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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71691 Canola endoplasmic reticulum, extracellular, plasma membrane 62.22 82.35
CDY58360 Canola endoplasmic reticulum, plasma membrane 63.33 78.62
CDX76897 Canola mitochondrion 43.89 65.83
CDX82438 Canola cytosol 72.22 64.36
CDY22918 Canola cytosol 72.22 56.03
CDX98567 Canola golgi, nucleus, plasma membrane 44.44 39.22
KRH26831 Soybean plasma membrane 37.78 30.22
PGSC0003DMT400071614 Potato golgi, plasma membrane, plastid 41.11 27.01
CDX84739 Canola plasma membrane, plastid 56.11 21.77
CDY65458 Canola plasma membrane, plastid 54.44 21.08
AT2G32295.2 Thale cress plasma membrane 49.44 19.22
VIT_12s0059g02490.t01 Wine grape plastid 41.67 15.89
Solyc04g080050.2.1 Tomato golgi, peroxisome, plasma membrane, plastid 41.11 15.64
CDY33680 Canola golgi, plasma membrane, plastid 39.44 15.4
CDX74638 Canola golgi, plasma membrane, plastid 38.89 15.35
Os12t0595000-01 Rice plasma membrane 35.56 15.17
EES17313 Sorghum plasma membrane 35.0 14.93
TraesCS5A01G062900.1 Wheat plasma membrane 35.0 14.86
TraesCS5B01G070200.1 Wheat plasma membrane 35.0 14.86
TraesCS5D01G074100.1 Wheat plasma membrane 35.0 14.86
Solyc07g022830.2.1 Tomato golgi, plasma membrane, plastid 37.78 14.75
TraesCS7D01G365900.3 Wheat plasma membrane 34.44 14.32
TraesCS7B01G271100.2 Wheat plasma membrane 34.44 14.32
TraesCS7A01G356800.1 Wheat plasma membrane 34.44 14.32
GSMUA_Achr7P00360_001 Banana plasma membrane 37.78 14.32
KRH22527 Soybean plasma membrane 37.22 14.23
Zm00001d030939_P004 Maize plasma membrane 35.56 14.1
Zm00001d041383_P002 Maize plasma membrane 35.0 13.88
GSMUA_Achr4P23610_001 Banana plasma membrane 36.67 13.84
HORVU5Hr1G016790.15 Barley peroxisome, plastid 35.0 12.55
PGSC0003DMT400080869 Potato golgi, peroxisome, plasma membrane 22.78 9.07
CDX84740 Canola plasma membrane 7.78 4.52
CDY36431 Canola cytosol 5.0 4.11
CDY33783 Canola cytosol, peroxisome, plasma membrane 11.11 3.58
CDY39346 Canola plasma membrane 7.78 3.44
CDX85098 Canola cytosol, peroxisome, plasma membrane 10.56 3.37
CDY45171 Canola cytosol, peroxisome, plasma membrane 10.56 2.99
CDY72508 Canola golgi, peroxisome 7.22 2.91
CDY04142 Canola cytosol, nucleus, plasma membrane 12.78 2.85
CDY09011 Canola cytosol, peroxisome, plasma membrane 9.44 2.84
CDX82870 Canola cytosol 11.67 2.81
CDY64495 Canola cytosol 12.22 2.81
CDY46445 Canola cytosol 11.67 2.81
CDX92696 Canola cytosol, peroxisome, plasma membrane 11.11 2.75
CDY18123 Canola cytosol 11.67 2.75
CDY56002 Canola cytosol 5.0 2.75
CDY65467 Canola cytosol 11.67 2.72
CDY56000 Canola cytosol 11.11 2.7
CDY44412 Canola cytosol, nucleus, plasma membrane 11.67 2.67
CDY52351 Canola cytosol, peroxisome, plasma membrane 10.56 2.65
CDY00103 Canola nucleus, peroxisome, plasma membrane 11.67 2.63
CDY19999 Canola cytosol, nucleus, plasma membrane 11.67 2.63
CDY04143 Canola cytosol 11.67 2.61
CDY08975 Canola cytosol, peroxisome, plasma membrane 10.56 2.6
CDX77515 Canola cytosol 11.67 2.59
CDY45175 Canola cytosol, nucleus, plasma membrane 11.11 2.58
CDY16128 Canola cytosol 11.11 2.56
CDX95933 Canola cytosol 11.11 2.55
CDY56003 Canola plasma membrane 8.33 2.55
CDX98143 Canola cytosol 11.11 2.52
CDY58396 Canola cytosol 10.0 2.44
CDY03011 Canola cytosol, nucleus, plasma membrane 10.56 2.44
CDY16184 Canola cytosol 10.0 2.43
CDY36429 Canola cytosol, peroxisome, plasma membrane 11.11 2.42
CDY03007 Canola cytosol 10.56 2.38
CDY07366 Canola cytosol 10.0 2.26
CDY45174 Canola cytosol, peroxisome, plasma membrane 10.0 2.25
CDY09339 Canola cytosol 10.0 2.2
CDY37178 Canola cytosol 10.0 2.2
CDY40927 Canola cytosol 9.44 2.17
CDY16129 Canola cytosol 8.89 2.1
CDX81539 Canola cytosol 8.89 2.08
CDY54499 Canola cytosol 8.89 2.08
CDY09013 Canola nucleus 2.22 2.02
CDY33781 Canola cytosol 8.33 1.98
CDY03008 Canola cytosol, peroxisome, plasma membrane 8.33 1.97
CDY38614 Canola cytosol 8.33 1.95
CDX95992 Canola cytosol 8.33 1.95
CDY04252 Canola cytosol 8.33 1.95
CDY04052 Canola nucleus 6.67 1.85
KRH30768 Soybean golgi, plasma membrane 1.67 1.38
CDY60937 Canola cytosol, nucleus, plasma membrane 12.22 1.31
CDY04251 Canola endoplasmic reticulum, mitochondrion 0.56 1.18
CDY52794 Canola nucleus 1.11 0.7
CDY71475 Canola extracellular, golgi, plasma membrane 0.56 0.37
CDY45173 Canola cytosol, golgi, peroxisome 0.0 0.0
CDY44990 Canola extracellular, golgi 0.0 0.0
OQU79488 Sorghum golgi, plasma membrane 0.0 0.0
KRH26830 Soybean endoplasmic reticulum, golgi 0.0 0.0
Protein Annotations
KEGG:00230+1.17.4.1KEGG:00240+1.17.4.1KEGG:00480+1.17.4.1KEGG:00983+1.17.4.1Gene3D:1.10.620.20MapMan:35.1
GO:A0A078D0R6EnsemblPlants:CDX81844ProteinID:CDX81844ProteinID:CDX81844.1InterPro:Ferritin-like_SFGO:GO:0003674
GO:GO:0003824GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009186GO:GO:0009987
GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00136790001InterPro:IPR012348PFAM:PF00268PANTHER:PTHR23409
PANTHER:PTHR23409:SF31MetaCyc:PWY-6545MetaCyc:PWY-7184MetaCyc:PWY-7198MetaCyc:PWY-7210MetaCyc:PWY-7220
MetaCyc:PWY-7222MetaCyc:PWY-7226MetaCyc:PWY-7227InterPro:RNR-likeInterPro:RNR_small_famSUPFAM:SSF47240
TMHMM:TMhelixUniPathway:UPA00326UniParc:UPI0004EDB192:::
Description
BnaC08g37570D
Coordinates
chrLK031826:+:1083444..1084640
Molecular Weight (calculated)
20582.5 Da
IEP (calculated)
6.095
GRAVY (calculated)
0.410
Length
180 amino acids
Sequence
(BLAST)
001: MKLTEERVKS IVCDAVEIER EFVCDALPCA LVWMTRELMS QYIESVGDRL LGALGYGKVY GVANPELVTT RKLLLCLASV ALYVGGLYIC GKIGWESVMK
101: MGQDTRELFF NETFLYYNPL LLITMMVWLW DHHSHKEIWK CARWMTTIIL TSMTAYLYLY SHGDVSLAAS QPVLFCISLL
Best Arabidopsis Sequence Match ( AT2G32295.1 )
(BLAST)
001: MFGGVLSMPV NNPHLRKSGS RHIVTNLGDN DLKTASMLLS TYAKLQTPIF LRSLKVALYI GGLYVCGKVG LESVMKMGVE TRELFFYETF LYYNPLLLIT
101: LMVWLWGVNL WVFSRSGVDY AAIFYLGSDH LSHREIWKCA RWMTIIILTS MTAYLYLYSH GDVKLAASQP VVLYFSAVII LIIPFNIFYM SSRYYLLWTF
201: WRILFPVHAV TFSDFFLADI LTSMSKVLSD LERSVCRMVH RQVATVAWFE ADSVCGSHSA AIPLVLVLPY LFRLFQCIRQ YKDSKDIANI YNAGKYLTAV
301: PVIFLSALKY YIDPDTWTYS IQPAWILSGL ANTFFSFFWD ILRDWDLSVF TRIFKFTRPN LFSHLLYGRR WVYVWVIGSN LVLRWTWTYK LSAHLRNNYI
401: TVFIITALEI YRRFQWAFFR IENVWYKINN PKHTAHQSNP LSLQHDIDSE HEKLLAHSHS PGV
Arabidopsis Description
EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:F4ISV2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.