Factsheet for PGSC0003DMT400080869

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

plastid 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g022830.2.1	Tomato	golgi, plasma membrane, plastid	83.41	81.78
KRH26830	Soybean	endoplasmic reticulum, golgi	39.6	77.83
KRH30768	Soybean	golgi, plasma membrane	37.17	77.06
VIT_12s0059g02490.t01	Wine grape	plastid	72.12	69.07
OQU79488	Sorghum	golgi, plasma membrane	32.52	67.43
TraesCS5A01G062900.1	Wheat	plasma membrane	61.95	66.04
TraesCS5B01G070200.1	Wheat	plasma membrane	61.73	65.8
TraesCS5D01G074100.1	Wheat	plasma membrane	61.5	65.57
KRH22527	Soybean	plasma membrane	67.48	64.76
EES17313	Sorghum	plasma membrane	60.18	64.45
PGSC0003DMT400071614	Potato	golgi, plasma membrane, plastid	38.72	63.87
Os12t0595000-01	Rice	plasma membrane	59.29	63.51
TraesCS7A01G356800.1	Wheat	plasma membrane	59.73	62.36
GSMUA_Achr7P00360_001	Banana	plasma membrane	65.27	62.11
TraesCS7B01G271100.2	Wheat	plasma membrane	59.29	61.89
TraesCS7D01G365900.3	Wheat	plasma membrane	59.29	61.89
Zm00001d041383_P002	Maize	plasma membrane	60.4	60.13
GSMUA_Achr4P23610_001	Banana	plasma membrane	63.27	59.96
Zm00001d030939_P004	Maize	plasma membrane	60.18	59.91
CDX84740	Canola	plasma membrane	38.72	56.45
HORVU5Hr1G016790.15	Barley	peroxisome, plastid	62.39	56.18
Bra022884.1-P	Field mustard	plasma membrane	54.65	54.77
AT2G32295.2	Thale cress	plasma membrane	55.31	54.0
CDX84739	Canola	plasma membrane, plastid	54.87	53.45
CDY65458	Canola	plasma membrane, plastid	54.42	52.9
KRH26831	Soybean	plasma membrane	25.22	50.67
CDX98567	Canola	golgi, nucleus, plasma membrane	18.58	41.18
CDY58360	Canola	endoplasmic reticulum, plasma membrane	10.4	32.41
CDY71691	Canola	endoplasmic reticulum, extracellular, plasma membrane	9.73	32.35
CDX82438	Canola	cytosol	12.39	27.72
Bra012265.1-P	Field mustard	cytosol	12.17	25.82
CDY22918	Canola	cytosol	12.83	25.0
CDX76897	Canola	mitochondrion	6.42	24.17
CDX81844	Canola	cytosol	9.07	22.78
PGSC0003DMT400003629	Potato	cytosol	23.23	13.71
PGSC0003DMT400073008	Potato	cytosol	22.12	12.82
PGSC0003DMT400044207	Potato	cytosol, nucleus, plasma membrane	22.35	12.78
PGSC0003DMT400091701	Potato	cytosol	20.58	12.7
PGSC0003DMT400064691	Potato	cytosol, nucleus, plasma membrane	17.7	11.99

Protein Annotations

EnsemblPlants:PGSC0003DMT400080869	EnsemblPlantsGene:PGSC0003DMG400031494	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:EXS_C
InterPro:IPR004342	PANTHER:PTHR10783	PANTHER:PTHR10783:SF46	PFAM:PF03124	PFscan:PS51380	PGSC:PGSC0003DMG400031494
SEG:seg	TMHMM:TMhelix	UniParc:UPI000296FB30	UniProt:M1D430	MapMan:35.1	:

Description

Small molecule transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400031494]

Coordinates

chr7:-:28777642..28783325

Molecular Weight (calculated)

53129.7 Da

IEP (calculated)

9.276

GRAVY (calculated)

0.182

Length

452 amino acids

Sequence
(BLAST)

001: MDSPANSPHL RKSGSRLVVS DFGTLEPGSV FEEALLHSIE AKATVSTPPS TTTIIPSPLL LWRLKISWDS VMRMSVNLRD LFLYEAFLYY NPLLLVTIMV
101: WFWGMNLWVF AQANVNFPKI FDLDQNHLSH REIWKVLLYA AFAMALIFPF HIFYLSSRYF LLRTLWRIVF PLQASLRYLN VYNKKRADLV NQKIFSTLPV
201: AIAFADFFLA DILTSMSKVF SDLERSVCRM VHRQVATIAW FEADSVCGSH SVAIPIVLVL PYLFRLFQCL RQYKDTRDKT TLFNALKYST AVPVIFVSAL
301: KYHVFPDNWV NLYRPLWLVS AVVNCLYSFY WDLTRDWDLS CFTLVFKFNK PHILSHCLYG RKWVYFWVIG SNLILRCTWT YKLSAHLRHN YLTVFTITAL
401: EMFRRFQWVF FRVENEWNKI STKSSNTQLY MGDVPKQEEE EEELLNSNGH NV

Best Arabidopsis Sequence Match ( AT5G35730.1 )
(BLAST)

001: MFENPASNSP HLRKSSSKSV FIDPGLNGHL GEMGDLKGSN SPLHITTMVP SPIFLWRFKV VLFLFWALCC CKIGWDSVMR MSIDLRDLFL YEAFLYYNPL
101: LLVTMMVWLW GVNLWVFSQG SVNYSKVFDL DHNHLTHREM WKCSMWMTII VPTSMTAYLY LYSHGEVSLA ASQPVLLYIA FALVLIFPFD IFYLSSRYFL
201: LRTLWRIAFP LQPITFPDFF LADILTSMVK VFSDLERSVC RMVHRQVATI AWFEADAVCG SHQIAIPLVL VFPYICRLLQ CLRQYKDTKE KSSLLNALKY
301: STAVPVIFLS ALKYHVMPES WTSFYRPLWL FSSVINSLYS FYWDVTRDWD LSGFTKIFKF SRPSTISNLL YGRQWVYFWV IGSNLVLRCA WTYKLSAHLR
401: HNYITVFTMT AMEMLRRFQW VFFRVENEWN KITKSHPMGE ISLEEDKLLG STTPHDV

Arabidopsis Description

EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:Q8VYS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.