CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 1
golgi 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	endoplasmic reticulum, golgi, mitochondrion
BaCelLo:	plastid
MultiLoc:	golgi
PProwler:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79488	Sorghum	golgi, plasma membrane	66.09	69.72
KRH30768	Soybean	golgi, plasma membrane	63.04	66.51
CDX84740	Canola	plasma membrane	67.39	50.0
KRH22527	Soybean	plasma membrane	96.96	47.35
KRH00677	Soybean	plasma membrane	77.39	42.38
KRH40514	Soybean	plasma membrane	76.52	41.9
VIT_12s0059g02490.t01	Wine grape	plastid	83.48	40.68
TraesCS5A01G062900.1	Wheat	plasma membrane	74.78	40.57
Os12t0595000-01	Rice	plasma membrane	74.35	40.52
TraesCS5D01G074100.1	Wheat	plasma membrane	74.35	40.33
TraesCS5B01G070200.1	Wheat	plasma membrane	74.35	40.33
EES17313	Sorghum	plasma membrane	73.48	40.05
Solyc04g080050.2.1	Tomato	golgi, peroxisome, plasma membrane, plastid	81.74	39.75
PGSC0003DMT400080869	Potato	golgi, peroxisome, plasma membrane	77.83	39.6
TraesCS7A01G356800.1	Wheat	plasma membrane	73.04	38.8
TraesCS7D01G365900.3	Wheat	plasma membrane	73.04	38.8
TraesCS7B01G271100.2	Wheat	plasma membrane	72.61	38.57
Solyc07g022830.2.1	Tomato	golgi, plasma membrane, plastid	76.09	37.96
Zm00001d041383_P002	Maize	plasma membrane	73.91	37.44
GSMUA_Achr7P00360_001	Banana	plasma membrane	76.52	37.05
Zm00001d030939_P004	Maize	plasma membrane	73.04	37.0
GSMUA_Achr4P23610_001	Banana	plasma membrane	75.22	36.27
Bra022884.1-P	Field mustard	plasma membrane	67.39	34.37
AT2G32295.2	Thale cress	plasma membrane	68.7	34.13
HORVU5Hr1G016790.15	Barley	peroxisome, plastid	74.35	34.06
CDX84739	Canola	plasma membrane, plastid	67.39	33.41
CDY65458	Canola	plasma membrane, plastid	67.39	33.33
KRH72033	Soybean	cytosol, extracellular, golgi	14.78	27.2
KRH07887	Soybean	extracellular, golgi, mitochondrion, plasma membrane	12.17	23.93
KRG92358	Soybean	cytosol	26.52	7.88
KRH34432	Soybean	cytosol	26.52	7.88
KRH71113	Soybean	cytosol	26.52	7.73
KRG89558	Soybean	endoplasmic reticulum	26.52	7.61
KRH75548	Soybean	cytosol	26.09	7.59
KRH40050	Soybean	cytosol	24.78	7.51
KRH69098	Soybean	cytosol	24.78	7.47
KRH50561	Soybean	endoplasmic reticulum	25.65	7.35
KRH01215	Soybean	cytosol	24.78	7.35
KRH31683	Soybean	cytosol, nucleus, plasma membrane	24.35	7.33
KRH70782	Soybean	cytosol	23.91	7.32
PGSC0003DMT400071614	Potato	golgi, plasma membrane, plastid	8.7	7.3
KRG89566	Soybean	cytosol	25.22	7.3
KRG89567	Soybean	cytosol, peroxisome, plasma membrane	25.22	7.29
KRG89568	Soybean	cytosol, peroxisome, plasma membrane	24.35	7.12
CDX98567	Canola	golgi, nucleus, plasma membrane	6.09	6.86
CDY22918	Canola	cytosol	2.17	2.16
KRH26831	Soybean	plasma membrane	0.0	0.0
CDY71691	Canola	endoplasmic reticulum, extracellular, plasma membrane	0.0	0.0
CDY58360	Canola	endoplasmic reticulum, plasma membrane	0.0	0.0
CDX82438	Canola	cytosol	0.0	0.0
CDX81844	Canola	cytosol	0.0	0.0
CDX76897	Canola	mitochondrion	0.0	0.0
Bra012265.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02007749	EnsemblPlants:KRH26830	EnsemblPlantsGene:GLYMA_12G1960002	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:EXS_C	InterPro:IPR004342	PANTHER:PTHR10783	PANTHER:PTHR10783:SF46	PFAM:PF03124	PFscan:PS51380
ProteinID:KRH26829.1	ProteinID:KRH26830	ProteinID:KRH26830.1	UniParc:UPI0006ED7DDB	UniProt:A0A0R0H7I9	MapMan:35.2

Description

hypothetical protein

Coordinates

chr12:-:35723015..35725983

Molecular Weight (calculated)

27436.1 Da

IEP (calculated)

9.620

GRAVY (calculated)

-0.037

Length

230 amino acids

Sequence
(BLAST)

001: VFSDLERSVC RMVHRQVATI AWLEADSVCG SHSVAIPLVL VLPYLFRLNQ CLRQYKDTGE KTTLLNALKY STAVPVIFLS ALKYHVFPER WTNFYRPLWL
101: LSGVVNSSYS FYWDVNRDWD LSGFTRIFKF NKPHLFSHML HGRRWVYFWV IGSNLVLRCT WTYKLSAHLR HNYLTVFFIA ALEIFRRFQW IFFRVENEWN
201: KMNSKSHSHL SVNEIPDDEE KLLHSINYSV

Best Arabidopsis Sequence Match ( AT2G32295.1 )
(BLAST)

001: MFGGVLSMPV NNPHLRKSGS RHIVTNLGDN DLKTASMLLS TYAKLQTPIF LRSLKVALYI GGLYVCGKVG LESVMKMGVE TRELFFYETF LYYNPLLLIT
101: LMVWLWGVNL WVFSRSGVDY AAIFYLGSDH LSHREIWKCA RWMTIIILTS MTAYLYLYSH GDVKLAASQP VVLYFSAVII LIIPFNIFYM SSRYYLLWTF
201: WRILFPVHAV TFSDFFLADI LTSMSKVLSD LERSVCRMVH RQVATVAWFE ADSVCGSHSA AIPLVLVLPY LFRLFQCIRQ YKDSKDIANI YNAGKYLTAV
301: PVIFLSALKY YIDPDTWTYS IQPAWILSGL ANTFFSFFWD ILRDWDLSVF TRIFKFTRPN LFSHLLYGRR WVYVWVIGSN LVLRWTWTYK LSAHLRNNYI
401: TVFIITALEI YRRFQWAFFR IENVWYKINN PKHTAHQSNP LSLQHDIDSE HEKLLAHSHS PGV

Arabidopsis Description

EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:F4ISV2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.