CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40050	Soybean	cytosol	92.14	94.2
VIT_14s0108g01130.t01	Wine grape	nucleus, peroxisome, plasma membrane	57.09	69.22
Solyc02g088240.2.1	Tomato	mitochondrion, plasma membrane	30.03	66.95
PGSC0003DMT400003629	Potato	cytosol	60.31	61.1
Solyc02g088220.2.1	Tomato	cytosol	60.57	60.49
CDY04052	Canola	nucleus	49.87	59.63
Solyc02g088230.2.1	Tomato	cytosol	59.41	58.21
Solyc02g088250.2.1	Tomato	cytosol	30.67	57.49
CDY44412	Canola	cytosol, nucleus, plasma membrane	56.06	55.27
Bra033080.1-P	Field mustard	cytosol, nucleus, plasma membrane	55.8	55.02
CDY00103	Canola	nucleus, peroxisome, plasma membrane	55.54	54.01
AT3G29060.1	Thale cress	cytosol, nucleus, plasma membrane	55.67	54.0
Bra036222.1-P	Field mustard	cytosol, nucleus, plasma membrane	55.28	53.96
CDY19999	Canola	cytosol, nucleus, plasma membrane	55.28	53.76
KRG89566	Soybean	cytosol	54.25	52.96
KRG89567	Soybean	cytosol, peroxisome, plasma membrane	54.12	52.76
KRG89568	Soybean	cytosol, peroxisome, plasma membrane	52.19	51.53
KRH50561	Soybean	endoplasmic reticulum	51.68	49.94
KRH70782	Soybean	cytosol	48.2	49.8
KRG89558	Soybean	endoplasmic reticulum	50.64	49.0
KRH72033	Soybean	cytosol, extracellular, golgi	5.93	36.8
KRH31683	Soybean	cytosol, nucleus, plasma membrane	32.99	33.51
KRH71113	Soybean	cytosol	34.02	33.46
KRH69098	Soybean	cytosol	32.73	33.29
KRH75548	Soybean	cytosol	33.63	33.0
KRG92358	Soybean	cytosol	32.6	32.69
KRH34432	Soybean	cytosol	32.47	32.56
KRH07887	Soybean	extracellular, golgi, mitochondrion, plasma membrane	4.12	27.35
KRH30768	Soybean	golgi, plasma membrane	7.22	25.69
KRH26830	Soybean	endoplasmic reticulum, golgi	7.35	24.78
KRH00677	Soybean	plasma membrane	13.4	24.76
KRH40514	Soybean	plasma membrane	13.14	24.29
KRH22527	Soybean	plasma membrane	13.27	21.87
KRH26831	Soybean	plasma membrane	5.03	17.33

Protein Annotations

EntrezGene:100795104	MapMan:24.2.7.4	MapMan:25.3.2.2	EMBL:ACUP02011508	ncoils:Coil	InterPro:EXS_C
EnsemblPlantsGene:GLYMA_18G261900	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005802	GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	UniProt:I1N4F8	InterPro:IPR004331
InterPro:IPR004342	EnsemblPlants:KRH01215	ProteinID:KRH01215	ProteinID:KRH01215.1	ProteinID:KRH01216.1	PFAM:PF03105
PFAM:PF03124	InterPro:PHO1_SPX	PFscan:PS51380	PFscan:PS51382	PANTHER:PTHR10783	PANTHER:PTHR10783:SF56
InterPro:SPX_dom	TMHMM:TMhelix	UniParc:UPI000233E9DF	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:-:54775190..54781499

Molecular Weight (calculated)

89348.6 Da

IEP (calculated)

9.524

GRAVY (calculated)

-0.114

Length

776 amino acids

Sequence
(BLAST)

001: MKFGKEFVSQ MVPEWEEAYM DYNSLKATLK NMSKFRELNE SAPMASTPKG SLKRRLTLYR AFSGLTDRQR GSPRKGEDEV ILVRAEEGEG SEGLYQTMFL
101: KPSEEGAEQD LVFFKKLDHE FNKVNSFYKK MVNGMVEEAE ELSKQMNALI ALRIKVDNVG FRNLGSNGIS TSFSMNHDIN DAKTGLSRVH MDVIHEVEMS
201: NGTHLENGSG NYEEQTTSKT SVGAFRPASL ETLDHVKINM TTPETPLSTI KGLLSSSKSD QSFSKKELRK AEEQISIALK EFYNKLRLLK SYSFLNLLAF
301: SKIMKKYDKV SSRNASKDYL KMVDSSYVGS SDEVNRLMER VEHAFIKHFA NGNHRKGMNT LRPTAKKERH RITFLLGLFT GCSIALIVAL IILIHARNIL
401: YSEGRTRYMD NIFPLYSLFG YIVLHMIIYS ANIYLWRRYK INFPFIFGFK EGTELGYREV FLLSSGLAVL SLAAVLSNLD MEMDQRTKSF SALTELVPLC
501: LVIVLLLITF CPFNIIYKSS RFFLIQCAFH CVCAPLYKVN FPENFLADQL TSQVQAFRSL EFYVCYYFWG NFKTRSNNCL KSDVYKAFYL IVAIIPFWIR
601: CLQCFRRLLE ERNTMHGLNG LKYISTVVAL VLRTTNEFQR GMVWKILAAT SSGIATIVNT YWDIVIDWGL LRRNSRNPWL REKLSVPNKN VYFVAMVLNV
701: ILRLAWMQSV LGIRETPILH RTALTALVTC LEILRRGIWN FFRLENEHLN NVGNYRAFKS VPLPFNYEDE EENTVI

Best Arabidopsis Sequence Match ( AT3G29060.1 )
(BLAST)

001: MKFGREFETQ MIQEWKEAYM DYRSLKSIVK QILRYRLQKQ QRPPPPPPPP STGDTVPLKT DGGEGGGGGG GGGPGLSRRI SLYRAFSGLT NRASRSPKKS
101: HKHHNPLSSK RHHHHHNHHH YHLFDDDEEQ IILINEDETA SYTTTFLNSA EEGGEMEVQF FRRLDGEFNK VLRFYKQKVE NVMEEADELS RQLNVLIALR
201: VKVENPHVHL PPDLNSVASA PSSPHSTMRT PAPSPMDVIR EMEKTEDKKV FKPAPVEMLD HVKLKIDPET PLLTLKMMIL GLPSEQTFSK PELRRAEELM
301: NRAFVEFYQK LRFLKSYCFL NQLAFAKILK KYDKTTSRNA SKPYLNTVDH SYLGSCDEVS RLMSRVEATF IKHFANGNHR EGMKCLRPKT KREKHRITYF
401: LGFFSGCAVA LAIAITVLVH IRGLTKSEGR HQYMENIFPL YSLFGFVAVH LFMYAADIYF WSRYRVNYPF IFGFEQGNDL GYREVLLVGS GLAVLTFGGV
501: ISNLDMEMDP RTKSFSVITE LVPLALLVCL MMVLFCPFNI IYRSSRYFFV GSVFRCLLSP LYKVILPDFF LADQLTSQVQ TFRSLLFYVC YYGWGGDFKR
601: RTHTCYDSEI YKELYLVVAI IPYWFRFAQS IRRLVEEKDK MHGLNALKYL STILAVAART IFEMKRGTYW LTVAVTTSSI ATLFNTYWDI FRDWGLMNRN
701: SKNPWLRDKL LVPYKSIYFI VMVANVVLRL AWMQTVLGIK EAPFLHKRAL VAVVASLEIV RRGIWNFFRL ENEHLNNVGK YRAFKSVPLP FQELGGSKSV

Arabidopsis Description

PHO1-H9Phosphate transporter PHO1 homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJW0]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.