Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G085570.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G23430.1 | HORVU1Hr1G085570.2 | AT2G33770.1 | 22634761 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G089190.23 | Barley | cytosol | 97.9 | 97.9 |
| TraesCS6B01G418600.1 | Wheat | cytosol, nucleus, plasma membrane | 93.33 | 94.61 |
| TraesCS6A01G380000.1 | Wheat | cytosol | 93.08 | 94.24 |
| TraesCS6D01G364600.1 | Wheat | plastid | 93.08 | 94.12 |
| TraesCS6A01G379700.1 | Wheat | cytosol | 92.95 | 94.12 |
| TraesCS6D01G364100.1 | Wheat | cytosol | 91.59 | 93.8 |
| TraesCS6D01G364200.1 | Wheat | mitochondrion | 54.14 | 89.75 |
| TraesCS6B01G418000.1 | Wheat | cytosol | 85.41 | 88.48 |
| TraesCS6D01G364300.1 | Wheat | cytosol | 84.67 | 87.82 |
| TraesCS6B01G418100.2 | Wheat | cytosol, peroxisome, plasma membrane | 84.8 | 84.17 |
| Zm00001d051945_P001 | Maize | peroxisome, plasma membrane, plastid | 54.51 | 79.75 |
| Os02t0809800-01 | Rice | cytosol | 80.1 | 79.51 |
| EES07731 | Sorghum | cytosol, nucleus, plasma membrane | 76.76 | 76.48 |
| Zm00001d018445_P004 | Maize | cytosol, nucleus, plasma membrane | 75.03 | 75.4 |
| GSMUA_Achr1P20470_001 | Banana | nucleus | 58.59 | 60.08 |
| CDY09011 | Canola | cytosol, peroxisome, plasma membrane | 43.76 | 59.2 |
| KRH72033 | Soybean | cytosol, extracellular, golgi | 8.53 | 55.2 |
| Bra023727.1-P | Field mustard | cytosol | 53.4 | 55.1 |
| GSMUA_Achr6P36590_001 | Banana | cytosol | 55.25 | 54.98 |
| Bra014948.1-P | Field mustard | cytosol | 52.53 | 54.21 |
| VIT_05s0049g01410.t01 | Wine grape | cytosol | 53.4 | 54.2 |
| CDX85098 | Canola | cytosol, peroxisome, plasma membrane | 37.7 | 54.08 |
| KRH31683 | Soybean | cytosol, nucleus, plasma membrane | 50.93 | 53.93 |
| KRH34432 | Soybean | cytosol | 50.68 | 52.97 |
| Solyc09g090360.2.1 | Tomato | cytosol | 51.55 | 52.92 |
| PGSC0003DMT400044207 | Potato | cytosol, nucleus, plasma membrane | 51.67 | 52.91 |
| KRG92358 | Soybean | cytosol | 50.56 | 52.84 |
| AT3G23430.1 | Thale cress | cytosol, nucleus, plasma membrane | 51.05 | 52.81 |
| KRH69098 | Soybean | cytosol | 49.57 | 52.56 |
| CDX77515 | Canola | cytosol | 52.41 | 52.22 |
| KRH07887 | Soybean | extracellular, golgi, mitochondrion, plasma membrane | 7.05 | 48.72 |
| CDY18123 | Canola | cytosol | 43.76 | 46.4 |
| CDY09013 | Canola | nucleus | 9.39 | 38.38 |
| HORVU7Hr1G047210.9 | Barley | cytosol, peroxisome, plasma membrane | 41.53 | 38.23 |
| HORVU5Hr1G016790.15 | Barley | peroxisome, plastid | 13.23 | 21.31 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G089130.9 | EnsemblPlantsGene:HORVU6Hr1G089130 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:EXS_C |
| InterPro:IPR004331 | InterPro:IPR004342 | InterPro:SPX_dom | ncoils:Coil | PANTHER:PTHR10783 | PANTHER:PTHR10783:SF80 |
| PFAM:PF03105 | PFAM:PF03124 | PFscan:PS51380 | PFscan:PS51382 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000B467EDB | UniProt:A0A287V412 | MapMan:24.2.7.4 | MapMan:25.3.2.2 | : | : |
Description
No Description!
Coordinates
chrchr6H:+:568225128..568231058
Molecular Weight (calculated)
91541.7 Da
IEP (calculated)
9.677
GRAVY (calculated)
-0.082
Length
809 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKFSREYEA SIIPEWKGAF VDYKCLKKLV KKIKVARREA DDDSSAGGSS PETAALAAGV ESVGYGAGFS MLDPVRALAA RFGPRVQAST SSIDVHSGLQ
101: DDEESGDSRE LVRSTDKHER EFLEKADEEL EKVNTFYASQ ETELLGRGEA LIDQLRILAD VKRILADHAA TRRARGSLLG RSRSMPPVAP PSPALSNSGR
201: YLLSGLATPQ SMSDGSVEQQ QAQMTEGAAV ADEVMAALER NGVSFVRLPG KKDAKKDGGN RRLQLPSTVR IDIPASNPGR AALKVWEELV NVLRKDGADP
301: AAAFVHRKKV QHAEKNIRDA FMALYRGLEL LKKFSSLNVK AFTKILKKFV KVSEQQRATE LFSQEVKRSS FSTSDKVLQL SDEVESLFLK HFAGNDRMVA
401: MKYLNPQQPK NTHMITFLVG LFTGTFVSLF IIYAILAHVS GIFASAGNTA YMEVVYHVFS MFALISLHCF LYGCNLFMWK STRINQNFIF DFAPDTALTH
501: RDAFLMSASI MCTVVAALVI NLFLRNAGAS YANAVPGGLI VLSAGLLFYP FNVFYRSTRY CFMRIMRNII FSPFYKVLMA DFFMADQLTS QIPLLRHMEF
601: AACYFMAGSF RANPYENCTN SQQYKHLAYF ISFLPYYWRA MQCLRRYIEE HDVNQLANAG KYVSAMVAAA VRFKYNVTPT PFWMWMVLIS SAGATVYQLY
701: WDFVKDWGFF TPKSKNLWLR DDLILKNKFT YYVSMMLNLV LRLAWTESVM KIRVSKNETR LLDFSLASME IIRRGHWNFY RLENEHLNNV GKFRAVKTVP
801: LPFRELETD
101: DDEESGDSRE LVRSTDKHER EFLEKADEEL EKVNTFYASQ ETELLGRGEA LIDQLRILAD VKRILADHAA TRRARGSLLG RSRSMPPVAP PSPALSNSGR
201: YLLSGLATPQ SMSDGSVEQQ QAQMTEGAAV ADEVMAALER NGVSFVRLPG KKDAKKDGGN RRLQLPSTVR IDIPASNPGR AALKVWEELV NVLRKDGADP
301: AAAFVHRKKV QHAEKNIRDA FMALYRGLEL LKKFSSLNVK AFTKILKKFV KVSEQQRATE LFSQEVKRSS FSTSDKVLQL SDEVESLFLK HFAGNDRMVA
401: MKYLNPQQPK NTHMITFLVG LFTGTFVSLF IIYAILAHVS GIFASAGNTA YMEVVYHVFS MFALISLHCF LYGCNLFMWK STRINQNFIF DFAPDTALTH
501: RDAFLMSASI MCTVVAALVI NLFLRNAGAS YANAVPGGLI VLSAGLLFYP FNVFYRSTRY CFMRIMRNII FSPFYKVLMA DFFMADQLTS QIPLLRHMEF
601: AACYFMAGSF RANPYENCTN SQQYKHLAYF ISFLPYYWRA MQCLRRYIEE HDVNQLANAG KYVSAMVAAA VRFKYNVTPT PFWMWMVLIS SAGATVYQLY
701: WDFVKDWGFF TPKSKNLWLR DDLILKNKFT YYVSMMLNLV LRLAWTESVM KIRVSKNETR LLDFSLASME IIRRGHWNFY RLENEHLNNV GKFRAVKTVP
801: LPFRELETD
001: MVKFSKELEA QLIPEWKEAF VNYCLLKKQI KKIKTSRKPK PASHYPIGHH SDFGRSLFDP VRKLARTFSD KLFSNSEKPE ILQVRRRRGS SETGDDVDEI
101: YQTELVQLFS EEDEVKVFFA RLDEELNKVN QFHKPKETEF LERGEILKKQ LETLAELKQI LSDRKKRNLS GSNSHRSFSS SVRNSDFSAG SPGELSEIQS
201: ETSRTDEIIE ALERNGVSFI NSATRSKTKG GKPKMSLRVD IPDAVAGAEG GIARSIATAM SVLWEELVNN PRSDFTNWKN IQSAEKKIRS AFVELYRGLG
301: LLKTYSSLNM IAFTKIMKKF DKVAGQNASS TYLKVVKRSQ FISSDKVVRL MDEVESIFTK HFANNDRKKA MKFLKPHQTK DSHMVTFFVG LFTGCFISLF
401: VIYIILAHLS GIFTSSDQVS YLETVYPVFS VFALLSLHMF MYGCNLYMWK NTRINYTFIF EFAPNTALRY RDAFLMGTTF MTSVVAAMVI HLILRASGFS
501: ASQVDTIPGI LLLIFICVLI CPFNTFYRPT RFCFIRILRK IVCSPFYKVL MVDFFMGDQL TSQIPLLRHL ETTGCYFLAQ SFKTHEYNTC KNGRYYREFA
601: YLISFLPYFW RAMQCVRRWW DESNPDHLIN MGKYVSAMVA AGVRITYARE NNDLWLTMVL VSSVVATIYQ LYWDFVKDWG LLNPKSKNPW LRDNLVLRNK
701: NFYYLSIALN LVLRVAWIET IMRFRVSPVQ SHLLDFFLAS LEVIRRGHWN FYRVENEHLN NVGQFRAVKT VPLPFLDRDS DG
101: YQTELVQLFS EEDEVKVFFA RLDEELNKVN QFHKPKETEF LERGEILKKQ LETLAELKQI LSDRKKRNLS GSNSHRSFSS SVRNSDFSAG SPGELSEIQS
201: ETSRTDEIIE ALERNGVSFI NSATRSKTKG GKPKMSLRVD IPDAVAGAEG GIARSIATAM SVLWEELVNN PRSDFTNWKN IQSAEKKIRS AFVELYRGLG
301: LLKTYSSLNM IAFTKIMKKF DKVAGQNASS TYLKVVKRSQ FISSDKVVRL MDEVESIFTK HFANNDRKKA MKFLKPHQTK DSHMVTFFVG LFTGCFISLF
401: VIYIILAHLS GIFTSSDQVS YLETVYPVFS VFALLSLHMF MYGCNLYMWK NTRINYTFIF EFAPNTALRY RDAFLMGTTF MTSVVAAMVI HLILRASGFS
501: ASQVDTIPGI LLLIFICVLI CPFNTFYRPT RFCFIRILRK IVCSPFYKVL MVDFFMGDQL TSQIPLLRHL ETTGCYFLAQ SFKTHEYNTC KNGRYYREFA
601: YLISFLPYFW RAMQCVRRWW DESNPDHLIN MGKYVSAMVA AGVRITYARE NNDLWLTMVL VSSVVATIYQ LYWDFVKDWG LLNPKSKNPW LRDNLVLRNK
701: NFYYLSIALN LVLRVAWIET IMRFRVSPVQ SHLLDFFLAS LEVIRRGHWN FYRVENEHLN NVGQFRAVKT VPLPFLDRDS DG
Arabidopsis Description
PHO1Phosphate transporter PHO1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S403]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.