Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G388400.1 | |
| TraesCS1B01G415800.1 | |
| TraesCS1D01G396300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G23430.1 | TraesCS1A01G388400.1 | AT2G33770.1 | 22634761 |
| AT3G23430.1 | TraesCS1B01G415800.1 | AT2G33770.1 | 22634761 |
| AT3G23430.1 | TraesCS1D01G396300.1 | AT2G33770.1 | 22634761 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G364200.1 | Wheat | mitochondrion | 56.92 | 90.98 |
| TraesCS6B01G418100.2 | Wheat | cytosol, peroxisome, plasma membrane | 95.0 | 90.92 |
| TraesCS6D01G364600.1 | Wheat | plastid | 88.72 | 86.5 |
| TraesCS6D01G364100.1 | Wheat | cytosol | 87.44 | 86.33 |
| HORVU6Hr1G089190.23 | Barley | cytosol | 88.59 | 85.41 |
| HORVU6Hr1G089130.9 | Barley | cytosol | 87.82 | 84.67 |
| Os02t0809800-01 | Rice | cytosol | 79.23 | 75.83 |
| Zm00001d051945_P001 | Maize | peroxisome, plasma membrane, plastid | 53.46 | 75.41 |
| EES07731 | Sorghum | cytosol, nucleus, plasma membrane | 75.64 | 72.66 |
| Zm00001d018445_P004 | Maize | cytosol, nucleus, plasma membrane | 74.1 | 71.8 |
| GSMUA_Achr1P20470_001 | Banana | nucleus | 58.21 | 57.54 |
| CDY09011 | Canola | cytosol, peroxisome, plasma membrane | 43.21 | 56.35 |
| KRH72033 | Soybean | cytosol, extracellular, golgi | 8.59 | 53.6 |
| GSMUA_Achr6P36590_001 | Banana | cytosol | 55.51 | 53.26 |
| VIT_05s0049g01410.t01 | Wine grape | cytosol | 53.33 | 52.2 |
| Bra023727.1-P | Field mustard | cytosol | 52.44 | 52.17 |
| Bra014948.1-P | Field mustard | cytosol | 51.92 | 51.66 |
| CDX85098 | Canola | cytosol, peroxisome, plasma membrane | 37.18 | 51.42 |
| KRH31683 | Soybean | cytosol, nucleus, plasma membrane | 50.26 | 51.31 |
| KRH34432 | Soybean | cytosol | 50.64 | 51.03 |
| KRG92358 | Soybean | cytosol | 50.51 | 50.9 |
| PGSC0003DMT400044207 | Potato | cytosol, nucleus, plasma membrane | 51.41 | 50.76 |
| Solyc09g090360.2.1 | Tomato | cytosol | 51.15 | 50.63 |
| AT3G23430.1 | Thale cress | cytosol, nucleus, plasma membrane | 50.64 | 50.51 |
| KRH69098 | Soybean | cytosol | 49.23 | 50.33 |
| CDX77515 | Canola | cytosol | 51.79 | 49.75 |
| KRH07887 | Soybean | extracellular, golgi, mitochondrion, plasma membrane | 7.05 | 47.01 |
| CDY18123 | Canola | cytosol | 42.56 | 43.51 |
| TraesCS7D01G231300.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.05 | 38.36 |
| CDY09013 | Canola | nucleus | 9.1 | 35.86 |
| TraesCS5D01G074100.1 | Wheat | plasma membrane | 12.95 | 23.82 |
| TraesCS7D01G365900.3 | Wheat | plasma membrane | 13.08 | 23.56 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G364300.1 | EnsemblPlantsGene:TraesCS6D01G364300 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:EXS_C |
| InterPro:IPR004331 | InterPro:IPR004342 | InterPro:SPX_dom | ncoils:Coil | PANTHER:PTHR10783 | PANTHER:PTHR10783:SF80 |
| PFAM:PF03105 | PFAM:PF03124 | PFscan:PS51380 | PFscan:PS51382 | SEG:seg | TIGR:cd14447 |
| TMHMM:TMhelix | MapMan:24.2.7.4 | MapMan:25.3.2.2 | : | : | : |
Description
No Description!
Coordinates
chr6D:+:454221734..454225982
Molecular Weight (calculated)
88061.9 Da
IEP (calculated)
9.433
GRAVY (calculated)
0.013
Length
780 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKFSREYEA SIIPEWKGAF VDYKCLKKLI KKIKLGRRDA DDSNGDCSLE EAALAAGVES VGYGGGFSVL DPVHALASRF APRVHVSSED EESGDSGELV
101: PPTDKHEREF LEKADEELEK VNSFYATKEA ELLGRGEAII DQLRILADVK RILADHAATR RARRTLSAVA PSSPALSGSG LATPQSMSDG SVELQQAQMT
201: EGVAVADEVM AALERNGVSF VGLPGKKDSK AGRLQLPATV RIDIPASNPG RAALKVWEEL VNVLRKDGAD PAAAFVHRKK VQHAEKNIRD AFMALYRGLE
301: LLKKFSSLNV KAFTKILKKF VKVSGQQQAT DLFSQKVKGS SFSTSDKVLQ LSDEVESLFL KHFAGNDKMV AMKYLNPKQP KSTHMITFLV GLFTGTFVSL
401: FIIYTIMAHA SGIFASVGDT AYHEVVYHVF SIFALISLHC FLYGCNLFMW KSTRINQNFI FDFVPNTALT HRDAFLMSAF IMCTVVTVLV INLFLINACV
501: PYTNAVPGAL IVLSAGLLFC PFNVFYRSTR YCFMRIMRKI IFSPFYKVVM ADFFMADQLT SQIPLLRHTE FAACYFMAGS FRAYPYETCT KNQQYKHLAY
601: VISFLPYYWR AVQCLRRYLE EHDVNQLANA GKYVSAMVAA AVRLKYKATP TPFWVWMVLI TSTGTTVYQL YWDFVKDWGF FTPKSKNLWL RDDLILKNKF
701: TYYVSMTLNL VLRLSWTKSV MKISITKNET RLLDFSRASL EIIRRGHWNF YRLENEHLNN VGKFRAVKTV PLPFCELETD
101: PPTDKHEREF LEKADEELEK VNSFYATKEA ELLGRGEAII DQLRILADVK RILADHAATR RARRTLSAVA PSSPALSGSG LATPQSMSDG SVELQQAQMT
201: EGVAVADEVM AALERNGVSF VGLPGKKDSK AGRLQLPATV RIDIPASNPG RAALKVWEEL VNVLRKDGAD PAAAFVHRKK VQHAEKNIRD AFMALYRGLE
301: LLKKFSSLNV KAFTKILKKF VKVSGQQQAT DLFSQKVKGS SFSTSDKVLQ LSDEVESLFL KHFAGNDKMV AMKYLNPKQP KSTHMITFLV GLFTGTFVSL
401: FIIYTIMAHA SGIFASVGDT AYHEVVYHVF SIFALISLHC FLYGCNLFMW KSTRINQNFI FDFVPNTALT HRDAFLMSAF IMCTVVTVLV INLFLINACV
501: PYTNAVPGAL IVLSAGLLFC PFNVFYRSTR YCFMRIMRKI IFSPFYKVVM ADFFMADQLT SQIPLLRHTE FAACYFMAGS FRAYPYETCT KNQQYKHLAY
601: VISFLPYYWR AVQCLRRYLE EHDVNQLANA GKYVSAMVAA AVRLKYKATP TPFWVWMVLI TSTGTTVYQL YWDFVKDWGF FTPKSKNLWL RDDLILKNKF
701: TYYVSMTLNL VLRLSWTKSV MKISITKNET RLLDFSRASL EIIRRGHWNF YRLENEHLNN VGKFRAVKTV PLPFCELETD
001: MKFGKDFVRQ MIPEWQQAYM DYAGLKSILQ EIQTSRKRSE RPGILKRKLS GSRNFSGLTK RYSRTASTRE PEIQDILVHA TTGDDGFERY ETTILEVAEA
101: GRESELAFFK TLDLEFDKVN HFYRSKVEEM VKEAVVLNKQ MDALIAFRIK VERPSSSWSC SETVSVDMNA LDSNDQRNTL AEEMGIRVEG NGSNGGDSTK
201: ESVPQVLSVL ERIRLNKTQE TPLSTIKNVL KLSNQEELKF TRENLKKIEE RLKNVFIEFY RKLRHLKNYS FLNTLAISKI MKKYDKIASR SAAKPYMEMV
301: DKSYLTSSDE INKLMLRVES TFVEHFAGLN RSKGMNLLRP KVKKEKHRIT FSTGFFVGCT VSLVVALVMF IHARNIMGAV GHKVYMETMF PLYSLFAFVV
401: LHMIMYASNI YFWKRYRVNY PFIFGFKEGT ELGYRHVLLL SFGLGTLALC AVLINLDMEM DPNTNDYKTM TELLPMFILA LVVAILFCPF NIFYRSSRVF
501: FLMVVFRCIA APLYKVNLPD FFLADQLTSQ VQALRSLEFY ICYYGWGDFK HRQNTCRSSD VYSTFYFIVA VIPYWSRFLQ CVRRLIEEND SSQGYNALKY
601: LLTVVAVCLR TAYSFNRGNI WKISAWVFSA LATFYGTYWD IVFDWGLLHR PSKHLLREKL LVPHKAVYYV AIVLNIVLRM AWLQTVLDFN LSFLHRETMI
701: ALLAALEIIR RGIWNFFRLE NEHLNNVGKF RAFKSVPLPF NYNEEEDRDS
101: GRESELAFFK TLDLEFDKVN HFYRSKVEEM VKEAVVLNKQ MDALIAFRIK VERPSSSWSC SETVSVDMNA LDSNDQRNTL AEEMGIRVEG NGSNGGDSTK
201: ESVPQVLSVL ERIRLNKTQE TPLSTIKNVL KLSNQEELKF TRENLKKIEE RLKNVFIEFY RKLRHLKNYS FLNTLAISKI MKKYDKIASR SAAKPYMEMV
301: DKSYLTSSDE INKLMLRVES TFVEHFAGLN RSKGMNLLRP KVKKEKHRIT FSTGFFVGCT VSLVVALVMF IHARNIMGAV GHKVYMETMF PLYSLFAFVV
401: LHMIMYASNI YFWKRYRVNY PFIFGFKEGT ELGYRHVLLL SFGLGTLALC AVLINLDMEM DPNTNDYKTM TELLPMFILA LVVAILFCPF NIFYRSSRVF
501: FLMVVFRCIA APLYKVNLPD FFLADQLTSQ VQALRSLEFY ICYYGWGDFK HRQNTCRSSD VYSTFYFIVA VIPYWSRFLQ CVRRLIEEND SSQGYNALKY
601: LLTVVAVCLR TAYSFNRGNI WKISAWVFSA LATFYGTYWD IVFDWGLLHR PSKHLLREKL LVPHKAVYYV AIVLNIVLRM AWLQTVLDFN LSFLHRETMI
701: ALLAALEIIR RGIWNFFRLE NEHLNNVGKF RAFKSVPLPF NYNEEEDRDS
Arabidopsis Description
PHO1-H7Phosphate transporter PHO1 homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.