Factsheet for VIT_05s0049g01410.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0265g00070.t01
VIT_00s1927g00020.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23430.1	VIT_00s0265g00070.t01	AT2G33770.1	22634761
AT3G23430.1	VIT_00s1927g00020.t01	AT2G33770.1	22634761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09011	Canola	cytosol, peroxisome, plasma membrane	56.46	75.25
PGSC0003DMT400044207	Potato	cytosol, nucleus, plasma membrane	73.78	74.43
Solyc09g090360.2.1	Tomato	cytosol	73.4	74.24
KRH34432	Soybean	cytosol	69.51	71.58
Bra014948.1-P	Field mustard	cytosol	70.14	71.3
Bra023727.1-P	Field mustard	cytosol	70.01	71.17
KRG92358	Soybean	cytosol	68.88	70.93
KRH31683	Soybean	cytosol, nucleus, plasma membrane	67.25	70.16
KRH69098	Soybean	cytosol	66.62	69.59
AT3G23430.1	Thale cress	cytosol, nucleus, plasma membrane	68.0	69.31
CDX77515	Canola	cytosol	70.26	68.97
CDX85098	Canola	cytosol, peroxisome, plasma membrane	48.43	68.44
KRH72033	Soybean	cytosol, extracellular, golgi	10.16	64.8
TraesCS6D01G364200.1	Wheat	mitochondrion	38.02	62.09
GSMUA_Achr1P20470_001	Banana	nucleus	59.97	60.58
KRH07887	Soybean	extracellular, golgi, mitochondrion, plasma membrane	8.78	59.83
Zm00001d051945_P001	Maize	peroxisome, plasma membrane, plastid	41.41	59.67
CDY18123	Canola	cytosol	54.96	57.41
GSMUA_Achr6P36590_001	Banana	cytosol	57.21	56.09
CDY09013	Canola	nucleus	13.8	55.56
TraesCS6B01G418600.1	Wheat	cytosol, nucleus, plasma membrane	54.58	54.51
TraesCS6D01G364100.1	Wheat	cytosol	53.83	54.3
TraesCS6D01G364600.1	Wheat	plastid	54.45	54.25
Os02t0809800-01	Rice	cytosol	55.46	54.23
TraesCS6A01G380000.1	Wheat	cytosol	54.08	53.94
TraesCS6A01G379700.1	Wheat	cytosol	53.83	53.69
HORVU6Hr1G089190.23	Barley	cytosol	54.45	53.65
Zm00001d018445_P004	Maize	cytosol, nucleus, plasma membrane	54.08	53.54
HORVU6Hr1G089130.9	Barley	cytosol	54.2	53.4
TraesCS6D01G364300.1	Wheat	cytosol	52.2	53.33
TraesCS6B01G418000.1	Wheat	cytosol	51.94	53.01
EES07731	Sorghum	cytosol, nucleus, plasma membrane	53.7	52.71
TraesCS6B01G418100.2	Wheat	cytosol, peroxisome, plasma membrane	52.45	51.29
VIT_01s0011g02520.t01	Wine grape	cytosol	50.69	51.14
VIT_00s0186g00110.t01	Wine grape	extracellular, golgi	8.16	48.87
VIT_14s0108g01130.t01	Wine grape	nucleus, peroxisome, plasma membrane	26.85	33.44
VIT_01s0182g00130.t01	Wine grape	cytosol	32.0	32.73
VIT_01s0182g00140.t01	Wine grape	cytosol, nucleus, plasma membrane	32.5	32.5
VIT_01s0182g00150.t01	Wine grape	cytosol	32.87	32.23
VIT_00s1333g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	31.87	31.99
VIT_01s0182g00060.t01	Wine grape	cytosol	31.49	31.65
VIT_12s0059g02490.t01	Wine grape	plastid	14.68	24.79

Protein Annotations

EntrezGene:100244364	wikigene:100244364	MapMan:24.2.7.4	MapMan:25.3.2.2	ProteinID:CBI23677	ProteinID:CBI23677.3
ncoils:Coil	UniProt:D7SZK0	InterPro:EXS_C	EMBL:FN595496	GO:GO:0000822	GO:GO:0003674
GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0005802	GO:GO:0005886	GO:GO:0006799	GO:GO:0006810	GO:GO:0006817
GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009605	GO:GO:0009987	GO:GO:0009991	GO:GO:0015114	GO:GO:0016020	GO:GO:0016021
GO:GO:0016036	GO:GO:0035435	GO:GO:0048016	InterPro:IPR004331	InterPro:IPR004342	EntrezGene:LOC100244364
wikigene:LOC100244364	PFAM:PF03105	PFAM:PF03124	PFscan:PS51380	PFscan:PS51382	PANTHER:PTHR10783
PANTHER:PTHR10783:SF80	InterPro:SPX_dom	TMHMM:TMhelix	UniParc:UPI0001BE2785	ArrayExpress:VIT_05s0049g01410	EnsemblPlantsGene:VIT_05s0049g01410
EnsemblPlants:VIT_05s0049g01410.t01	unigene:Vvi.22178	RefSeq:XP_002285337	RefSeq:XP_002285337.1	RefSeq:XP_010650117.1	SEG:seg

Description

No Description!

Coordinates

chr5:-:8695011..8700349

Molecular Weight (calculated)

92584.7 Da

IEP (calculated)

9.099

GRAVY (calculated)

-0.262

Length

797 amino acids

Sequence
(BLAST)

001: MVKFSKELEA QLIPEWKDAF VNYWQLKKNI KKIKLSRIPK QTQDIDTNFG LSILDPIRSL VKKIRHKFPN PHDKADTIQV RSNKAIEGGE KDEDEEEQQH
101: HHGKEEEEEE DQVSESDELV QLFSEEDEVR MFFERLDEEL DKVNQFYRTK ETEFLERGEN LNKQLQNLLD LKQILTDRQR KNFQSRSNSG HLLRSWSSSA
201: RNSDLSESPT EFEETPGQTP ETDSVIAALE RNGVNFIGSE VRSKTKNGKP KMSMRIDIPT TTPTRSISAV TSMLWEDLVN NPKKEGAGDF INRKKIQCAE
301: KMIRGAFVEL YRGLGLLKTY SSLNMVAFIK ILKKFDKVSN QQASGNYLKS VKRSHFISSD KVVRLMDEVE SIFTRHFANN DRKKAMKFLR PQHHRDSHMV
401: TFFVGLFTGC FVSLFSVYAI LAHLSGLFSP GTEAGYMETV YPVFSAFALL SLHLFMYGCN LFMWKSTRIN YNFIFEFTPS TALKYRDAFL ICTSFMTAVV
501: GAMVVHLLLR SSGFSPTQVD AIPGFLLLFV IGLLICPFNI FYRPTRYCFL RIIRNIVCSP FYKVLMVDFF MADQLTSQIP LLRHMESTAC YFLARSFRTH
601: RYETCKSGRL YRELAYVISF APYYWRAMQC ARRWFDECDP KHLANMGKYV SAMVAAGARI TYANQKTELW LVVVLVTSVL ATVYQLYWDF VQDWNLLNPK
701: SKNPWLRDDL ILKNKSIYYV SIVLNLVLRV AWVETVTRFN VGMLESRMLD FFLASLEVIR RGHWNFYRLE NEHLNNVGKF RAVNAVPLPF RETDSDG

Best Arabidopsis Sequence Match ( AT3G23430.1 )
(BLAST)

001: MVKFSKELEA QLIPEWKEAF VNYCLLKKQI KKIKTSRKPK PASHYPIGHH SDFGRSLFDP VRKLARTFSD KLFSNSEKPE ILQVRRRRGS SETGDDVDEI
101: YQTELVQLFS EEDEVKVFFA RLDEELNKVN QFHKPKETEF LERGEILKKQ LETLAELKQI LSDRKKRNLS GSNSHRSFSS SVRNSDFSAG SPGELSEIQS
201: ETSRTDEIIE ALERNGVSFI NSATRSKTKG GKPKMSLRVD IPDAVAGAEG GIARSIATAM SVLWEELVNN PRSDFTNWKN IQSAEKKIRS AFVELYRGLG
301: LLKTYSSLNM IAFTKIMKKF DKVAGQNASS TYLKVVKRSQ FISSDKVVRL MDEVESIFTK HFANNDRKKA MKFLKPHQTK DSHMVTFFVG LFTGCFISLF
401: VIYIILAHLS GIFTSSDQVS YLETVYPVFS VFALLSLHMF MYGCNLYMWK NTRINYTFIF EFAPNTALRY RDAFLMGTTF MTSVVAAMVI HLILRASGFS
501: ASQVDTIPGI LLLIFICVLI CPFNTFYRPT RFCFIRILRK IVCSPFYKVL MVDFFMGDQL TSQIPLLRHL ETTGCYFLAQ SFKTHEYNTC KNGRYYREFA
601: YLISFLPYFW RAMQCVRRWW DESNPDHLIN MGKYVSAMVA AGVRITYARE NNDLWLTMVL VSSVVATIYQ LYWDFVKDWG LLNPKSKNPW LRDNLVLRNK
701: NFYYLSIALN LVLRVAWIET IMRFRVSPVQ SHLLDFFLAS LEVIRRGHWN FYRVENEHLN NVGQFRAVKT VPLPFLDRDS DG

Arabidopsis Description

PHO1Phosphate transporter PHO1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S403]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.