CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71475	Canola	extracellular, golgi, plasma membrane	51.35	77.41
CDY72508	Canola	golgi, peroxisome	77.15	70.4
CDY56003	Canola	plasma membrane	96.56	66.72
CDY45173	Canola	cytosol, golgi, peroxisome	26.54	60.67
Bra019686.1-P	Field mustard	cytosol	96.81	48.58
CDY44990	Canola	extracellular, golgi	9.09	48.05
CDY33781	Canola	cytosol	80.59	43.39
CDY56000	Canola	cytosol	78.87	43.26
CDY16129	Canola	cytosol	80.59	43.04
AT1G14040.1	Thale cress	cytosol	83.29	41.7
CDX98143	Canola	cytosol	81.08	41.56
CDY16128	Canola	cytosol	77.4	40.38
CDY36429	Canola	cytosol, peroxisome, plasma membrane	81.33	40.12
CDY04143	Canola	cytosol	78.87	39.83
CDY04142	Canola	cytosol, nucleus, plasma membrane	78.38	39.53
CDY09339	Canola	cytosol	78.38	39.05
CDY37178	Canola	cytosol	78.13	38.92
CDY03008	Canola	cytosol, peroxisome, plasma membrane	70.02	37.5
CDY45175	Canola	cytosol, nucleus, plasma membrane	69.78	36.6
CDY03011	Canola	cytosol, nucleus, plasma membrane	69.53	36.28
CDY03007	Canola	cytosol	70.52	35.96
CDY45174	Canola	cytosol, peroxisome, plasma membrane	70.27	35.75
CDY65467	Canola	cytosol	66.83	35.23
CDY64495	Canola	cytosol	67.32	34.99
KRG89567	Soybean	cytosol, peroxisome, plasma membrane	68.3	34.92
CDY46445	Canola	cytosol	63.15	34.36
KRG89566	Soybean	cytosol	67.08	34.34
CDX82870	Canola	cytosol	62.9	34.27
CDY16184	Canola	cytosol	62.16	34.19
CDX92696	Canola	cytosol, peroxisome, plasma membrane	60.2	33.75
CDY58396	Canola	cytosol	61.18	33.74
CDY08975	Canola	cytosol, peroxisome, plasma membrane	59.71	33.29
CDY52351	Canola	cytosol, peroxisome, plasma membrane	58.72	33.29
KRG89568	Soybean	cytosol, peroxisome, plasma membrane	64.13	33.21
KRG89558	Soybean	endoplasmic reticulum	64.62	32.79
CDY04052	Canola	nucleus	52.09	32.67
KRH50561	Soybean	endoplasmic reticulum	64.37	32.63
VIT_01s0182g00150.t01	Wine grape	cytosol	64.86	32.47
CDY04251	Canola	endoplasmic reticulum, mitochondrion	6.39	30.59
CDY45171	Canola	cytosol, peroxisome, plasma membrane	45.45	29.13
CDY00103	Canola	nucleus, peroxisome, plasma membrane	53.32	27.19
CDY19999	Canola	cytosol, nucleus, plasma membrane	53.32	27.19
CDY44412	Canola	cytosol, nucleus, plasma membrane	52.58	27.19
CDX95933	Canola	cytosol	52.09	27.04
CDY40927	Canola	cytosol	50.86	26.44
CDY09011	Canola	cytosol, peroxisome, plasma membrane	34.64	23.58
CDY33783	Canola	cytosol, peroxisome, plasma membrane	32.19	23.43
CDX85098	Canola	cytosol, peroxisome, plasma membrane	32.19	23.23
CDX74638	Canola	golgi, plasma membrane, plastid	23.59	21.05
CDY33680	Canola	golgi, plasma membrane, plastid	23.59	20.82
CDY65458	Canola	plasma membrane, plastid	22.6	19.78
CDX84740	Canola	plasma membrane	14.99	19.68
CDX84739	Canola	plasma membrane, plastid	22.36	19.61
CDY60937	Canola	cytosol, nucleus, plasma membrane	79.36	19.18
CDY18123	Canola	cytosol	33.17	17.69
CDY54499	Canola	cytosol	33.42	17.66
CDX95992	Canola	cytosol	32.92	17.4
CDX81539	Canola	cytosol	32.92	17.4
CDY38614	Canola	cytosol	32.92	17.4
CDY04252	Canola	cytosol	32.43	17.12
CDX77515	Canola	cytosol	34.15	17.12
CDY07366	Canola	cytosol	33.42	17.04
CDX98567	Canola	golgi, nucleus, plasma membrane	7.62	15.2
CDY71691	Canola	endoplasmic reticulum, extracellular, plasma membrane	4.91	14.71
CDY58360	Canola	endoplasmic reticulum, plasma membrane	5.16	14.48
CDX76897	Canola	mitochondrion	3.93	13.33
CDX82438	Canola	cytosol	5.16	10.4
CDY22918	Canola	cytosol	5.9	10.34
CDX81844	Canola	cytosol	3.44	7.78
CDY56002	Canola	cytosol	2.46	3.06
CDY36431	Canola	cytosol	0.98	1.83
CDY52794	Canola	nucleus	0.0	0.0
CDY09013	Canola	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDY39346	EnsemblPlantsGene:GSBRNA2T00067777001	GO:A0A078HP25	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:EXS_C	InterPro:IPR004342	PANTHER:PTHR10783	PANTHER:PTHR10783:SF43	PFAM:PF03124	PFscan:PS51257
PFscan:PS51380	ProteinID:CDY39346	ProteinID:CDY39346.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EECD29
UniProt:A0A078HP25	MapMan:24.2.7.4	MapMan:25.3.2.2	:	:	:

Description

BnaC05g10330DBnaC05g10330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HP25]

Coordinates

chrLK032445:-:318420..321243

Molecular Weight (calculated)

47373.5 Da

IEP (calculated)

9.756

GRAVY (calculated)

0.286

Length

407 amino acids

Sequence
(BLAST)

001: MNILRPKAKR ERHRLTFSTG FSAGCIFSLI VALAAIIRTR NLLQEEGQAQ YMDTMFPLYS LFGFIVLHII MFAGNIYYWR RYKVNYSFIF GFKEGTELGY
101: RQVLLVAFST GVLALLCVLA NLDMEVDPVT KDYQAFTELL PLILLLGIFA VLVMPFNFFY RSNRIFFLTC LLHCMAAPLY KVTLPDFFLG DQLTSQVQAL
201: RSIEFYICYY GWGDFRHRNN TCNKSGAYKG FFFIVAVIPY VSRLLQCLRR LFEEENPEQG WNGLKYFLTI VAICLRTAYS IQQGQIAWRV LAAISSAAAA
301: IFCTYWDFIH DWGLLKRTSK NRWLRDKLLI PQKKVYFIAM ILNVLLRFAW IQTVMDFNFS FMHKQTMVAV VASLEIIRRG IWNFFRLEKE HLKNVKQESS
401: HGGDKGT

Best Arabidopsis Sequence Match ( AT1G14040.1 )
(BLAST)

001: MKFGKEFSSQ MVPEWQQAYM DYDFLKTLLK EIITFKRRTN NAPSHGGAKT GGGLNRKLTL YRAFSGLVST PRHKRSNSSH DVEEGVQLTG SMRSGPILVN
101: TTASHGYETT FLMAAEEGGE YELVFFRRLD DEFNKVDKFY RKKVEEVLKE AAMLNKQMDA LIAFRVKVEN PDGWRWEERT VEMTRLASDI ATSAAALSAS
201: TPAGAKSMKV RSQEHMEAIQ EGGSSRAGLM EDDEEDEDEQ NETSVVSTGA IDNETTTSRM RGARPSPIDV LGRVKINNTK ETPRSTIKGV LKVSKQTDLK
301: FSRENLMKVE ESLKRAFIEF YQKLRLLKSY SFLNVLAFSK ILKKYDKITS RDATKPYMKV VDSSYLGSSD EVMRLMERVE ATFIKHFANA NRAKAMNILR
401: PKAKRERHRI TFSTGFSAGC VFSLIVALVA IIRTRNLLEM EGQKEYMNTM FPLYSLFGFI VLHIIVYAAN IYYWRRYRVN YSFIFGFKQG TELGYRQVLL
501: VGFSIGVLAL LCVLANLDME ADPKTKAYQA RTEILPLILL AAMFIVLVLP FNYFYRSSRF FFLTCLFHCL AAPLYKVTLP DFFLGDQLTS QVQAIRSIEF
601: YICYYGWGDF RHRKSTCKES DVYNTFFFIV AVIPYVSRLL QCLRRLFEEK NPEQGYNGLK YFLTIVAVCL RTAYSIQKGQ VAWRVLAAVF SFIAAIFCTY
701: WDFVHDWGLL NRTSKNRWLR DKLLVPQKKV YFIAMVLNVL LRFAWIQTVL DFNFSFMHRQ TMVAIVASLE IIRRGIWNFF RLENEHLNNV GKYRAFKSVP
801: LPFNYDEDDD KDN

Arabidopsis Description

PHO1;H3Phosphate transporter PHO1 homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.