CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50561	Soybean	endoplasmic reticulum	91.02	90.91
KRG89566	Soybean	cytosol	70.07	70.69
KRG89567	Soybean	cytosol, peroxisome, plasma membrane	69.33	69.85
KRG89568	Soybean	cytosol, peroxisome, plasma membrane	67.83	69.21
CDY71475	Canola	extracellular, golgi, plasma membrane	23.07	68.52
CDY39346	Canola	plasma membrane	32.79	64.62
CDY33781	Canola	cytosol	60.72	64.42
CDY16129	Canola	cytosol	60.85	64.04
VIT_01s0182g00150.t01	Wine grape	cytosol	64.59	63.71
CDY56003	Canola	plasma membrane	46.01	62.65
AT1G14040.1	Thale cress	cytosol	63.47	62.61
Bra019690.1-P	Field mustard	cytosol	62.72	62.1
Bra026863.1-P	Field mustard	cytosol	62.22	61.99
CDY04143	Canola	cytosol	62.22	61.91
Bra017394.1-P	Field mustard	cytosol	62.22	61.91
Bra017395.1-P	Field mustard	cytosol, nucleus, plasma membrane	62.09	61.71
CDY04142	Canola	cytosol, nucleus, plasma membrane	62.09	61.71
Bra024784.1-P	Field mustard	cytosol, nucleus, plasma membrane	59.6	61.6
CDY45175	Canola	cytosol, nucleus, plasma membrane	59.48	61.47
CDX98143	Canola	cytosol	60.85	61.46
Bra019688.1-P	Field mustard	cytosol	59.48	61.39
Bra026565.1-P	Field mustard	cytosol	62.22	61.3
CDY37178	Canola	cytosol	62.22	61.08
CDY09339	Canola	cytosol	62.22	61.08
CDY03011	Canola	cytosol, nucleus, plasma membrane	59.1	60.77
CDY16128	Canola	cytosol	58.98	60.64
AT2G03240.1	Thale cress	cytosol, nucleus, plasma membrane	62.22	60.63
Bra026864.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.1	60.49
CDY03007	Canola	cytosol	59.98	60.28
CDY36429	Canola	cytosol, peroxisome, plasma membrane	61.35	59.64
CDY03008	Canola	cytosol, peroxisome, plasma membrane	56.48	59.61
Bra019686.1-P	Field mustard	cytosol	60.22	59.56
Bra024782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.35	59.43
CDY72508	Canola	golgi, peroxisome	33.04	59.42
CDY45174	Canola	cytosol, peroxisome, plasma membrane	58.73	58.88
Bra024783.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.73	58.88
AT2G03260.1	Thale cress	cytosol, peroxisome, plasma membrane	57.86	57.5
CDY65467	Canola	cytosol	53.62	55.7
CDY64495	Canola	cytosol	54.24	55.56
AT2G03250.1	Thale cress	cytosol	48.75	54.38
Bra017393.1-P	Field mustard	cytosol, peroxisome, plasma membrane	49.0	54.28
CDY56000	Canola	cytosol	48.25	52.16
KRH40050	Soybean	cytosol	49.25	52.04
KRH01215	Soybean	cytosol	49.0	50.64
Bra019689.1-P	Field mustard	cytosol, nucleus, plasma membrane	45.76	49.46
KRH70782	Soybean	cytosol	44.64	47.67
KRH72033	Soybean	cytosol, extracellular, golgi	5.24	33.6
KRH71113	Soybean	cytosol	32.42	32.95
KRH75548	Soybean	cytosol	32.29	32.74
KRG92358	Soybean	cytosol	30.92	32.04
KRH34432	Soybean	cytosol	30.55	31.65
KRH31683	Soybean	cytosol, nucleus, plasma membrane	30.05	31.54
KRH69098	Soybean	cytosol	29.05	30.54
CDY60937	Canola	cytosol, nucleus, plasma membrane	61.97	29.51
KRH26830	Soybean	endoplasmic reticulum, golgi	7.61	26.52
KRH07887	Soybean	extracellular, golgi, mitochondrion, plasma membrane	3.87	26.5
KRH00677	Soybean	plasma membrane	13.22	25.24
KRH30768	Soybean	golgi, plasma membrane	6.73	24.77
KRH40514	Soybean	plasma membrane	12.97	24.76
KRH22527	Soybean	plasma membrane	13.97	23.78
KRH26831	Soybean	plasma membrane	5.36	19.11

Protein Annotations

EntrezGene:100805979	MapMan:24.2.7.4	MapMan:25.3.2.2	EMBL:ACUP02012217	InterPro:EXS_C	EnsemblPlantsGene:GLYMA_20G031700
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005802
GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	UniProt:I1NDM8	InterPro:IPR004331	InterPro:IPR004342
EnsemblPlants:KRG89558	ProteinID:KRG89558	ProteinID:KRG89558.1	PFAM:PF03105	PFAM:PF03124	InterPro:PHO1_SPX
PFscan:PS51380	PFscan:PS51382	PANTHER:PTHR10783	PANTHER:PTHR10783:SF62	InterPro:SPX_dom	TMHMM:TMhelix
UniParc:UPI000295C000	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:3928773..3936330

Molecular Weight (calculated)

92989.0 Da

IEP (calculated)

9.584

GRAVY (calculated)

-0.163

Length

802 amino acids

Sequence
(BLAST)

001: MKFGKEFAAQ MVPEWQEAYM DYGYLKSLLK DVILHKQRKK PHSSATPAMR KLSLRRTFSG LTHHHRHYQA ESPEHDIENQ SILVHSVLRD GHVKYETTFL
101: MAAEEGGEYE LVYFKRLDDE FNKVDKFYKS KVEEVMKEAA ELNKQMDALV AFRVKVENPT ASFDCSVEMT RLASDVSASA TALHASTPRG VQLNRARTGR
201: IPTLIDYIKE EGSTHRGHSE ESGDDDKGEE IETTNKSVEV HKKKKNLTPI KPIRPASVEI LNRVQLNNTC ETPRSTIRGF IKYPGQTEIN FTKENLSKVE
301: ETLKLAFIEF YQKLRLLKNY TFLNVLAFSK IMKKYDKITL RGAAKAYMKM VDKSNLGSSD EVTRLMERVE NVFIKHFSNS NRNKGMGILR PKPKRERHRV
401: TFSMGFSAGC SAALTVALIL IVRARKIMDH SGSTQYMEIM FPLYSLFGFV VLHMLMYAAN IYFWRRYRVN HSFIFGFKQG TDLGYHQVLF VSFVLAALAL
501: ASVIANLDME IDPVTKQFEE FTELLPLFLV LSVIAILLCP LNIVYRSSRM FFLTCVCHCI CAPLYKVTLP DFFMADQFTS QVQALRSFEF YICYYGWGDF
601: KHRETSCKSN GIFRAFSFIV AAIPYWSRFL QCLRRLYEEK DIMQGYNALK YFLTIAAVCL RTASTLNQGM GWTVLAWIFS ISTSIFSTYW DLVLDWGLLQ
701: RHSKNRWLRD KLLIPHKSVY FAAMVMNVLL RFAWLQTILN FKFSFLHRQA MVSIAASLEI IRRGMWSFFR IENEHLNNVG KYRAFKSVPL PFNYDEEEDK
801: DE

Best Arabidopsis Sequence Match ( AT1G14040.1 )
(BLAST)

001: MKFGKEFSSQ MVPEWQQAYM DYDFLKTLLK EIITFKRRTN NAPSHGGAKT GGGLNRKLTL YRAFSGLVST PRHKRSNSSH DVEEGVQLTG SMRSGPILVN
101: TTASHGYETT FLMAAEEGGE YELVFFRRLD DEFNKVDKFY RKKVEEVLKE AAMLNKQMDA LIAFRVKVEN PDGWRWEERT VEMTRLASDI ATSAAALSAS
201: TPAGAKSMKV RSQEHMEAIQ EGGSSRAGLM EDDEEDEDEQ NETSVVSTGA IDNETTTSRM RGARPSPIDV LGRVKINNTK ETPRSTIKGV LKVSKQTDLK
301: FSRENLMKVE ESLKRAFIEF YQKLRLLKSY SFLNVLAFSK ILKKYDKITS RDATKPYMKV VDSSYLGSSD EVMRLMERVE ATFIKHFANA NRAKAMNILR
401: PKAKRERHRI TFSTGFSAGC VFSLIVALVA IIRTRNLLEM EGQKEYMNTM FPLYSLFGFI VLHIIVYAAN IYYWRRYRVN YSFIFGFKQG TELGYRQVLL
501: VGFSIGVLAL LCVLANLDME ADPKTKAYQA RTEILPLILL AAMFIVLVLP FNYFYRSSRF FFLTCLFHCL AAPLYKVTLP DFFLGDQLTS QVQAIRSIEF
601: YICYYGWGDF RHRKSTCKES DVYNTFFFIV AVIPYVSRLL QCLRRLFEEK NPEQGYNGLK YFLTIVAVCL RTAYSIQKGQ VAWRVLAAVF SFIAAIFCTY
701: WDFVHDWGLL NRTSKNRWLR DKLLVPQKKV YFIAMVLNVL LRFAWIQTVL DFNFSFMHRQ TMVAIVASLE IIRRGIWNFF RLENEHLNNV GKYRAFKSVP
801: LPFNYDEDDD KDN

Arabidopsis Description

PHO1;H3Phosphate transporter PHO1 homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.