CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
golgi 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10881
KRH20454
KRH21442
KRH50043

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23430.1	KRH10881	AT2G33770.1	22634761
AT3G23430.1	KRH20454	AT2G33770.1	22634761
AT3G23430.1	KRH21442	AT2G33770.1	22634761
AT3G23430.1	KRH50043	AT2G33770.1	22634761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07887	Soybean	extracellular, golgi, mitochondrion, plasma membrane	62.4	66.67
KRH26830	Soybean	endoplasmic reticulum, golgi	27.2	14.78
CDX85098	Canola	cytosol, peroxisome, plasma membrane	66.4	14.72
KRH34432	Soybean	cytosol	89.6	14.47
CDY09011	Canola	cytosol, peroxisome, plasma membrane	67.2	14.05
KRG92358	Soybean	cytosol	86.4	13.95
TraesCS6D01G364200.1	Wheat	mitochondrion	52.0	13.32
KRH69098	Soybean	cytosol	76.8	12.58
KRH31683	Soybean	cytosol, nucleus, plasma membrane	76.0	12.43
Zm00001d051945_P001	Maize	peroxisome, plasma membrane, plastid	51.2	11.57
CDY18123	Canola	cytosol	67.2	11.01
PGSC0003DMT400044207	Potato	cytosol, nucleus, plasma membrane	68.8	10.89
Bra023727.1-P	Field mustard	cytosol	67.2	10.71
AT3G23430.1	Thale cress	cytosol, nucleus, plasma membrane	66.4	10.61
Bra014948.1-P	Field mustard	cytosol	66.4	10.59
Solyc09g090360.2.1	Tomato	cytosol	66.4	10.53
VIT_05s0049g01410.t01	Wine grape	cytosol	64.8	10.16
CDX77515	Canola	cytosol	65.6	10.1
Os02t0809800-01	Rice	cytosol	58.4	8.96
TraesCS6D01G364100.1	Wheat	cytosol	56.0	8.86
Zm00001d018445_P004	Maize	cytosol, nucleus, plasma membrane	56.8	8.82
TraesCS6A01G379700.1	Wheat	cytosol	56.0	8.76
GSMUA_Achr1P20470_001	Banana	nucleus	55.2	8.75
EES07731	Sorghum	cytosol, nucleus, plasma membrane	56.0	8.62
GSMUA_Achr6P36590_001	Banana	cytosol	56.0	8.61
TraesCS6D01G364300.1	Wheat	cytosol	53.6	8.59
HORVU6Hr1G089130.9	Barley	cytosol	55.2	8.53
TraesCS6B01G418600.1	Wheat	cytosol, nucleus, plasma membrane	54.4	8.52
TraesCS6A01G380000.1	Wheat	cytosol	54.4	8.51
TraesCS6D01G364600.1	Wheat	plastid	54.4	8.5
TraesCS6B01G418000.1	Wheat	cytosol	52.8	8.45
HORVU6Hr1G089190.23	Barley	cytosol	54.4	8.41
TraesCS6B01G418100.2	Wheat	cytosol, peroxisome, plasma membrane	53.6	8.22
KRH00677	Soybean	plasma membrane	25.6	7.62
KRH71113	Soybean	cytosol	48.0	7.6
KRH75548	Soybean	cytosol	48.0	7.59
KRH22527	Soybean	plasma membrane	28.0	7.43
KRH40514	Soybean	plasma membrane	24.0	7.14
KRH30768	Soybean	golgi, plasma membrane	11.2	6.42
KRG89566	Soybean	cytosol	39.2	6.16
KRH70782	Soybean	cytosol	36.8	6.13
KRH01215	Soybean	cytosol	36.8	5.93
KRG89567	Soybean	cytosol, peroxisome, plasma membrane	37.6	5.9
KRG89568	Soybean	cytosol, peroxisome, plasma membrane	36.8	5.85
KRH40050	Soybean	cytosol	35.2	5.8
KRG89558	Soybean	endoplasmic reticulum	33.6	5.24
KRH50561	Soybean	endoplasmic reticulum	33.6	5.23
CDY09013	Canola	nucleus	0.8	0.51
KRH26831	Soybean	plasma membrane	0.0	0.0

Protein Annotations

MapMan:35.1	EMBL:ACUP02001152	InterPro:EXS_C	EnsemblPlantsGene:GLYMA_02G186500	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005802	GO:GO:0005886	GO:GO:0016020
GO:GO:0016021	InterPro:IPR004342	UniProt:K7K9D3	EnsemblPlants:KRH72033	ProteinID:KRH72033	ProteinID:KRH72033.1
PFAM:PF03124	PFscan:PS51380	PANTHER:PTHR10783	PANTHER:PTHR10783:SF82	TMHMM:TMhelix	UniParc:UPI000294E3E8

Description

hypothetical protein

Coordinates

chr2:+:33828690..33829310

Molecular Weight (calculated)

15032.6 Da

IEP (calculated)

9.824

GRAVY (calculated)

0.277

Length

125 amino acids

Sequence
(BLAST)

001: MVAAEARVTY SRQNDNLWFA IILITSVVAT MYQLYWDFIK DWGFLNPKSI NPWLRNDLIL KNKNIYYMSI VLNIVLRVTW VETIMHFKVG PVHSQLLDFL
101: LVALEVIRRG HWNFYKYWLV KTQCF

Best Arabidopsis Sequence Match ( AT3G23430.1 )
(BLAST)

001: MVKFSKELEA QLIPEWKEAF VNYCLLKKQI KKIKTSRKPK PASHYPIGHH SDFGRSLFDP VRKLARTFSD KLFSNSEKPE ILQVRRRRGS SETGDDVDEI
101: YQTELVQLFS EEDEVKVFFA RLDEELNKVN QFHKPKETEF LERGEILKKQ LETLAELKQI LSDRKKRNLS GSNSHRSFSS SVRNSDFSAG SPGELSEIQS
201: ETSRTDEIIE ALERNGVSFI NSATRSKTKG GKPKMSLRVD IPDAVAGAEG GIARSIATAM SVLWEELVNN PRSDFTNWKN IQSAEKKIRS AFVELYRGLG
301: LLKTYSSLNM IAFTKIMKKF DKVAGQNASS TYLKVVKRSQ FISSDKVVRL MDEVESIFTK HFANNDRKKA MKFLKPHQTK DSHMVTFFVG LFTGCFISLF
401: VIYIILAHLS GIFTSSDQVS YLETVYPVFS VFALLSLHMF MYGCNLYMWK NTRINYTFIF EFAPNTALRY RDAFLMGTTF MTSVVAAMVI HLILRASGFS
501: ASQVDTIPGI LLLIFICVLI CPFNTFYRPT RFCFIRILRK IVCSPFYKVL MVDFFMGDQL TSQIPLLRHL ETTGCYFLAQ SFKTHEYNTC KNGRYYREFA
601: YLISFLPYFW RAMQCVRRWW DESNPDHLIN MGKYVSAMVA AGVRITYARE NNDLWLTMVL VSSVVATIYQ LYWDFVKDWG LLNPKSKNPW LRDNLVLRNK
701: NFYYLSIALN LVLRVAWIET IMRFRVSPVQ SHLLDFFLAS LEVIRRGHWN FYRVENEHLN NVGQFRAVKT VPLPFLDRDS DG

Arabidopsis Description

PHO1Phosphate transporter PHO1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S403]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.