Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035386.1-P | Field mustard | golgi, plasma membrane, plastid | 98.48 | 99.56 |
| CDX74638 | Canola | golgi, plasma membrane, plastid | 98.48 | 99.56 |
| AT5G35730.1 | Thale cress | plastid | 94.58 | 95.4 |
| KRH00677 | Soybean | plasma membrane | 73.32 | 80.48 |
| KRH40514 | Soybean | plasma membrane | 73.32 | 80.48 |
| Os12t0595000-01 | Rice | plasma membrane | 68.55 | 74.88 |
| TraesCS5A01G062900.1 | Wheat | plasma membrane | 68.76 | 74.76 |
| TraesCS5D01G074100.1 | Wheat | plasma membrane | 68.55 | 74.53 |
| TraesCS5B01G070200.1 | Wheat | plasma membrane | 68.33 | 74.29 |
| EES17313 | Sorghum | plasma membrane | 67.68 | 73.93 |
| TraesCS7A01G356800.1 | Wheat | plasma membrane | 68.33 | 72.75 |
| TraesCS7D01G365900.3 | Wheat | plasma membrane | 68.33 | 72.75 |
| TraesCS7B01G271100.2 | Wheat | plasma membrane | 68.11 | 72.52 |
| GSMUA_Achr7P00360_001 | Banana | plasma membrane | 73.32 | 71.16 |
| GSMUA_Achr4P23610_001 | Banana | plasma membrane | 72.45 | 70.02 |
| Zm00001d030939_P004 | Maize | plasma membrane | 67.46 | 68.5 |
| Zm00001d041383_P002 | Maize | plasma membrane | 67.25 | 68.28 |
| OQU79488 | Sorghum | golgi, plasma membrane | 32.1 | 67.89 |
| HORVU5Hr1G016790.15 | Barley | peroxisome, plastid | 68.98 | 63.35 |
| CDX84739 | Canola | plasma membrane, plastid | 60.52 | 60.13 |
| CDY65458 | Canola | plasma membrane, plastid | 60.3 | 59.78 |
| CDY71691 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.92 | 57.35 |
| CDX98567 | Canola | golgi, nucleus, plasma membrane | 24.73 | 55.88 |
| CDY58360 | Canola | endoplasmic reticulum, plasma membrane | 17.35 | 55.17 |
| CDX84740 | Canola | plasma membrane | 36.88 | 54.84 |
| CDX76897 | Canola | mitochondrion | 12.15 | 46.67 |
| CDX81844 | Canola | cytosol | 15.4 | 39.44 |
| CDX82438 | Canola | cytosol | 16.49 | 37.62 |
| CDY22918 | Canola | cytosol | 17.57 | 34.91 |
| CDY71475 | Canola | extracellular, golgi, plasma membrane | 18.0 | 30.74 |
| CDY44990 | Canola | extracellular, golgi | 4.77 | 28.57 |
| CDY45173 | Canola | cytosol, golgi, peroxisome | 9.98 | 25.84 |
| CDY39346 | Canola | plasma membrane | 20.82 | 23.59 |
| CDY04251 | Canola | endoplasmic reticulum, mitochondrion | 4.12 | 22.35 |
| CDY72508 | Canola | golgi, peroxisome | 20.82 | 21.52 |
| CDX85098 | Canola | cytosol, peroxisome, plasma membrane | 23.86 | 19.5 |
| CDY09011 | Canola | cytosol, peroxisome, plasma membrane | 22.34 | 17.22 |
| CDY56003 | Canola | plasma membrane | 21.91 | 17.15 |
| CDY04052 | Canola | nucleus | 24.08 | 17.1 |
| CDY58396 | Canola | cytosol | 24.51 | 15.31 |
| CDY16184 | Canola | cytosol | 24.51 | 15.27 |
| CDX92696 | Canola | cytosol, peroxisome, plasma membrane | 23.64 | 15.01 |
| CDY16129 | Canola | cytosol | 24.51 | 14.83 |
| CDY33781 | Canola | cytosol | 24.3 | 14.81 |
| CDX95992 | Canola | cytosol | 24.73 | 14.81 |
| CDY38614 | Canola | cytosol | 24.73 | 14.81 |
| CDX82870 | Canola | cytosol | 23.86 | 14.73 |
| CDY54499 | Canola | cytosol | 24.51 | 14.68 |
| CDX95933 | Canola | cytosol | 24.95 | 14.67 |
| CDY03008 | Canola | cytosol, peroxisome, plasma membrane | 24.08 | 14.61 |
| CDY18123 | Canola | cytosol | 24.08 | 14.55 |
| CDX81539 | Canola | cytosol | 24.3 | 14.55 |
| CDY19999 | Canola | cytosol, nucleus, plasma membrane | 25.16 | 14.54 |
| CDY08975 | Canola | cytosol, peroxisome, plasma membrane | 22.99 | 14.52 |
| CDY52351 | Canola | cytosol, peroxisome, plasma membrane | 22.56 | 14.48 |
| CDY46445 | Canola | cytosol | 23.43 | 14.44 |
| CDY04252 | Canola | cytosol | 24.08 | 14.4 |
| CDY44412 | Canola | cytosol, nucleus, plasma membrane | 24.51 | 14.36 |
| CDY40927 | Canola | cytosol | 24.3 | 14.3 |
| CDY00103 | Canola | nucleus, peroxisome, plasma membrane | 24.73 | 14.29 |
| CDY07366 | Canola | cytosol | 24.51 | 14.16 |
| CDY56000 | Canola | cytosol | 22.56 | 14.02 |
| CDY45174 | Canola | cytosol, peroxisome, plasma membrane | 24.3 | 14.0 |
| CDY65467 | Canola | cytosol | 23.43 | 13.99 |
| CDX77515 | Canola | cytosol | 24.51 | 13.92 |
| CDY64495 | Canola | cytosol | 23.43 | 13.79 |
| CDY03007 | Canola | cytosol | 23.86 | 13.78 |
| CDY04142 | Canola | cytosol, nucleus, plasma membrane | 23.86 | 13.63 |
| CDX98143 | Canola | cytosol | 23.43 | 13.6 |
| CDY16128 | Canola | cytosol | 22.99 | 13.59 |
| CDY37178 | Canola | cytosol | 24.08 | 13.59 |
| CDY09339 | Canola | cytosol | 24.08 | 13.59 |
| CDY04143 | Canola | cytosol | 23.64 | 13.52 |
| CDY45175 | Canola | cytosol, nucleus, plasma membrane | 22.13 | 13.14 |
| CDY36429 | Canola | cytosol, peroxisome, plasma membrane | 23.43 | 13.09 |
| CDY03011 | Canola | cytosol, nucleus, plasma membrane | 22.13 | 13.08 |
| CDY45171 | Canola | cytosol, peroxisome, plasma membrane | 14.1 | 10.24 |
| CDY60937 | Canola | cytosol, nucleus, plasma membrane | 23.86 | 6.53 |
| CDY33783 | Canola | cytosol, peroxisome, plasma membrane | 7.81 | 6.44 |
| CDY36431 | Canola | cytosol | 2.82 | 5.94 |
| CDY56002 | Canola | cytosol | 3.25 | 4.59 |
| CDY09013 | Canola | nucleus | 1.74 | 4.04 |
| CDY52794 | Canola | nucleus | 1.08 | 1.76 |
Protein Annotations
| EnsemblPlants:CDY33680 | EnsemblPlantsGene:GSBRNA2T00055056001 | GO:A0A078H506 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:EXS_C | InterPro:IPR004342 | PANTHER:PTHR10783 | PANTHER:PTHR10783:SF46 | PFAM:PF03124 | PFscan:PS51380 |
| ProteinID:CDY33680 | ProteinID:CDY33680.1 | TMHMM:TMhelix | UniParc:UPI0004EC6263 | UniProt:A0A078H506 | MapMan:35.1 |
Description
BnaC04g29710DBnaC04g29710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H506]
Coordinates
chrLK032320:-:16667..20316
Molecular Weight (calculated)
53746.8 Da
IEP (calculated)
8.827
GRAVY (calculated)
0.311
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MFENPVTSSP HLRKSGSKSL FLDPGVSGHL GGASEMGGDL KGSSSPLQIT TMVPSPIFLW RFKVVLFLFW ALCCCKIGWD SVMRMSIDLR DLFLYEAFLY
101: YNPLLLVTMM VWLWGVNLWV FSQGSVNYAK VFDLDHNHLT HREMWKCSMW MTIIVPTSMT AYLYLYSHGE VSLAASQPVL LYIAFALVLI FPFDIFYLSS
201: RYFLLRTLWR IAFPLQPITF PDFFLADILT SMVKVFSDLE RSVCRMVHRQ VATIAWFEAD AVCGSHQIAI PLVLVFPYIC RLLQCLRQYK DTKEKSSLLN
301: ALKYSTAVPV IFLSALKYHV MPESWTSFYR PLWLFSSVIN SLYSFYWDVT RDWDLSGFTK IFKFSRPSNI SYLLYGRQWV YFWVIGSNLV LRCAWTYKLS
401: AHLRHNYITV FAVTAMEMFR RFQWVFFRVE NEWNKITKSH PLAEISLEED KLLGSATTHD V
101: YNPLLLVTMM VWLWGVNLWV FSQGSVNYAK VFDLDHNHLT HREMWKCSMW MTIIVPTSMT AYLYLYSHGE VSLAASQPVL LYIAFALVLI FPFDIFYLSS
201: RYFLLRTLWR IAFPLQPITF PDFFLADILT SMVKVFSDLE RSVCRMVHRQ VATIAWFEAD AVCGSHQIAI PLVLVFPYIC RLLQCLRQYK DTKEKSSLLN
301: ALKYSTAVPV IFLSALKYHV MPESWTSFYR PLWLFSSVIN SLYSFYWDVT RDWDLSGFTK IFKFSRPSNI SYLLYGRQWV YFWVIGSNLV LRCAWTYKLS
401: AHLRHNYITV FAVTAMEMFR RFQWVFFRVE NEWNKITKSH PLAEISLEED KLLGSATTHD V
001: MFENPASNSP HLRKSSSKSV FIDPGLNGHL GEMGDLKGSN SPLHITTMVP SPIFLWRFKV VLFLFWALCC CKIGWDSVMR MSIDLRDLFL YEAFLYYNPL
101: LLVTMMVWLW GVNLWVFSQG SVNYSKVFDL DHNHLTHREM WKCSMWMTII VPTSMTAYLY LYSHGEVSLA ASQPVLLYIA FALVLIFPFD IFYLSSRYFL
201: LRTLWRIAFP LQPITFPDFF LADILTSMVK VFSDLERSVC RMVHRQVATI AWFEADAVCG SHQIAIPLVL VFPYICRLLQ CLRQYKDTKE KSSLLNALKY
301: STAVPVIFLS ALKYHVMPES WTSFYRPLWL FSSVINSLYS FYWDVTRDWD LSGFTKIFKF SRPSTISNLL YGRQWVYFWV IGSNLVLRCA WTYKLSAHLR
401: HNYITVFTMT AMEMLRRFQW VFFRVENEWN KITKSHPMGE ISLEEDKLLG STTPHDV
101: LLVTMMVWLW GVNLWVFSQG SVNYSKVFDL DHNHLTHREM WKCSMWMTII VPTSMTAYLY LYSHGEVSLA ASQPVLLYIA FALVLIFPFD IFYLSSRYFL
201: LRTLWRIAFP LQPITFPDFF LADILTSMVK VFSDLERSVC RMVHRQVATI AWFEADAVCG SHQIAIPLVL VFPYICRLLQ CLRQYKDTKE KSSLLNALKY
301: STAVPVIFLS ALKYHVMPES WTSFYRPLWL FSSVINSLYS FYWDVTRDWD LSGFTKIFKF SRPSTISNLL YGRQWVYFWV IGSNLVLRCA WTYKLSAHLR
401: HNYITVFTMT AMEMLRRFQW VFFRVENEWN KITKSHPMGE ISLEEDKLLG STTPHDV
Arabidopsis Description
EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:Q8VYS9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.