Skip to main content
crop-pal logo
Barley
Search for another protein from :
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid

Predictor Summary:
  • peroxisome 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plastid
Any Predictor:peroxisome, plastid
MultiLoc:peroxisome
TargetP:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G062900.1 Wheat plasma membrane 81.08 95.99
TraesCS5B01G070200.1 Wheat plasma membrane 81.08 95.99
TraesCS5D01G074100.1 Wheat plasma membrane 80.68 95.52
EES17313 Sorghum plasma membrane 75.1 89.34
Os12t0595000-01 Rice plasma membrane 74.9 89.1
OQU79488 Sorghum golgi, plasma membrane 37.05 85.32
Zm00001d030939_P004 Maize plasma membrane 75.7 83.7
Zm00001d041383_P002 Maize plasma membrane 75.1 83.04
KRH26830 Soybean endoplasmic reticulum, golgi 34.06 74.35
KRH00677 Soybean plasma membrane 60.56 72.38
KRH40514 Soybean plasma membrane 60.16 71.9
KRH30768 Soybean golgi, plasma membrane 30.48 70.18
VIT_12s0059g02490.t01 Wine grape plastid 65.94 70.13
CDX74638 Canola golgi, plasma membrane, plastid 63.55 69.96
Bra035386.1-P Field mustard golgi, plasma membrane, plastid 63.55 69.96
Solyc04g080050.2.1 Tomato golgi, peroxisome, plasma membrane, plastid 65.74 69.77
GSMUA_Achr7P00360_001 Banana plasma membrane 65.54 69.26
CDY33680 Canola golgi, plasma membrane, plastid 63.35 68.98
GSMUA_Achr4P23610_001 Banana plasma membrane 65.14 68.55
AT5G35730.1 Thale cress plastid 62.35 68.49
Solyc07g022830.2.1 Tomato golgi, plasma membrane, plastid 61.35 66.81
KRH22527 Soybean plasma membrane 61.75 65.82
PGSC0003DMT400071614 Potato golgi, plasma membrane, plastid 34.06 62.41
PGSC0003DMT400080869 Potato golgi, peroxisome, plasma membrane 56.18 62.39
KRH26831 Soybean plasma membrane 26.29 58.67
AT2G32295.2 Thale cress plasma membrane 52.19 56.59
Bra022884.1-P Field mustard plasma membrane 50.4 56.1
CDX84739 Canola plasma membrane, plastid 51.0 55.17
CDY65458 Canola plasma membrane, plastid 50.8 54.84
CDX84740 Canola plasma membrane 33.07 53.55
CDY71691 Canola endoplasmic reticulum, extracellular, plasma membrane 14.34 52.94
CDY58360 Canola endoplasmic reticulum, plasma membrane 14.54 50.34
CDX98567 Canola golgi, nucleus, plasma membrane 19.72 48.53
CDX76897 Canola mitochondrion 11.55 48.33
CDX81844 Canola cytosol 12.55 35.0
CDX82438 Canola cytosol 13.55 33.66
CDY22918 Canola cytosol 14.74 31.9
Bra012265.1-P Field mustard cytosol 13.35 31.46
HORVU6Hr1G089130.9 Barley cytosol 21.31 13.23
HORVU6Hr1G089190.23 Barley cytosol 21.12 13.1
HORVU7Hr1G047210.9 Barley cytosol, peroxisome, plasma membrane 21.71 12.4
Protein Annotations
EnsemblPlants:HORVU5Hr1G016790.15EnsemblPlantsGene:HORVU5Hr1G016790GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005794GO:GO:0016020GO:GO:0016021InterPro:EXS_CInterPro:IPR004342PANTHER:PTHR10783
PANTHER:PTHR10783:SF46PFAM:PF03124PFscan:PS51380SEG:segTMHMM:TMhelixUniParc:UPI000B46F9E9
UniProt:A0A287QGQ8MapMan:35.1::::
Description
No Description!
Coordinates
chrchr5H:-:63229204..63233835
Molecular Weight (calculated)
57373.3 Da
IEP (calculated)
9.684
GRAVY (calculated)
0.233
Length
502 amino acids
Sequence
(BLAST)
001: ARDLAVPCHA AGLPGEPEGP APAPARRTAR HGSSSLPCPD RRRHALSILG YVRGRRRLCD RVRARRARAG VDMKGVSSIP AAAIIPSXXX XXXRSSSGGS
101: RVILFLLWGL CCCKIGWDSV MRMSVDLRDL FLYEAFLYYN PLLLVALMIW LWGINLWVFA QSSVNYAKVF DLPQTHLSHR EIWRCATWLT LIVPTSMTAY
201: LYLYSHGEVS LAASQPVLLY AILLMILLSP FDMFYLSSRF FFLRTMWRII LPLQAITFPD FFMADIFTSM SKVFSDLERS GCRMVHRQVA TIAWFEADSI
301: CGSHSVAIPL VLVLPYLCRF FQCLRQYKDT KEKTCLLNAL KYSTAVPVIF LSALKYHVFP DVWISFYRPL WLISSVVNSL YSFYWDIKRD WDLSILTRIF
401: MFKNPSAWSN LLYGRSWVFY WVLGSNLILR CTWTYKLSAH LRHNYLTVFA ITALEMVRRF QWVFFRVENE WNKMTAKQNF EMSSDMLPSE ADRLLDSNSH
501: TV
Best Arabidopsis Sequence Match ( AT5G35730.1 )
(BLAST)
001: MFENPASNSP HLRKSSSKSV FIDPGLNGHL GEMGDLKGSN SPLHITTMVP SPIFLWRFKV VLFLFWALCC CKIGWDSVMR MSIDLRDLFL YEAFLYYNPL
101: LLVTMMVWLW GVNLWVFSQG SVNYSKVFDL DHNHLTHREM WKCSMWMTII VPTSMTAYLY LYSHGEVSLA ASQPVLLYIA FALVLIFPFD IFYLSSRYFL
201: LRTLWRIAFP LQPITFPDFF LADILTSMVK VFSDLERSVC RMVHRQVATI AWFEADAVCG SHQIAIPLVL VFPYICRLLQ CLRQYKDTKE KSSLLNALKY
301: STAVPVIFLS ALKYHVMPES WTSFYRPLWL FSSVINSLYS FYWDVTRDWD LSGFTKIFKF SRPSTISNLL YGRQWVYFWV IGSNLVLRCA WTYKLSAHLR
401: HNYITVFTMT AMEMLRRFQW VFFRVENEWN KITKSHPMGE ISLEEDKLLG STTPHDV
Arabidopsis Description
EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:Q8VYS9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.