CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi

Predictor Summary:

plastid 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome
Any Predictor:	golgi, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	golgi
PProwler:	secretory
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39346	Canola	plasma membrane	70.4	77.15
CDY71475	Canola	extracellular, golgi, plasma membrane	42.38	70.0
CDY45173	Canola	cytosol, golgi, peroxisome	23.09	57.87
CDY56003	Canola	plasma membrane	75.56	57.22
CDY44990	Canola	extracellular, golgi	9.19	53.25
CDY56000	Canola	cytosol	87.89	52.83
Bra019689.1-P	Field mustard	cytosol, nucleus, plasma membrane	81.17	48.79
CDY33781	Canola	cytosol	71.97	42.46
CDY16129	Canola	cytosol	72.2	42.26
AT1G14040.1	Thale cress	cytosol	73.32	40.22
CDX98143	Canola	cytosol	71.08	39.92
CDY16128	Canola	cytosol	69.73	39.87
CDY04143	Canola	cytosol	70.63	39.08
CDY04142	Canola	cytosol, nucleus, plasma membrane	70.63	39.03
CDY36429	Canola	cytosol, peroxisome, plasma membrane	71.3	38.55
CDY09339	Canola	cytosol	69.28	37.82
CDY37178	Canola	cytosol	69.06	37.7
CDY03008	Canola	cytosol, peroxisome, plasma membrane	62.78	36.84
CDY03007	Canola	cytosol	64.13	35.84
CDY45174	Canola	cytosol, peroxisome, plasma membrane	63.45	35.38
CDY45175	Canola	cytosol, nucleus, plasma membrane	61.44	35.31
CDY04251	Canola	endoplasmic reticulum, mitochondrion	6.73	35.29
CDY03011	Canola	cytosol, nucleus, plasma membrane	60.99	34.87
CDY65467	Canola	cytosol	59.64	34.46
CDY64495	Canola	cytosol	60.31	34.35
CDX92696	Canola	cytosol, peroxisome, plasma membrane	55.83	34.3
CDY16184	Canola	cytosol	56.73	34.19
KRG89567	Soybean	cytosol, peroxisome, plasma membrane	60.76	34.05
KRG89566	Soybean	cytosol	60.31	33.84
CDX82870	Canola	cytosol	56.5	33.73
CDY58396	Canola	cytosol	55.61	33.6
CDY52351	Canola	cytosol, peroxisome, plasma membrane	54.04	33.57
CDY08975	Canola	cytosol, peroxisome, plasma membrane	54.93	33.56
CDY46445	Canola	cytosol	56.28	33.56
CDY04052	Canola	nucleus	48.43	33.28
KRG89568	Soybean	cytosol, peroxisome, plasma membrane	58.3	33.08
KRG89558	Soybean	endoplasmic reticulum	59.42	33.04
KRH50561	Soybean	endoplasmic reticulum	58.74	32.63
VIT_01s0182g00150.t01	Wine grape	cytosol	58.52	32.1
CDY45171	Canola	cytosol, peroxisome, plasma membrane	42.38	29.76
CDY44412	Canola	cytosol, nucleus, plasma membrane	48.43	27.45
CDX95933	Canola	cytosol	47.76	27.17
CDY19999	Canola	cytosol, nucleus, plasma membrane	48.21	26.94
CDY40927	Canola	cytosol	47.09	26.82
CDY00103	Canola	nucleus, peroxisome, plasma membrane	47.98	26.82
CDY33783	Canola	cytosol, peroxisome, plasma membrane	31.17	24.87
CDY09011	Canola	cytosol, peroxisome, plasma membrane	33.18	24.75
CDX85098	Canola	cytosol, peroxisome, plasma membrane	28.7	22.7
CDX74638	Canola	golgi, plasma membrane, plastid	21.52	21.05
CDY33680	Canola	golgi, plasma membrane, plastid	21.52	20.82
CDX84740	Canola	plasma membrane	13.9	20.0
CDX84739	Canola	plasma membrane, plastid	20.4	19.61
CDY54499	Canola	cytosol	33.86	19.61
CDY65458	Canola	plasma membrane, plastid	20.18	19.35
CDX81539	Canola	cytosol	33.41	19.35
CDX95992	Canola	cytosol	33.41	19.35
CDY38614	Canola	cytosol	33.18	19.22
CDY60937	Canola	cytosol, nucleus, plasma membrane	70.85	18.76
CDY04252	Canola	cytosol	32.29	18.68
CDY07366	Canola	cytosol	33.18	18.55
CDX77515	Canola	cytosol	33.41	18.35
CDY18123	Canola	cytosol	29.6	17.3
CDX98567	Canola	golgi, nucleus, plasma membrane	6.5	14.22
CDY58360	Canola	endoplasmic reticulum, plasma membrane	4.48	13.79
CDY71691	Canola	endoplasmic reticulum, extracellular, plasma membrane	4.04	13.24
CDX76897	Canola	mitochondrion	3.36	12.5
CDX82438	Canola	cytosol	4.71	10.4
CDY22918	Canola	cytosol	5.38	10.34
CDX81844	Canola	cytosol	2.91	7.22
CDY56002	Canola	cytosol	2.24	3.06
CDY36431	Canola	cytosol	0.9	1.83
CDY52794	Canola	nucleus	0.0	0.0
CDY09013	Canola	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDY72508	EnsemblPlantsGene:GSBRNA2T00030203001	GO:A0A078JXW3	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:EXS_C	InterPro:IPR004342	PANTHER:PTHR10783	PANTHER:PTHR10783:SF43	PFAM:PF03124	PFscan:PS51380
ProteinID:CDY72508	ProteinID:CDY72508.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE23CE	UniProt:A0A078JXW3
MapMan:24.2.7.4	MapMan:25.3.2.2	:	:	:	:

Description

BnaC05g49630DBnaC05g49630D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JXW3]

Coordinates

chrLK051461:+:1..1988

Molecular Weight (calculated)

52472.0 Da

IEP (calculated)

9.734

GRAVY (calculated)

0.074

Length

446 amino acids

Sequence
(BLAST)

001: RQVVRLTKRV EEDFIKHFAE DNRTKGMNIL RPKMTRERHR LTFSTGKNQK LASIGFSAGC VFSLIVALAA IIRTRNSLQE DGQEIYMNTM FRLYSWFGFV
101: MLHIMVYAAN IYYWRRYRIN YSKIFGFKQG TELGHRQVLL VAFSIGVFAL LCVLANLDME VDPETKDYQA FTELLPLFLL IGIFGVLYLP FDFFYHSKRK
201: FYLTCMFHCI AAPFYEVSFA DSFLGDQFTS QVQALRSFEF YICYYGWGDF KHRKNTCTKS HAYNGFLFIV AVIPFVSRLL QCLRRLVDDK KTDHRWNGLK
301: YFLTIVAVCF RTANSIQPAQ IAWRVLAIIF SVVAAIFGTY WDFVHDWGLL KRGSENRWLR DNLLIPQKEV YFIAMVLNVL LRFAWIQTVL DFNLPFRHST
401: QTMVAVVASL EIIRRGIWNF FRLENEHLNN VRKEEESRIK GEDKDA

Best Arabidopsis Sequence Match ( AT1G14040.1 )
(BLAST)

001: MKFGKEFSSQ MVPEWQQAYM DYDFLKTLLK EIITFKRRTN NAPSHGGAKT GGGLNRKLTL YRAFSGLVST PRHKRSNSSH DVEEGVQLTG SMRSGPILVN
101: TTASHGYETT FLMAAEEGGE YELVFFRRLD DEFNKVDKFY RKKVEEVLKE AAMLNKQMDA LIAFRVKVEN PDGWRWEERT VEMTRLASDI ATSAAALSAS
201: TPAGAKSMKV RSQEHMEAIQ EGGSSRAGLM EDDEEDEDEQ NETSVVSTGA IDNETTTSRM RGARPSPIDV LGRVKINNTK ETPRSTIKGV LKVSKQTDLK
301: FSRENLMKVE ESLKRAFIEF YQKLRLLKSY SFLNVLAFSK ILKKYDKITS RDATKPYMKV VDSSYLGSSD EVMRLMERVE ATFIKHFANA NRAKAMNILR
401: PKAKRERHRI TFSTGFSAGC VFSLIVALVA IIRTRNLLEM EGQKEYMNTM FPLYSLFGFI VLHIIVYAAN IYYWRRYRVN YSFIFGFKQG TELGYRQVLL
501: VGFSIGVLAL LCVLANLDME ADPKTKAYQA RTEILPLILL AAMFIVLVLP FNYFYRSSRF FFLTCLFHCL AAPLYKVTLP DFFLGDQLTS QVQAIRSIEF
601: YICYYGWGDF RHRKSTCKES DVYNTFFFIV AVIPYVSRLL QCLRRLFEEK NPEQGYNGLK YFLTIVAVCL RTAYSIQKGQ VAWRVLAAVF SFIAAIFCTY
701: WDFVHDWGLL NRTSKNRWLR DKLLVPQKKV YFIAMVLNVL LRFAWIQTVL DFNFSFMHRQ TMVAIVASLE IIRRGIWNFF RLENEHLNNV GKYRAFKSVP
801: LPFNYDEDDD KDN

Arabidopsis Description

PHO1;H3Phosphate transporter PHO1 homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.