Factsheet for GSMUA_Achr1P20470_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P00220_001
GSMUA_Achr9P06210_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23430.1	GSMUA_Achr9P00220_001	AT2G33770.1	22634761
AT3G23430.1	GSMUA_Achr9P06210_001	AT2G33770.1	22634761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P36590_001	Banana	cytosol	77.82	75.52
TraesCS6D01G364200.1	Wheat	mitochondrion	40.94	66.19
Zm00001d051945_P001	Maize	peroxisome, plasma membrane, plastid	45.75	65.28
CDY09011	Canola	cytosol, peroxisome, plasma membrane	46.39	61.2
VIT_05s0049g01410.t01	Wine grape	cytosol	60.58	59.97
TraesCS6A01G380000.1	Wheat	cytosol	60.58	59.82
TraesCS6B01G418600.1	Wheat	cytosol, nucleus, plasma membrane	60.46	59.77
TraesCS6D01G364600.1	Wheat	plastid	60.46	59.62
TraesCS6D01G364100.1	Wheat	cytosol	59.57	59.49
Os02t0809800-01	Rice	cytosol	61.22	59.26
HORVU6Hr1G089190.23	Barley	cytosol	60.71	59.21
KRH69098	Soybean	cytosol	57.03	58.98
PGSC0003DMT400044207	Potato	cytosol, nucleus, plasma membrane	58.94	58.86
TraesCS6A01G379700.1	Wheat	cytosol	59.57	58.82
KRH31683	Soybean	cytosol, nucleus, plasma membrane	56.91	58.77
Solyc09g090360.2.1	Tomato	cytosol	58.68	58.76
HORVU6Hr1G089130.9	Barley	cytosol	60.08	58.59
KRG92358	Soybean	cytosol	57.41	58.53
KRH34432	Soybean	cytosol	57.29	58.4
TraesCS6D01G364300.1	Wheat	cytosol	57.54	58.21
TraesCS6B01G418000.1	Wheat	cytosol	57.29	57.87
EES07731	Sorghum	cytosol, nucleus, plasma membrane	58.94	57.27
Zm00001d018445_P004	Maize	cytosol, nucleus, plasma membrane	58.3	57.14
Bra023727.1-P	Field mustard	cytosol	56.78	57.14
Bra014948.1-P	Field mustard	cytosol	56.4	56.76
CDX85098	Canola	cytosol, peroxisome, plasma membrane	40.3	56.38
TraesCS6B01G418100.2	Wheat	cytosol, peroxisome, plasma membrane	58.17	56.32
AT3G23430.1	Thale cress	cytosol, nucleus, plasma membrane	55.13	55.63
KRH72033	Soybean	cytosol, extracellular, golgi	8.75	55.2
CDX77515	Canola	cytosol	56.53	54.93
KRH07887	Soybean	extracellular, golgi, mitochondrion, plasma membrane	7.48	50.43
GSMUA_Achr1P20650_001	Banana	cytosol	48.29	47.86
CDY18123	Canola	cytosol	45.25	46.79
CDY09013	Canola	nucleus	10.27	40.91
GSMUA_Achr7P00360_001	Banana	plasma membrane	14.07	23.37
GSMUA_Achr4P23610_001	Banana	plasma membrane	13.69	22.64

Protein Annotations

EnsemblPlants:GSMUA_Achr1P20470_001	EnsemblPlants:GSMUA_Achr1T20470_001	EnsemblPlantsGene:GSMUA_Achr1G20470_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:EXS_C	InterPro:IPR004331	InterPro:IPR004342	InterPro:SPX_dom	ncoils:Coil	PANTHER:PTHR10783
PANTHER:PTHR10783:SF80	PFAM:PF03105	PFAM:PF03124	PFscan:PS51380	PFscan:PS51382	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002953459	UniProt:M0S1K5	MapMan:24.2.7.4	MapMan:25.3.2.2	:

Description

Phosphate transporter PHO1-2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G20470_001]

Coordinates

chr1:+:15415216..15420477

Molecular Weight (calculated)

90170.5 Da

IEP (calculated)

9.815

GRAVY (calculated)

-0.068

Length

789 amino acids

Sequence
(BLAST)

001: MVKFSRELQA QLIPEWKDAF VDYRQLKKHV KKIKLSLLRS SFPSSSSSVD HHNGGGGFSL FDPVRAFAAR FSAPRSDLPP SVWSSRHRSL CSFDIDEENL
101: FEMVPVQSRE DEVKEFLEKL EQELEKVNGF YTNKENEFCD RGEILSKQLQ ILVDLKQLLH EHRRRRHQRN APPSPAGGSV TSLLSSASSF SVEGEPESPA
201: AGTEERDSLS DEVIATLERN GVSFLGLGKA KAKKAGKLRT ATSLRIDIPP TTPARAISMV WEDLVNSSRK EGSVGGDHVN RKKLLRAEKM IREAYVQLYR
301: GHDLLTTYSS LNMEAFRKIL KKFQKVSNQR RESATFLKKV KRSHFVSSDK VIKLADEVES IFTKHFAGSD RKKAMKFLRP QKPRESHTIT FFVGLFTGSF
401: VTLFVVYAIL AHLCGIFSSS SSDEAGYMET VYPIFSMFAL LSLHIFLYGC NIFAWRGTRI NHNFIFEFSP NTVLKHRDAF LISASLMTAV VSALVVHLLL
501: RSAGVSQRHV DAIPGALLLV FTALLLCPFN IFYRSTRYCF LRVMRNIAFS PLYKVLMVDF FMADQLTSQI PLLRHMELTT CYFMAAGFKV HPYETCTRSH
601: QYKILAYIIS FLPYYWRAMQ CVRRYIEEGY DVNHLANAGK YVSAMVAAAA KLKYAVEPTP LWMVIVVITS TGATIYQLFW DFVKDWGLLD LSSKNLFLRD
701: DLILKNKCVY YVSIVLNFVL RLAWIQSVMR LTMGQAEHRL MDFLLASLEI IRRGHWNFYR LENEHLNNVG KFRAVKTVPL PFCELASDD

Best Arabidopsis Sequence Match ( AT3G23430.1 )
(BLAST)

001: MVKFSKELEA QLIPEWKEAF VNYCLLKKQI KKIKTSRKPK PASHYPIGHH SDFGRSLFDP VRKLARTFSD KLFSNSEKPE ILQVRRRRGS SETGDDVDEI
101: YQTELVQLFS EEDEVKVFFA RLDEELNKVN QFHKPKETEF LERGEILKKQ LETLAELKQI LSDRKKRNLS GSNSHRSFSS SVRNSDFSAG SPGELSEIQS
201: ETSRTDEIIE ALERNGVSFI NSATRSKTKG GKPKMSLRVD IPDAVAGAEG GIARSIATAM SVLWEELVNN PRSDFTNWKN IQSAEKKIRS AFVELYRGLG
301: LLKTYSSLNM IAFTKIMKKF DKVAGQNASS TYLKVVKRSQ FISSDKVVRL MDEVESIFTK HFANNDRKKA MKFLKPHQTK DSHMVTFFVG LFTGCFISLF
401: VIYIILAHLS GIFTSSDQVS YLETVYPVFS VFALLSLHMF MYGCNLYMWK NTRINYTFIF EFAPNTALRY RDAFLMGTTF MTSVVAAMVI HLILRASGFS
501: ASQVDTIPGI LLLIFICVLI CPFNTFYRPT RFCFIRILRK IVCSPFYKVL MVDFFMGDQL TSQIPLLRHL ETTGCYFLAQ SFKTHEYNTC KNGRYYREFA
601: YLISFLPYFW RAMQCVRRWW DESNPDHLIN MGKYVSAMVA AGVRITYARE NNDLWLTMVL VSSVVATIYQ LYWDFVKDWG LLNPKSKNPW LRDNLVLRNK
701: NFYYLSIALN LVLRVAWIET IMRFRVSPVQ SHLLDFFLAS LEVIRRGHWN FYRVENEHLN NVGQFRAVKT VPLPFLDRDS DG

Arabidopsis Description

PHO1Phosphate transporter PHO1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S403]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.