CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71691	Canola	endoplasmic reticulum, extracellular, plasma membrane	71.67	63.24
CDY58360	Canola	endoplasmic reticulum, plasma membrane	74.17	61.38
CDX81844	Canola	cytosol	65.83	43.89
CDX82438	Canola	cytosol	65.0	38.61
CDX98567	Canola	golgi, nucleus, plasma membrane	63.33	37.25
CDY22918	Canola	cytosol	65.83	34.05
KRH26831	Soybean	plasma membrane	49.17	26.22
PGSC0003DMT400071614	Potato	golgi, plasma membrane, plastid	49.17	21.53
CDX84739	Canola	plasma membrane, plastid	75.0	19.4
CDY65458	Canola	plasma membrane, plastid	75.0	19.35
AT2G32295.2	Thale cress	plasma membrane	67.5	17.49
Os12t0595000-01	Rice	plasma membrane	45.83	13.03
EES17313	Sorghum	plasma membrane	45.0	12.8
TraesCS5A01G062900.1	Wheat	plasma membrane	45.0	12.74
TraesCS5B01G070200.1	Wheat	plasma membrane	45.0	12.74
TraesCS5D01G074100.1	Wheat	plasma membrane	45.0	12.74
VIT_12s0059g02490.t01	Wine grape	plastid	48.33	12.29
CDX74638	Canola	golgi, plasma membrane, plastid	46.67	12.28
Solyc04g080050.2.1	Tomato	golgi, peroxisome, plasma membrane, plastid	48.33	12.26
TraesCS7A01G356800.1	Wheat	plasma membrane	44.17	12.24
TraesCS7B01G271100.2	Wheat	plasma membrane	44.17	12.24
TraesCS7D01G365900.3	Wheat	plasma membrane	44.17	12.24
CDY33680	Canola	golgi, plasma membrane, plastid	46.67	12.15
Zm00001d030939_P004	Maize	plasma membrane	45.83	12.11
KRH22527	Soybean	plasma membrane	47.5	12.1
Solyc07g022830.2.1	Tomato	golgi, plasma membrane, plastid	45.83	11.93
Zm00001d041383_P002	Maize	plasma membrane	45.0	11.89
GSMUA_Achr7P00360_001	Banana	plasma membrane	46.67	11.79
HORVU5Hr1G016790.15	Barley	peroxisome, plastid	48.33	11.55
GSMUA_Achr4P23610_001	Banana	plasma membrane	45.83	11.53
PGSC0003DMT400080869	Potato	golgi, peroxisome, plasma membrane	24.17	6.42
CDY39346	Canola	plasma membrane	13.33	3.93
CDY72508	Canola	golgi, peroxisome	12.5	3.36
CDY09011	Canola	cytosol, peroxisome, plasma membrane	15.0	3.01
CDY56003	Canola	plasma membrane	14.17	2.89
CDY33783	Canola	cytosol, peroxisome, plasma membrane	13.33	2.86
CDX85098	Canola	cytosol, peroxisome, plasma membrane	13.33	2.84
CDX84740	Canola	plasma membrane	6.67	2.58
CDY45171	Canola	cytosol, peroxisome, plasma membrane	13.33	2.52
CDY18123	Canola	cytosol	15.83	2.49
CDY04052	Canola	nucleus	12.5	2.31
CDX82870	Canola	cytosol	14.17	2.28
CDY46445	Canola	cytosol	14.17	2.27
CDX77515	Canola	cytosol	15.0	2.22
CDY38614	Canola	cytosol	14.17	2.21
CDX95992	Canola	cytosol	14.17	2.21
CDX81539	Canola	cytosol	14.17	2.21
CDY54499	Canola	cytosol	14.17	2.21
CDY65467	Canola	cytosol	14.17	2.2
CDY44412	Canola	cytosol, nucleus, plasma membrane	14.17	2.16
CDY07366	Canola	cytosol	14.17	2.13
CDY04142	Canola	cytosol, nucleus, plasma membrane	14.17	2.11
CDY04252	Canola	cytosol	13.33	2.08
CDX92696	Canola	cytosol, peroxisome, plasma membrane	12.5	2.07
CDY16128	Canola	cytosol	13.33	2.05
CDY64495	Canola	cytosol	13.33	2.04
CDX95933	Canola	cytosol	13.33	2.04
CDY58396	Canola	cytosol	12.5	2.03
CDY16184	Canola	cytosol	12.5	2.03
CDY19999	Canola	cytosol, nucleus, plasma membrane	13.33	2.01
CDY00103	Canola	nucleus, peroxisome, plasma membrane	13.33	2.01
CDY03007	Canola	cytosol	13.33	2.01
CDY33781	Canola	cytosol	12.5	1.98
CDY03008	Canola	cytosol, peroxisome, plasma membrane	12.5	1.97
CDY16129	Canola	cytosol	12.5	1.97
CDX98143	Canola	cytosol	12.5	1.89
CDY56000	Canola	cytosol	11.67	1.89
CDY45174	Canola	cytosol, peroxisome, plasma membrane	12.5	1.88
CDY04143	Canola	cytosol	12.5	1.86
CDY36429	Canola	cytosol, peroxisome, plasma membrane	12.5	1.82
CDY52351	Canola	cytosol, peroxisome, plasma membrane	10.83	1.81
CDY08975	Canola	cytosol, peroxisome, plasma membrane	10.83	1.78
CDY37178	Canola	cytosol	11.67	1.71
CDY09339	Canola	cytosol	11.67	1.71
CDY45175	Canola	cytosol, nucleus, plasma membrane	10.83	1.68
CDY03011	Canola	cytosol, nucleus, plasma membrane	10.83	1.67
CDY40927	Canola	cytosol	10.83	1.66
CDY56002	Canola	cytosol	4.17	1.53
CDY04251	Canola	endoplasmic reticulum, mitochondrion	0.83	1.18
CDY60937	Canola	cytosol, nucleus, plasma membrane	13.33	0.95
CDY36431	Canola	cytosol	1.67	0.91
KRH30768	Soybean	golgi, plasma membrane	0.83	0.46
OQU79488	Sorghum	golgi, plasma membrane	0.0	0.0
KRH26830	Soybean	endoplasmic reticulum, golgi	0.0	0.0
CDY44990	Canola	extracellular, golgi	0.0	0.0
CDY45173	Canola	cytosol, golgi, peroxisome	0.0	0.0
CDY71475	Canola	extracellular, golgi, plasma membrane	0.0	0.0
CDY52794	Canola	nucleus	0.0	0.0
CDY09013	Canola	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDX76897	EnsemblPlantsGene:GSBRNA2T00127416001	GO:A0A078CJI1	PANTHER:PTHR10783	PANTHER:PTHR10783:SF46	ProteinID:CDX76897
ProteinID:CDX76897.1	TMHMM:TMhelix	UniParc:UPI0004EDEDB4	MapMan:35.2	:	:

Description

BnaC08g34830D

Coordinates

chrLK031808:+:1817286..1819085

Molecular Weight (calculated)

13891.2 Da

IEP (calculated)

9.539

GRAVY (calculated)

0.221

Length

120 amino acids

Sequence
(BLAST)

001: MFHRRHKASI SCLFLSRKIR VAMYVGGLYV CGKIGWESVI KKGLDTQELF FHKNFLYYNP LVLITGVDYA SIFYLGPDHL SHKEIWKCAR WMMTIILTSM
101: TAYMYLYSHG DVSLAASQPV

Best Arabidopsis Sequence Match ( AT2G32295.1 )
(BLAST)

001: MFGGVLSMPV NNPHLRKSGS RHIVTNLGDN DLKTASMLLS TYAKLQTPIF LRSLKVALYI GGLYVCGKVG LESVMKMGVE TRELFFYETF LYYNPLLLIT
101: LMVWLWGVNL WVFSRSGVDY AAIFYLGSDH LSHREIWKCA RWMTIIILTS MTAYLYLYSH GDVKLAASQP VVLYFSAVII LIIPFNIFYM SSRYYLLWTF
201: WRILFPVHAV TFSDFFLADI LTSMSKVLSD LERSVCRMVH RQVATVAWFE ADSVCGSHSA AIPLVLVLPY LFRLFQCIRQ YKDSKDIANI YNAGKYLTAV
301: PVIFLSALKY YIDPDTWTYS IQPAWILSGL ANTFFSFFWD ILRDWDLSVF TRIFKFTRPN LFSHLLYGRR WVYVWVIGSN LVLRWTWTYK LSAHLRNNYI
401: TVFIITALEI YRRFQWAFFR IENVWYKINN PKHTAHQSNP LSLQHDIDSE HEKLLAHSHS PGV

Arabidopsis Description

EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:F4ISV2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.