Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P26360_001 | Banana | nucleus | 64.84 | 67.34 |
| CDX72600 | Canola | cytosol | 6.45 | 55.0 |
| Os01t0125900-01 | Rice | extracellular, plasma membrane | 49.8 | 47.98 |
| EES02568 | Sorghum | nucleus | 50.2 | 46.47 |
| Zm00001d008520_P001 | Maize | nucleus | 49.9 | 46.37 |
| Solyc01g111680.2.1 | Tomato | nucleus | 44.43 | 45.87 |
| HORVU3Hr1G004520.2 | Barley | nucleus | 48.93 | 45.46 |
| KRG90672 | Soybean | nucleus | 49.71 | 45.28 |
| Zm00001d040036_P022 | Maize | nucleus | 48.44 | 45.13 |
| CDX89761 | Canola | nucleus | 46.0 | 44.99 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 48.83 | 44.92 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 13.09 | 44.82 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 48.73 | 44.79 |
| TraesCS3A01G047700.3 | Wheat | nucleus | 48.54 | 44.65 |
| VIT_03s0038g02570.t01 | Wine grape | nucleus | 51.66 | 43.72 |
| AT2G16920.1 | Thale cress | nucleus | 46.29 | 43.01 |
| PGSC0003DMT400015781 | Potato | nucleus | 48.34 | 42.67 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 26.86 | 40.92 |
| Bra017778.1-P | Field mustard | cytosol | 35.16 | 40.22 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 43.75 | 36.96 |
| Bra013040.1-P | Field mustard | cytosol, extracellular, mitochondrion, nucleus | 43.95 | 36.2 |
| GSMUA_Achr9P06210_001 | Banana | cytosol | 31.45 | 36.02 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 15.82 | 35.37 |
| GSMUA_Achr10P... | Banana | nucleus | 16.21 | 34.87 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 16.99 | 32.4 |
| GSMUA_Achr9P00220_001 | Banana | cytosol | 13.48 | 27.88 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P34010_001 | EnsemblPlants:GSMUA_Achr8T34010_001 | EnsemblPlantsGene:GSMUA_Achr8G34010_001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | ncoils:Coil | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF1 | PFAM:PF00179 |
| PFscan:PS50127 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI000295A836 | UniProt:M0TW03 |
| MapMan:35.1 | : | : | : | : | : |
Description
Putative Probable ubiquitin-conjugating enzyme E2 23 [Source:GMGC_GENE;Acc:GSMUA_Achr8G34010_001]
Coordinates
chr8:+:34915159..34920318
Molecular Weight (calculated)
113175.0 Da
IEP (calculated)
4.418
GRAVY (calculated)
-0.431
Length
1024 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESGHHLAHE SLAGYTTMKV NNVPHAIDSE QNASCSDAES RSDVGKPVKT GELTDTQATD VFVYRQDVVK CSKCKGLHGI VLETAGDSDP EGSISGYDSS
0101: EEDEDNNDEG NGDDNGDVNS NIIDGGSNDF LQDGQVRLLW CDGSETVENT NDVTVVDRSF LRGDIVASAT DPTGQLGVII NVNMTVDLLS TDGVVIENVS
0201: SRALKHIREF SVGDFVVLGP WLGKVDEVFD NVTVLFDDGY ICEVVKPDPL QLRPLIMPVV SDTDCPYYPG QRVRAISSSV FEGSSRKAKL LKGTVIKVQT
0301: DSVVVYWIAS AVHGVGDNSA TFPSKEQNPK NLTLLSCSSH INWQLADWCL LLSYPHTNDL PKNCSCSTSY SVSKKPANGS WPSYPLLIVK AFNKVDVAWQ
0401: DGTTEFGLQS TSLIPFDTPN DHEFFPGEFV VEKAQNEGGS SSETNRLGVL RSANSQEQTV CVRWLKPASR PGDLKEFNGE EVVSAYELER HADYDYFYGD
0501: VVVRLPPVSD DIPNSEISEE NRALDNEACE DFTSLSWVGN IVGLQDGDIE VSWADGMVSK VPPQEVYIED EDNDDDDDDI GVSDDDASWE TASENEMDVL
0601: EGTEKEVDPQ NPSDSNLQGK HSATILEKES SGGQSRPLTL PLAAIDYAVK HTTGLFSRAK KQLESSDGED ENKATEKAEV KIEDNLEKPA SMGLHDGSEG
0701: SHIMDDPCKF KHFDTAENPL DHHFLAVAEM GTGGRKWGKK VQREWSILEK NLPDDIYVRV FEDRMDLIRA VIVGAYGTPY QDGLFFFDFH LSSEYPQVPP
0801: SVYYHSGGLR MNPNLYVDGK ICLSLLNTWT GKGSEVWDPS FSSVLQVLVS LQGLVLNDKP YFNEAGYEKH IGTVEGEKNA SPYNENAYLT NLKSMLYLLR
0901: RPPTHFEDFV KDHFRRRGHY ILKACEAYYT RGCLIGSLTK DGCLTEESQE NSCSVGFNLT LAKILPHLIP ALNEVGADCL AHCKRILAIL RAIIKTKTKV
1001: RFKTNDCIPV YLTEIYHSNN SIRK
0101: EEDEDNNDEG NGDDNGDVNS NIIDGGSNDF LQDGQVRLLW CDGSETVENT NDVTVVDRSF LRGDIVASAT DPTGQLGVII NVNMTVDLLS TDGVVIENVS
0201: SRALKHIREF SVGDFVVLGP WLGKVDEVFD NVTVLFDDGY ICEVVKPDPL QLRPLIMPVV SDTDCPYYPG QRVRAISSSV FEGSSRKAKL LKGTVIKVQT
0301: DSVVVYWIAS AVHGVGDNSA TFPSKEQNPK NLTLLSCSSH INWQLADWCL LLSYPHTNDL PKNCSCSTSY SVSKKPANGS WPSYPLLIVK AFNKVDVAWQ
0401: DGTTEFGLQS TSLIPFDTPN DHEFFPGEFV VEKAQNEGGS SSETNRLGVL RSANSQEQTV CVRWLKPASR PGDLKEFNGE EVVSAYELER HADYDYFYGD
0501: VVVRLPPVSD DIPNSEISEE NRALDNEACE DFTSLSWVGN IVGLQDGDIE VSWADGMVSK VPPQEVYIED EDNDDDDDDI GVSDDDASWE TASENEMDVL
0601: EGTEKEVDPQ NPSDSNLQGK HSATILEKES SGGQSRPLTL PLAAIDYAVK HTTGLFSRAK KQLESSDGED ENKATEKAEV KIEDNLEKPA SMGLHDGSEG
0701: SHIMDDPCKF KHFDTAENPL DHHFLAVAEM GTGGRKWGKK VQREWSILEK NLPDDIYVRV FEDRMDLIRA VIVGAYGTPY QDGLFFFDFH LSSEYPQVPP
0801: SVYYHSGGLR MNPNLYVDGK ICLSLLNTWT GKGSEVWDPS FSSVLQVLVS LQGLVLNDKP YFNEAGYEKH IGTVEGEKNA SPYNENAYLT NLKSMLYLLR
0901: RPPTHFEDFV KDHFRRRGHY ILKACEAYYT RGCLIGSLTK DGCLTEESQE NSCSVGFNLT LAKILPHLIP ALNEVGADCL AHCKRILAIL RAIIKTKTKV
1001: RFKTNDCIPV YLTEIYHSNN SIRK
0001: MEHEQDDPGT STNVGVDSSV DDSMASLSIC DSEHPNIYRQ DIVKNKKTGS VGVVSEVAGD SDSDSDISDE EEDDDDDEDN DDDDEDVEEG KKASEENVVN
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
Arabidopsis Description
UBC23Probable ubiquitin-conjugating enzyme E2 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.