKKRR RYFWFWYIID SIHTEERDQS CCPKAVQETA LSLHLFPPLF ESLVFKMRIN QQDGVSQVDE PSTSVHDNTT LDQGDATVNG ILSDSNAIYE
0101: SNEATKMPDV AKETLNIPCI YRQDVVRSNE VGMIGIVSEV AGDSDSDSSI TDDEEEEDDD NDEDETGGNE EGDNHGNTNA SSDGNRSGGN YKSSPLPDDQ
0201: VRVLWMDDSE TTENLNDVTV IDRGFMHGDY VASASDPTGQ VGVVVDVNIS IDLLPIDGTI IEQVSSRDLK RVRDFAVGDY VVLGPWLGRI DDVLDNVTVS
0301: FDDGSVCKVM KADPLRLKPV TKNILEDGHF PYYPGQRVRA RSSSVFKNSR WLSGLWKANR LEGTVTKVTV GSVFIYWIAS AGYGPDSSTT PAEEQNPKNL
0401: KLLSCFAHAN WQVGDWCLLP SLALSSSITQ DKGQSELEPH DSVQGELDSS KSRSRCDQEE VLLEEAHGTG ESMDLDAVSA VDVNNRNIEG NASSQSSPCS
0501: SSVSVSKEPV HETWLLHRKK IRKLVVRRDK KTRKKEDNYE KALLIVNTRT RVDVSWQDGT TARGLPSTTL IPIDSPGDHE FVSEQYVVEK ASDESDDASE
0601: VRRVGVVKSV NAKERTACVR WLKPVVRAED PREFDREEVV SVYELEGHLD YDYCYGDVVV RLSPVSVSAH TGTAVEEEPK QQSGSNEVKQ DLNNNSGCKK
0701: VEDESADGAC MDFSDLSWVG NITGLKNGDI EVTWADGMVS TVGPQAVYVV GRDDDDESIA GGSEVSDDAA SWETVNDDEM DALENAKEEI GLPNTADTDP
0801: ETEEHTTVED NNPGRNGALS LPLAALGFVT RLATGIFSRG RKHVEPPSSD SEGENELQSQ GAIKPSQIKV SHDETNSPNN VIDNFGLQTT HEKEEEHVGV
0901: EVTDSLDMAE ALVNLRANDP DALACHEYES CSFKRFDIAK DPLDHYFIGA SGQNSNGRKW LKKVQQDWSI LQNNLPDGIY VRVYEDRMDL LRAVIAGAYG
1001: TPYQDGLFFF DFHLPPEYPD VPPSAYYHSG GWRINPNLYE EGKVCLSLLN TWTGRGNEVW DPVSSSILQV LVSLQGLVLN SKPYFNEAGY DKQIGTAEGE
1101: KNSLSYNENT FLLNCKTMMY LMRKPPKDFE ELVKDHFKRQ GYYILKACDA YMKGYLIGSL SKDASTSDRS NTNSTSVGFK LMLTKIAPRL FLALNEVGAD
1201: CQEFKHLQQS
Best Arabidopsis Sequence Match ( AT2G16920.1 )
(BLAST)
0001: MEHEQDDPGT STNVGVDSSV DDSMASLSIC DSEHPNIYRQ DIVKNKKTGS VGVVSEVAGD SDSDSDISDE EEDDDDDEDN DDDDEDVEEG KKASEENVVN
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
Arabidopsis Description
UBC23Probable ubiquitin-conjugating enzyme E2 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.