CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 2
plastid 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10881
KRH20454
KRH21442
KRH50043

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23430.1	KRH10881	AT2G33770.1	22634761
AT3G23430.1	KRH20454	AT2G33770.1	22634761
AT3G23430.1	KRH21442	AT2G33770.1	22634761
AT3G23430.1	KRH50043	AT2G33770.1	22634761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34432	Soybean	cytosol	95.48	95.48
KRH72033	Soybean	cytosol, extracellular, golgi	13.95	86.4
KRH31683	Soybean	cytosol, nucleus, plasma membrane	77.26	78.27
KRH69098	Soybean	cytosol	76.49	77.59
KRH07887	Soybean	extracellular, golgi, mitochondrion, plasma membrane	11.11	73.5
CDY09011	Canola	cytosol, peroxisome, plasma membrane	54.52	70.57
VIT_05s0049g01410.t01	Wine grape	cytosol	70.93	68.88
PGSC0003DMT400044207	Potato	cytosol, nucleus, plasma membrane	69.77	68.35
Solyc09g090360.2.1	Tomato	cytosol	69.12	67.89
Bra023727.1-P	Field mustard	cytosol	68.22	67.35
Bra014948.1-P	Field mustard	cytosol	67.57	66.71
CDX85098	Canola	cytosol, peroxisome, plasma membrane	48.06	65.96
AT3G23430.1	Thale cress	cytosol, nucleus, plasma membrane	66.54	65.86
CDX77515	Canola	cytosol	67.57	64.41
TraesCS6D01G364200.1	Wheat	mitochondrion	37.21	59.02
GSMUA_Achr1P20470_001	Banana	nucleus	58.53	57.41
Zm00001d051945_P001	Maize	peroxisome, plasma membrane, plastid	40.18	56.24
CDY18123	Canola	cytosol	54.13	54.91
CDY09013	Canola	nucleus	13.82	54.04
GSMUA_Achr6P36590_001	Banana	cytosol	56.2	53.51
Os02t0809800-01	Rice	cytosol	54.65	51.9
TraesCS6B01G418600.1	Wheat	cytosol, nucleus, plasma membrane	52.97	51.38
TraesCS6A01G380000.1	Wheat	cytosol	52.97	51.31
TraesCS6A01G379700.1	Wheat	cytosol	52.97	51.31
TraesCS6D01G364600.1	Wheat	plastid	52.97	51.25
TraesCS6D01G364100.1	Wheat	cytosol	52.2	51.14
Zm00001d018445_P004	Maize	cytosol, nucleus, plasma membrane	52.71	50.68
HORVU6Hr1G089130.9	Barley	cytosol	52.84	50.56
TraesCS6D01G364300.1	Wheat	cytosol	50.9	50.51
HORVU6Hr1G089190.23	Barley	cytosol	52.71	50.43
TraesCS6B01G418000.1	Wheat	cytosol	50.78	50.32
EES07731	Sorghum	cytosol, nucleus, plasma membrane	52.33	49.88
TraesCS6B01G418100.2	Wheat	cytosol, peroxisome, plasma membrane	50.9	48.34
KRH75548	Soybean	cytosol	47.42	46.4
KRH71113	Soybean	cytosol	47.03	46.13
KRH40050	Soybean	cytosol	32.82	33.47
KRG89566	Soybean	cytosol	33.98	33.08
KRG89567	Soybean	cytosol, peroxisome, plasma membrane	33.59	32.66
KRH01215	Soybean	cytosol	32.69	32.6
KRG89568	Soybean	cytosol, peroxisome, plasma membrane	32.69	32.19
KRH50561	Soybean	endoplasmic reticulum	32.56	31.38
KRH70782	Soybean	cytosol	30.23	31.16
KRG89558	Soybean	endoplasmic reticulum	32.04	30.92
KRH30768	Soybean	golgi, plasma membrane	7.62	27.06
KRH22527	Soybean	plasma membrane	16.15	26.54
KRH26830	Soybean	endoplasmic reticulum, golgi	7.88	26.52
KRH00677	Soybean	plasma membrane	14.34	26.43
KRH40514	Soybean	plasma membrane	14.08	25.95
KRH26831	Soybean	plasma membrane	7.11	24.44

Protein Annotations

EntrezGene:100802251	MapMan:24.2.7.4	MapMan:25.3.2.2	EMBL:ACUP02012746	ncoils:Coil	InterPro:EXS_C
EnsemblPlantsGene:GLYMA_20G206900	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005802	GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	InterPro:IPR004331	InterPro:IPR004342
UniProt:K7N4R2	EnsemblPlants:KRG92358	ProteinID:KRG92358	ProteinID:KRG92358.1	PFAM:PF03105	PFAM:PF03124
InterPro:PHO1_SPX	PFscan:PS51380	PFscan:PS51382	PANTHER:PTHR10783	PANTHER:PTHR10783:SF82	InterPro:SPX_dom
TMHMM:TMhelix	UniParc:UPI0002956BAF	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:44372052..44382117

Molecular Weight (calculated)

89893.0 Da

IEP (calculated)

9.333

GRAVY (calculated)

-0.122

Length

774 amino acids

Sequence
(BLAST)

001: MVKFSKELEA QLIPEWKEAF VNYWQLKKQI KRIKLSRLPK QSHHHAKPDF GLSIFDSLSF FVKNIAQNFS TSDHHDLNII QVRKKTTKGD EEEIYETELA
101: QLFSEEDEIR VFFMRLDEEL NKVNQFYRRQ ESEFIERGET LNKQLQILLD LKRIISDRRR KNSPSKPYST GISPQYSPTR DSDYSVCAGN FGDSDETNSE
201: ISHTDEVITT LERNGISFVN SATRTKTKKG KPKTAMRIDV PATNPTRAIT AITSMLWEDL VNNPTGDFLH KRKLQCAEKI IRSAFVELYK GLGLLKTYSS
301: LNMVAFTKIL KKFDKVSCQK ASANYLKEVK RSHFVSSDKA FGLMDEVESI FTKHFANNDR KKAMKFLRPQ QHKDSHMVTF LFGLSTGCFV SLFCVYAILA
401: HLCGIFSSSN EPAYMETVYP VFSVFTLLSL HLFMYGCNLF MWKNTRINYN FIFEFSPSTA LKHRDAFLIS TTLMTTVIGA MVIHLLLRAA NFSPTEIDAI
501: PGILLLFFIA LLICPFDIFY RPTRYCFIRV ICNIVCSPFY KVLLVDFFMA DQLTSQIPLL RHLETAGCHI FARAFKTHHP DTCHSGRVYM EITYIISFLP
601: YYWRALQCAR RWFDDGDVNH LANMGKYVSA MVAAGARVTY SRQNDHLWFA IVLITSVVAT MYQLYWDFIK DWGFLNPKSI NPWLRDDLIL KNKSIYYMSI
701: VLNIVLRVTW VETIMHFKVG RAQSRLLEFL LAALEVIRRG HWNFYRLENE HLNNVGHYRA VKTVPLPFRE VDSD

Best Arabidopsis Sequence Match ( AT3G23430.1 )
(BLAST)

001: MVKFSKELEA QLIPEWKEAF VNYCLLKKQI KKIKTSRKPK PASHYPIGHH SDFGRSLFDP VRKLARTFSD KLFSNSEKPE ILQVRRRRGS SETGDDVDEI
101: YQTELVQLFS EEDEVKVFFA RLDEELNKVN QFHKPKETEF LERGEILKKQ LETLAELKQI LSDRKKRNLS GSNSHRSFSS SVRNSDFSAG SPGELSEIQS
201: ETSRTDEIIE ALERNGVSFI NSATRSKTKG GKPKMSLRVD IPDAVAGAEG GIARSIATAM SVLWEELVNN PRSDFTNWKN IQSAEKKIRS AFVELYRGLG
301: LLKTYSSLNM IAFTKIMKKF DKVAGQNASS TYLKVVKRSQ FISSDKVVRL MDEVESIFTK HFANNDRKKA MKFLKPHQTK DSHMVTFFVG LFTGCFISLF
401: VIYIILAHLS GIFTSSDQVS YLETVYPVFS VFALLSLHMF MYGCNLYMWK NTRINYTFIF EFAPNTALRY RDAFLMGTTF MTSVVAAMVI HLILRASGFS
501: ASQVDTIPGI LLLIFICVLI CPFNTFYRPT RFCFIRILRK IVCSPFYKVL MVDFFMGDQL TSQIPLLRHL ETTGCYFLAQ SFKTHEYNTC KNGRYYREFA
601: YLISFLPYFW RAMQCVRRWW DESNPDHLIN MGKYVSAMVA AGVRITYARE NNDLWLTMVL VSSVVATIYQ LYWDFVKDWG LLNPKSKNPW LRDNLVLRNK
701: NFYYLSIALN LVLRVAWIET IMRFRVSPVQ SHLLDFFLAS LEVIRRGHWN FYRVENEHLN NVGQFRAVKT VPLPFLDRDS DG

Arabidopsis Description

PHO1Phosphate transporter PHO1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S403]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.