CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52351	Canola	cytosol, peroxisome, plasma membrane	82.64	83.57
CDY08975	Canola	cytosol, peroxisome, plasma membrane	84.02	83.56
AT4G25350.1	Thale cress	cytosol	79.75	77.72
CDY44990	Canola	extracellular, golgi	7.99	75.32
CDX82870	Canola	cytosol	66.67	64.79
CDY46445	Canola	cytosol	66.39	64.44
CDY71475	Canola	extracellular, golgi, plasma membrane	23.83	64.07
CDY58396	Canola	cytosol	64.6	63.55
CDY16184	Canola	cytosol	64.6	63.38
CDY39346	Canola	plasma membrane	33.75	60.2
CDY45173	Canola	cytosol, golgi, peroxisome	14.74	60.11
CDY56003	Canola	plasma membrane	45.87	56.54
CDY72508	Canola	golgi, peroxisome	34.3	55.83
CDY33781	Canola	cytosol	56.34	54.1
CDY16129	Canola	cytosol	56.2	53.54
CDY04251	Canola	endoplasmic reticulum, mitochondrion	6.2	52.94
CDX98143	Canola	cytosol	56.34	51.51
CDY03008	Canola	cytosol, peroxisome, plasma membrane	53.17	50.79
CDY04143	Canola	cytosol	56.34	50.74
CDY04052	Canola	nucleus	44.9	50.23
CDY03007	Canola	cytosol	54.96	50.0
CDY04142	Canola	cytosol, nucleus, plasma membrane	55.51	49.94
CDY16128	Canola	cytosol	53.58	49.87
CDY36429	Canola	cytosol, peroxisome, plasma membrane	56.47	49.7
CDY09339	Canola	cytosol	55.92	49.69
CDY37178	Canola	cytosol	55.92	49.69
CDY45175	Canola	cytosol, nucleus, plasma membrane	53.03	49.61
CDY03011	Canola	cytosol, nucleus, plasma membrane	52.89	49.23
CDY45174	Canola	cytosol, peroxisome, plasma membrane	53.99	49.0
CDY65467	Canola	cytosol	51.79	48.7
CDY64495	Canola	cytosol	52.2	48.4
CDX95933	Canola	cytosol	51.38	47.58
CDY40927	Canola	cytosol	50.28	46.62
CDY45171	Canola	cytosol, peroxisome, plasma membrane	40.77	46.61
CDY56000	Canola	cytosol	46.97	45.96
CDY44412	Canola	cytosol, nucleus, plasma membrane	48.76	44.98
CDY33783	Canola	cytosol, peroxisome, plasma membrane	33.47	43.47
CDY19999	Canola	cytosol, nucleus, plasma membrane	47.25	42.98
CDY00103	Canola	nucleus, peroxisome, plasma membrane	46.97	42.73
CDY09011	Canola	cytosol, peroxisome, plasma membrane	28.65	34.78
CDX85098	Canola	cytosol, peroxisome, plasma membrane	26.03	33.51
CDY56002	Canola	cytosol	14.46	32.11
CDX77515	Canola	cytosol	34.57	30.91
CDX95992	Canola	cytosol	32.64	30.78
CDY38614	Canola	cytosol	32.37	30.52
CDY54499	Canola	cytosol	32.37	30.52
CDY04252	Canola	cytosol	32.37	30.48
CDX81539	Canola	cytosol	31.96	30.13
CDY07366	Canola	cytosol	32.51	29.57
CDY18123	Canola	cytosol	29.75	28.31
CDY36431	Canola	cytosol	8.26	27.4
CDY60937	Canola	cytosol, nucleus, plasma membrane	56.34	24.29
CDX74638	Canola	golgi, plasma membrane, plastid	14.88	23.68
CDY33680	Canola	golgi, plasma membrane, plastid	15.01	23.64
CDX84740	Canola	plasma membrane	9.78	22.9
CDX84739	Canola	plasma membrane, plastid	14.46	22.63
CDY65458	Canola	plasma membrane, plastid	14.33	22.37
CDY09013	Canola	nucleus	6.06	22.22
CDX98567	Canola	golgi, nucleus, plasma membrane	5.1	18.14
CDY52794	Canola	nucleus	6.75	17.25
CDY58360	Canola	endoplasmic reticulum, plasma membrane	2.75	13.79
CDX76897	Canola	mitochondrion	2.07	12.5
CDY71691	Canola	endoplasmic reticulum, extracellular, plasma membrane	2.34	12.5
CDX82438	Canola	cytosol	3.44	12.38
CDY22918	Canola	cytosol	3.58	11.21
CDX81844	Canola	cytosol	2.75	11.11

Protein Annotations

MapMan:24.2.7.4	MapMan:25.3.2.2	GO:A0A078DTU7	EnsemblPlants:CDX92696	ProteinID:CDX92696	ProteinID:CDX92696.1
ncoils:Coil	InterPro:EXS_C	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00154509001
InterPro:IPR004331	InterPro:IPR004342	PFAM:PF03105	PFAM:PF03124	InterPro:PHO1_SPX	PFscan:PS51380
PFscan:PS51382	PANTHER:PTHR10783	PANTHER:PTHR10783:SF43	InterPro:SPX_dom	TMHMM:TMhelix	UniParc:UPI0004EE06F7
SEG:seg	:	:	:	:	:

Description

BnaC07g39540D

Coordinates

chrLK031873:-:355983..362143

Molecular Weight (calculated)

84733.1 Da

IEP (calculated)

9.812

GRAVY (calculated)

-0.042

Length

726 amino acids

Sequence
(BLAST)

001: MRFGKEFVSK MIPEWQETYI DYAYLKIILQ DIQTSRNISV SNNQMKTSFA RNLTRRYNCD ASVSESHDIV VNTVTHAGNE SRMIYQTAFS KAGELGGDTE
101: VVFFRTLDQE FNKVNRFYRS EVEKARDEAL ALNKQMDALV AFRLRVMEKK HSLSDSVFVD INAFTSEIGS SSKSKEHTNQ SVLERIRMNK TRETPLSTIK
201: TILKVHKHEE ELRFTRENLK KAEKLLQIAF IEFYQKLGHL KNYSFLNTSA ISKIIKKYDK IAARKASRQY MEMVDNSYLT SSDEVHKLML RTESTFIEHF
301: SNSNRSQGKN LLRSKANKER HRITFSTGFF FGCSISLIIA LVLIIHARNI MGTPGQITYM ETMFPLYRFF GFVVLHVIMY AANIYFWKIY RVNYSFIFGF
401: KQGTELGYRH VLLLSFGLGT FSLCAALLNL DMEMDSQTKD YKTFSELIPL FLLALVIAIT LCPFNILYRS SRFFFLTALF RCIAAPFYTV NLPDFFLADQ
501: LTSQVQALRS LEFYICYYGF GDFRQRRRNT CRSNGVLTTF YFIVAVIPYW LRLLQCIRRI IEEKDRMHGY NAIKYLLTIV AACLRTAYTL NRGATWNIAA
601: WVFSGVATLY ATYWDIVVDW GLLQIGCKNS FLRDKLLVPH KTVYYAAMVL NVLLRLVWLQ TVLDLKFSFL HRETLVALLA CLEIIRRGIW NFFRLENEHL
701: NNVGKFRAFK TVPLPFNYQE DRDQDN

Best Arabidopsis Sequence Match ( AT4G25350.1 )
(BLAST)

001: MRFGKEFVSQ MIPEWQEAYI DYAYLKTILQ DIQASRNRSD SNNQSSTPSF ARNLTRRYNR DALVSENHDI VVNTVTRLEE GLETAAYETT FLKAGEAGGD
101: FEVTFFRTLD REFNKVNNFY RLKVETARTE ALALNKQMDA LIAFRHKVMD QNQKNPSVFD SVSEDINGSA SEVGSSSKCT EHNVALADLM RNEDTSNESI
201: LERIRMNKTR EITPLSAIKT ILKVHKQDEL KFTRDNLKEV EKRLQVAFIE FYQKLRHLKN YSFLNASAVS KIMKKYDKIA KRNAAKLYME MVDKSFLSSS
301: EEVHKLLLKV ESIFIEHFSN SNRREGMSHL RPKINKERHL ITFSTGFFFG CGISLIVALG LIIHARNIMG TPGQRTYMET MFPLYRFFGF VVLHMDVYAA
401: NIYFWRRYRV NYSFIFGFKQ GTELGYRHVL LLSFGLGTLS LCAVLLNLDM EMDAQTKDYR LVTELIPLFL LVLVIIIVLC PFNILYRSSR FFFLSVLFRC
501: IAAPFYAVHL PDFFLGDQLT SQVQALRSLE FYICYYGFGD FRYRRRNTCT SNIGFRTFYF IVAVIPYWLR FLQCIRRMVE DRDLSHGYNG IKYLLTIVAA
601: SLRTAYTLNR GSNWNITAWV FSGVATFYGT YWDIVLDWGL LQRGCKNSFL RDKLLVPHKT VYYAAMVLNV LLRLVWLQTV LDLKFSFLHR ETMVALMACL
701: EIIRRGIWNF FRLENEHLNN VGRYRAFKTV PLPFNYEEDG DHHNN

Arabidopsis Description

PHO1-H4Phosphate transporter PHO1 homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.