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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • plastid 4
  • golgi 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid
Any Predictor:golgi, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:golgi
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022884.1-P Field mustard plasma membrane 96.98 99.78
CDY65458 Canola plasma membrane, plastid 99.14 98.92
AT2G32295.2 Thale cress plasma membrane 88.58 88.77
CDX84740 Canola plasma membrane 58.84 88.06
CDY71691 Canola endoplasmic reticulum, extracellular, plasma membrane 25.0 85.29
CDX98567 Canola golgi, nucleus, plasma membrane 37.5 85.29
CDY58360 Canola endoplasmic reticulum, plasma membrane 26.08 83.45
CDX76897 Canola mitochondrion 19.4 75.0
KRH26830 Soybean endoplasmic reticulum, golgi 33.41 67.39
KRH30768 Soybean golgi, plasma membrane 30.39 64.68
VIT_12s0059g02490.t01 Wine grape plastid 63.79 62.71
CDX74638 Canola golgi, plasma membrane, plastid 60.34 61.4
Solyc04g080050.2.1 Tomato golgi, peroxisome, plasma membrane, plastid 62.5 61.31
KRH22527 Soybean plasma membrane 61.64 60.72
Os12t0595000-01 Rice plasma membrane 55.17 60.66
CDY33680 Canola golgi, plasma membrane, plastid 60.13 60.52
TraesCS5B01G070200.1 Wheat plasma membrane 54.96 60.14
TraesCS5D01G074100.1 Wheat plasma membrane 54.96 60.14
TraesCS5A01G062900.1 Wheat plasma membrane 54.96 60.14
EES17313 Sorghum plasma membrane 54.31 59.72
CDX82438 Canola cytosol 25.86 59.41
TraesCS7D01G365900.3 Wheat plasma membrane 55.17 59.12
Solyc07g022830.2.1 Tomato golgi, plasma membrane, plastid 58.41 58.79
TraesCS7A01G356800.1 Wheat plasma membrane 54.74 58.66
TraesCS7B01G271100.2 Wheat plasma membrane 54.53 58.43
GSMUA_Achr7P00360_001 Banana plasma membrane 59.27 57.89
PGSC0003DMT400071614 Potato golgi, plasma membrane, plastid 33.41 56.57
OQU79488 Sorghum golgi, plasma membrane 26.51 56.42
GSMUA_Achr4P23610_001 Banana plasma membrane 57.97 56.39
CDX81844 Canola cytosol 21.77 56.11
Zm00001d030939_P004 Maize plasma membrane 54.53 55.73
KRH26831 Soybean plasma membrane 26.94 55.56
Zm00001d041383_P002 Maize plasma membrane 54.31 55.51
PGSC0003DMT400080869 Potato golgi, peroxisome, plasma membrane 53.45 54.87
CDY22918 Canola cytosol 25.86 51.72
HORVU5Hr1G016790.15 Barley peroxisome, plastid 55.17 51.0
CDY71475 Canola extracellular, golgi, plasma membrane 15.52 26.67
CDY44990 Canola extracellular, golgi 4.31 25.97
CDY39346 Canola plasma membrane 19.61 22.36
CDY45173 Canola cytosol, golgi, peroxisome 8.19 21.35
CDY72508 Canola golgi, peroxisome 19.61 20.4
CDX85098 Canola cytosol, peroxisome, plasma membrane 22.41 18.44
CDY04251 Canola endoplasmic reticulum, mitochondrion 3.23 17.65
CDY56003 Canola plasma membrane 20.69 16.3
CDY09011 Canola cytosol, peroxisome, plasma membrane 20.69 16.05
CDY04052 Canola nucleus 22.41 16.02
CDX92696 Canola cytosol, peroxisome, plasma membrane 22.63 14.46
CDX82870 Canola cytosol 23.28 14.46
CDY46445 Canola cytosol 23.06 14.3
CDY16184 Canola cytosol 22.63 14.19
CDY58396 Canola cytosol 22.41 14.09
CDY18123 Canola cytosol 23.06 14.02
CDY08975 Canola cytosol, peroxisome, plasma membrane 21.98 13.97
CDY52351 Canola cytosol, peroxisome, plasma membrane 21.55 13.93
CDY44412 Canola cytosol, nucleus, plasma membrane 23.49 13.85
CDY54499 Canola cytosol 22.84 13.77
CDY38614 Canola cytosol 22.84 13.77
CDX95992 Canola cytosol 22.84 13.77
CDY65467 Canola cytosol 22.84 13.73
CDX81539 Canola cytosol 22.63 13.64
CDY33781 Canola cytosol 22.2 13.62
CDY16129 Canola cytosol 22.2 13.52
CDY04252 Canola cytosol 22.41 13.49
CDY64495 Canola cytosol 22.63 13.41
CDY07366 Canola cytosol 23.06 13.41
CDX77515 Canola cytosol 23.28 13.3
CDY19999 Canola cytosol, nucleus, plasma membrane 22.84 13.28
CDY56000 Canola cytosol 20.91 13.07
CDY00103 Canola nucleus, peroxisome, plasma membrane 22.2 12.91
CDY03008 Canola cytosol, peroxisome, plasma membrane 20.91 12.76
CDX95933 Canola cytosol 21.34 12.63
CDY40927 Canola cytosol 21.12 12.52
CDX98143 Canola cytosol 21.34 12.47
CDY04142 Canola cytosol, nucleus, plasma membrane 21.55 12.39
CDY03007 Canola cytosol 21.12 12.28
CDY45174 Canola cytosol, peroxisome, plasma membrane 21.12 12.25
CDY04143 Canola cytosol 21.12 12.16
CDY16128 Canola cytosol 20.26 12.05
CDY36429 Canola cytosol, peroxisome, plasma membrane 21.34 12.0
CDY37178 Canola cytosol 20.91 11.87
CDY09339 Canola cytosol 20.69 11.75
CDY45175 Canola cytosol, nucleus, plasma membrane 19.4 11.6
CDY03011 Canola cytosol, nucleus, plasma membrane 19.4 11.54
CDY45171 Canola cytosol, peroxisome, plasma membrane 13.36 9.76
CDY33783 Canola cytosol, peroxisome, plasma membrane 7.54 6.26
CDY60937 Canola cytosol, nucleus, plasma membrane 21.34 5.88
CDY36431 Canola cytosol 1.94 4.11
CDY09013 Canola nucleus 1.72 4.04
CDY56002 Canola cytosol 2.59 3.67
CDY52794 Canola nucleus 1.08 1.76
Protein Annotations
EnsemblPlants:CDX84739EnsemblPlantsGene:GSBRNA2T00142025001GO:A0A078D8U1GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:EXS_CInterPro:IPR004342PANTHER:PTHR10783PANTHER:PTHR10783:SF46PFAM:PF03124PFscan:PS51380
ProteinID:CDX84739ProteinID:CDX84739.1SEG:segTMHMM:TMhelixUniParc:UPI0004EDDF46MapMan:35.1
Description
BnaA03g14910D
Coordinates
chrLK031838:+:1011564..1014238
Molecular Weight (calculated)
53996.9 Da
IEP (calculated)
9.555
GRAVY (calculated)
0.282
Length
464 amino acids
Sequence
(BLAST)
001: MFGGVFSVPV NNPHLRKSGS RLIISNLGEN DLKNSSMQLG TIAKLRSPLL LSSLKVALYV GGLYVCGKIG WESVMKMGQD TRELFFYETF LYYNPLLLIT
101: MMVWLWGVNL WVFSRTGVDY AAIFYLGPDH LSHKEIWKCA RWMTTIILTS MTAYLYLYSH GDVSLAASQP IVLYLSAVII LIIPFDIFYM SSRYYLLWTF
201: WRILFPVQTV SFSDFFLADI LTSLSKVLSD LERSVCRMVH RQVATVAWFE ADSVCGSHSA VIPLVLVLPY LFRLFQCIRQ YKDSKDIANI WNAGKYLTAV
301: PVIFLSALKY FIDQDTWTYS IQPAWILSGL ANTFFSFFWD VLRDWDLSVF TRIFKFTKPN LCSHLLYGRR WVYVWVIGSN LVLRWTWTYK LSAHLRNNYI
401: TVFIITLLEI YRRFQWAFFR IENVWYKINN PKRTTSHQTN PVSLQNDNGG EQEKLLAHSH SLGV
Best Arabidopsis Sequence Match ( AT2G32295.1 )
(BLAST)
001: MFGGVLSMPV NNPHLRKSGS RHIVTNLGDN DLKTASMLLS TYAKLQTPIF LRSLKVALYI GGLYVCGKVG LESVMKMGVE TRELFFYETF LYYNPLLLIT
101: LMVWLWGVNL WVFSRSGVDY AAIFYLGSDH LSHREIWKCA RWMTIIILTS MTAYLYLYSH GDVKLAASQP VVLYFSAVII LIIPFNIFYM SSRYYLLWTF
201: WRILFPVHAV TFSDFFLADI LTSMSKVLSD LERSVCRMVH RQVATVAWFE ADSVCGSHSA AIPLVLVLPY LFRLFQCIRQ YKDSKDIANI YNAGKYLTAV
301: PVIFLSALKY YIDPDTWTYS IQPAWILSGL ANTFFSFFWD ILRDWDLSVF TRIFKFTRPN LFSHLLYGRR WVYVWVIGSN LVLRWTWTYK LSAHLRNNYI
401: TVFIITALEI YRRFQWAFFR IENVWYKINN PKHTAHQSNP LSLQHDIDSE HEKLLAHSHS PGV
Arabidopsis Description
EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:F4ISV2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.