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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY65467 Canola cytosol 95.15 96.5
AT2G03250.1 Thale cress cytosol 69.22 75.38
CDY45173 Canola cytosol, golgi, peroxisome 15.33 67.42
CDY39346 Canola plasma membrane 34.99 67.32
CDY04142 Canola cytosol, nucleus, plasma membrane 67.18 65.18
CDY04143 Canola cytosol 66.92 65.01
CDY33781 Canola cytosol 62.45 64.68
CDY09339 Canola cytosol 67.05 64.26
CDY37178 Canola cytosol 66.92 64.14
CDY16129 Canola cytosol 62.2 63.91
CDY71475 Canola extracellular, golgi, plasma membrane 21.97 63.7
CDY03007 Canola cytosol 64.75 63.53
CDY03008 Canola cytosol, peroxisome, plasma membrane 61.56 63.42
CDY56003 Canola plasma membrane 47.51 63.16
CDY44990 Canola extracellular, golgi 6.13 62.34
CDY45174 Canola cytosol, peroxisome, plasma membrane 63.6 62.25
CDX98143 Canola cytosol 63.09 62.22
CDY45171 Canola cytosol, peroxisome, plasma membrane 49.94 61.57
CDY45175 Canola cytosol, nucleus, plasma membrane 60.92 61.47
CDY03011 Canola cytosol, nucleus, plasma membrane 60.41 60.64
CDY72508 Canola golgi, peroxisome 34.35 60.31
CDY16128 Canola cytosol 59.77 60.0
CDY36429 Canola cytosol, peroxisome, plasma membrane 62.84 59.64
KRG89567 Soybean cytosol, peroxisome, plasma membrane 59.0 58.04
KRG89566 Soybean cytosol 58.37 57.48
CDY33783 Canola cytosol, peroxisome, plasma membrane 40.61 56.89
KRG89568 Soybean cytosol, peroxisome, plasma membrane 56.32 56.11
KRH50561 Soybean endoplasmic reticulum 56.07 54.67
KRG89558 Soybean endoplasmic reticulum 55.56 54.24
CDY46445 Canola cytosol 51.21 53.61
CDX82870 Canola cytosol 50.96 53.41
CDY16184 Canola cytosol 50.45 53.38
CDY56000 Canola cytosol 50.45 53.23
CDY58396 Canola cytosol 49.55 52.57
VIT_01s0182g00150.t01 Wine grape cytosol 54.28 52.28
CDY52351 Canola cytosol, peroxisome, plasma membrane 47.89 52.23
CDX92696 Canola cytosol, peroxisome, plasma membrane 48.4 52.2
CDY08975 Canola cytosol, peroxisome, plasma membrane 48.15 51.64
CDY04251 Canola endoplasmic reticulum, mitochondrion 5.36 49.41
CDY04052 Canola nucleus 40.49 48.84
CDY44412 Canola cytosol, nucleus, plasma membrane 45.47 45.24
CDX95933 Canola cytosol 45.21 45.15
CDY00103 Canola nucleus, peroxisome, plasma membrane 45.47 44.61
CDY40927 Canola cytosol 44.44 44.44
CDY19999 Canola cytosol, nucleus, plasma membrane 45.08 44.24
CDY56002 Canola cytosol 16.73 40.06
CDY36431 Canola cytosol 9.71 34.7
CDY09011 Canola cytosol, peroxisome, plasma membrane 25.29 33.11
CDX81539 Canola cytosol 31.03 31.56
CDX95992 Canola cytosol 31.03 31.56
CDY38614 Canola cytosol 30.78 31.3
CDY54499 Canola cytosol 30.78 31.3
CDY04252 Canola cytosol 30.78 31.26
CDY60937 Canola cytosol, nucleus, plasma membrane 67.18 31.24
CDX85098 Canola cytosol, peroxisome, plasma membrane 22.09 30.67
CDY07366 Canola cytosol 31.16 30.58
CDX77515 Canola cytosol 31.03 29.93
CDY18123 Canola cytosol 25.8 26.47
CDX74638 Canola golgi, plasma membrane, plastid 13.67 23.46
CDY33680 Canola golgi, plasma membrane, plastid 13.79 23.43
CDY09013 Canola nucleus 5.75 22.73
CDX84739 Canola plasma membrane, plastid 13.41 22.63
CDY65458 Canola plasma membrane, plastid 13.28 22.37
CDX84740 Canola plasma membrane 7.92 20.0
CDY52794 Canola nucleus 7.15 19.72
CDX98567 Canola golgi, nucleus, plasma membrane 5.11 19.61
CDY71691 Canola endoplasmic reticulum, extracellular, plasma membrane 2.68 15.44
CDY58360 Canola endoplasmic reticulum, plasma membrane 2.81 15.17
CDX82438 Canola cytosol 3.7 14.36
CDX76897 Canola mitochondrion 2.04 13.33
CDX81844 Canola cytosol 2.81 12.22
CDY22918 Canola cytosol 3.58 12.07
Protein Annotations
MapMan:24.2.7.4MapMan:25.3.2.2GO:A0A078JAD8UniProt:A0A078JAD8EnsemblPlants:CDY64495ProteinID:CDY64495
ProteinID:CDY64495.1ncoils:CoilInterPro:EXS_CGO:GO:0005575GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00042291001InterPro:IPR004331InterPro:IPR004342PFAM:PF03105PFAM:PF03124InterPro:PHO1_SPX
PFscan:PS51380PFscan:PS51382PANTHER:PTHR10783PANTHER:PTHR10783:SF43InterPro:SPX_domTMHMM:TMhelix
UniParc:UPI0004EAD1C7SEG:seg::::
Description
BnaC09g52350DBnaC09g52350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAD8]
Coordinates
chrLK034475:+:11337..18465
Molecular Weight (calculated)
90317.5 Da
IEP (calculated)
9.582
GRAVY (calculated)
-0.131
Length
783 amino acids
Sequence
(BLAST)
001: MKFGKEFSSQ MVPEWQQAYV DYKYLKTLIK DINRFKRKTN PQGHEMTTAL HRTFSGQKRH GFGGGCGQIS RSSTVVDIND GITTAPIHVS SSVTHQYETT
101: FFMTAERGGE YELVFFRRLD DQFNKVEKFY KEKADEVVKE AAALNKQMDA LIAFRFKMKE ERTAEMTLMA SPNAVSPAEL AKTSKAQSPT GVIEEGGSSG
201: AGRSDENDNS VEKESYSKTT LKPANDMSKM KDTTRPASMG VLNSVRISYT KGTPSSTIKS VLKVSNEPEL ILNRYNLRKI EEKLSCAFVE FHRKLWFLKS
301: YSFLNVLALS KILKKYDKVT SRDAAKSYMT MVDNSCLGSS DEVMRLLDHV ETTFIKHFTN GNRTKGMNIL QPKAKRERHR LTFSTGFLGG CMFSLVVALV
401: AIVRTRNILQ DERQELYMNS MFPLYSLFGF IVLHIIMYAA NIYFWRRYRV NYSFIFGFKQ GTELGYKQIL FVGFSIGALA LLCVLANLDM ETNPKTKDYQ
501: ALTELLPLCL LITMLIVLIL PFNIFYRSSR YFFLNCLSRI LAAPLCKVTL PDFFLADQLC SQAQTLRSIH FYICYYGWGD FKQRQNTCRE SRVFNTFLFI
601: AAAFPFVSRF LQCMRRVFEE RNIEQGYNSF KYFLVVVAVC LGMAYEVDRK KDRQTIWRWS GGVTSAMAVV FCTYWDLVQD WGLLNRTSKN PWLRDELLVP
701: HKEVYFIAMI LNVVLRFAWL QTVLDLQFES INTQAVIAFV ASLEIIRRGI WNFFRLENEH LNNVGKFRAF TTVSLPFNYE EDQ
Best Arabidopsis Sequence Match ( AT2G03250.1 )
(BLAST)
001: MKFGKDFSSE WQQAYVDYKY LKTLVKDINR FKRKTNLHGG QISLSSTVLE IEDGITTATI QVSSTASQRY ETTFLMTAEK GGEYELVFFR RLDDEFNKVE
101: KFYREKVDEV VKEAAVLNKQ MDALIAFRLK MKEESTVEMA RFALHGVVSP AELAKNPSMK VHMEAIEEGG SSRAGRRSDE DDYYTDEEDH NDVFFTPANN
201: LSKMKSSSSA FIEVLDSIKI NNTKEALQSN TKSVLKVSNH TELKFSRDNL RKIEEKLICA FVEFHRKLWY LKSYSFLNVL ALSKILTKYD KITSRDAAKS
301: YMKMVDKSCL GSSDEVMKLM ENVEATFIKQ FTNGNRTKGM NILRPKPKRE RHRLTFSTGF LGGCMFSLIV ALVAIVRTRN ILQDDGQKQY MNTMFPLYSL
401: FGFIMLHMTM YAANIYFWRQ YRVNYSFIFG FKQGTELGYK QVLFVGFSIG ALALLCVLAN LDMETDPKTK DYQALTELLP LFLLIAMFVV LVVPFNIFYR
501: SSRFFFLTTL FHMLAAPLYK VTLPDFFLAD QLCSQAQTLR SIEFYICYYG WGDFKQRKNT CKDSQVFNTF LFIVSAFPFF SRFLQCMRRM LEEKNIEQGY
601: NGFKYIVIVV AVCLGMAYEV DDEKDRQIIW RLLGGITSAM AVVFCTYWDL VYDWGLLNRT SKNPWLRDNL LIPHKEVYVL AMVSDNISTI LRWTTWHGCG
701: RCLAKSWYHL VLLRPQHPS
Arabidopsis Description
EXS (ERD1/XPR1/SYG1) family protein [Source:TAIR;Acc:AT2G03250]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.