Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02568 | Sorghum | nucleus | 91.29 | 90.96 |
| Zm00001d040036_P022 | Maize | nucleus | 87.02 | 87.26 |
| Os01t0125900-01 | Rice | extracellular, plasma membrane | 75.68 | 78.46 |
| HORVU3Hr1G004520.2 | Barley | nucleus | 74.59 | 74.59 |
| TraesCS3A01G047700.3 | Wheat | nucleus | 74.41 | 73.67 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 74.23 | 73.5 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 74.05 | 73.25 |
| GSMUA_Achr1P26360_001 | Banana | nucleus | 53.09 | 59.33 |
| CDX72600 | Canola | cytosol | 6.08 | 55.83 |
| Solyc01g111680.2.1 | Tomato | nucleus | 46.01 | 51.11 |
| GSMUA_Achr8P34010_001 | Banana | cytosol | 46.37 | 49.9 |
| KRG90672 | Soybean | nucleus | 49.46 | 48.49 |
| CDX89761 | Canola | nucleus | 46.01 | 48.42 |
| PGSC0003DMT400015781 | Potato | nucleus | 49.27 | 46.81 |
| AT2G16920.1 | Thale cress | nucleus | 46.37 | 46.37 |
| Zm00001d009007_P001 | Maize | cytosol | 10.07 | 45.31 |
| VIT_03s0038g02570.t01 | Wine grape | nucleus | 49.09 | 44.71 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 7.71 | 42.08 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 7.71 | 42.08 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 25.05 | 41.07 |
| Bra017778.1-P | Field mustard | cytosol | 32.3 | 39.78 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 43.01 | 39.11 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 13.07 | 38.61 |
| Bra013040.1-P | Field mustard | cytosol, extracellular, mitochondrion, nucleus | 43.19 | 38.29 |
| Zm00001d047959_P001 | Maize | cytosol | 7.62 | 37.67 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 14.61 | 35.78 |
| Zm00001d009513_P003 | Maize | cytosol | 12.07 | 33.5 |
| Zm00001d049101_P001 | Maize | cytosol | 4.72 | 33.33 |
| Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 30.22 | 23.12 |
Protein Annotations
| EntrezGene:100304369 | Gene3D:3.10.110.10 | MapMan:35.1 | ProteinID:AQK90114.1 | ProteinID:AQK90115.1 | ProteinID:AQK90119.1 |
| ProteinID:AQK90120.1 | ProteinID:AQK90121.1 | InterPro:IPR000608 | InterPro:IPR016135 | UniProt:K7V9X1 | PFAM:PF00179 |
| PFscan:PS50127 | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF1 | SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000221CAFE | EnsemblPlantsGene:Zm00001d008520 | EnsemblPlants:Zm00001d008520_P001 | EnsemblPlants:Zm00001d008520_T001 | SEG:seg |
Description
Probable ubiquitin-conjugating enzyme E2 23
Coordinates
chr8:+:11329210..11342342
Molecular Weight (calculated)
121983.0 Da
IEP (calculated)
4.314
GRAVY (calculated)
-0.499
Length
1102 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESLPNGSVN NAEHNQENKK SMDASVPEEV QDVFIYREDV VSLKSKEDVR GLVLEVAGEY DSEGSITDDD IDTEEHEDKT VRGAENGAAD GDNASNGAEV
0101: ESQSSLPDNK VRVLWLDDSE KTEDIDEVVV VDRSFLHGDL VASASDPTGQ MGLVLDVNLV VDLQGVNGDM IKGVSSKDLR RIREFNVGDY VVSGLWLGRV
0201: DEVLDSVNVL FDDGSVCKVN RADPMCLKPV FGPMHPDTDC PFYPGQRVKA VSSSVFKTSR WLNGLWRASR LEGTVTKVES VSVIVYWIAS AHFASDQQPV
0301: PPEKQNPKDL TLLSCFSYAN WQLTDWCLPH RYTLCTNDTV INSDKHTGQI CTCPESSVPL SDIPESQADV QTEQDQMTDT DAGHRQIDVD STADGLSMSD
0401: GDNSCIAKES ETSVSSILKE PQDNATSRKK LRKVSLKKHK RTKKRDDSFE RALLIANTCT KVDVIWQDGT KECGVAATSL IPIHNPNDHE FFPEQYVVDK
0501: VTNDVDDSSE PRRVGLVRSV SAKDRTVTVS WFKPSLHPEE TKNIVCNEIV SAYELDGHPD YDYCYGDIVV RLPPVSPVIE STNNKDQMEL DRTVDASEGF
0601: AASNDAPSNT SASEQLLQKE SCSQFTSLSW AGNIVGFQDG EIEVIWGDGS ISKVGPHEIY VVGREDDDAS LDDGTASDGA SWETVDDNEM DVLDDSAKDD
0701: SQSIPENSIE REDGSFSSQN GSSVATGPLS VAFGFVTRLA SDLFARGRRH LDRSSNSDAM DEVESHQSNE VSETSDDIDK INENNVESPE DAAVIENDSS
0801: VEKSVDVVMA DNLVDLECFK HFDILQCPPD HHYLENIAQG TGGRKWVKKV QQEWSILEKN LPDYIYVRVF EDRMDLLRAV IVGASGTPYQ DGLFFFDFYL
0901: PPEYPQVPPS AYYHSGGLRV NPNLYVDGKV CLSLLNTWTG RGNEVWDPSS SSILQVLVSL QGLVLNEKPY FNEAGYEKQV GTVEGEKNAV PYNENTYLLS
1001: VKSMLYILRR PPLHFEDFVK SHFRKRGHYI LKACEAYLQG NVVGTLTDDA CTTNRSTEHS SSVGFKLALA KILPRLITAL KEHGADCDQY EHLGKTDPVR
1101: ES
0101: ESQSSLPDNK VRVLWLDDSE KTEDIDEVVV VDRSFLHGDL VASASDPTGQ MGLVLDVNLV VDLQGVNGDM IKGVSSKDLR RIREFNVGDY VVSGLWLGRV
0201: DEVLDSVNVL FDDGSVCKVN RADPMCLKPV FGPMHPDTDC PFYPGQRVKA VSSSVFKTSR WLNGLWRASR LEGTVTKVES VSVIVYWIAS AHFASDQQPV
0301: PPEKQNPKDL TLLSCFSYAN WQLTDWCLPH RYTLCTNDTV INSDKHTGQI CTCPESSVPL SDIPESQADV QTEQDQMTDT DAGHRQIDVD STADGLSMSD
0401: GDNSCIAKES ETSVSSILKE PQDNATSRKK LRKVSLKKHK RTKKRDDSFE RALLIANTCT KVDVIWQDGT KECGVAATSL IPIHNPNDHE FFPEQYVVDK
0501: VTNDVDDSSE PRRVGLVRSV SAKDRTVTVS WFKPSLHPEE TKNIVCNEIV SAYELDGHPD YDYCYGDIVV RLPPVSPVIE STNNKDQMEL DRTVDASEGF
0601: AASNDAPSNT SASEQLLQKE SCSQFTSLSW AGNIVGFQDG EIEVIWGDGS ISKVGPHEIY VVGREDDDAS LDDGTASDGA SWETVDDNEM DVLDDSAKDD
0701: SQSIPENSIE REDGSFSSQN GSSVATGPLS VAFGFVTRLA SDLFARGRRH LDRSSNSDAM DEVESHQSNE VSETSDDIDK INENNVESPE DAAVIENDSS
0801: VEKSVDVVMA DNLVDLECFK HFDILQCPPD HHYLENIAQG TGGRKWVKKV QQEWSILEKN LPDYIYVRVF EDRMDLLRAV IVGASGTPYQ DGLFFFDFYL
0901: PPEYPQVPPS AYYHSGGLRV NPNLYVDGKV CLSLLNTWTG RGNEVWDPSS SSILQVLVSL QGLVLNEKPY FNEAGYEKQV GTVEGEKNAV PYNENTYLLS
1001: VKSMLYILRR PPLHFEDFVK SHFRKRGHYI LKACEAYLQG NVVGTLTDDA CTTNRSTEHS SSVGFKLALA KILPRLITAL KEHGADCDQY EHLGKTDPVR
1101: ES
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.