CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10881
KRH20454
KRH21442
KRH50043

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23430.1	KRH10881	AT2G33770.1	22634761
AT3G23430.1	KRH20454	AT2G33770.1	22634761
AT3G23430.1	KRH21442	AT2G33770.1	22634761
AT3G23430.1	KRH50043	AT2G33770.1	22634761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69098	Soybean	cytosol	93.72	93.84
KRH34432	Soybean	cytosol	79.06	78.04
KRG92358	Soybean	cytosol	78.27	77.26
KRH72033	Soybean	cytosol, extracellular, golgi	12.43	76.0
CDY09011	Canola	cytosol, peroxisome, plasma membrane	55.1	70.4
KRH07887	Soybean	extracellular, golgi, mitochondrion, plasma membrane	10.34	67.52
VIT_05s0049g01410.t01	Wine grape	cytosol	70.16	67.25
PGSC0003DMT400044207	Potato	cytosol, nucleus, plasma membrane	69.37	67.09
Solyc09g090360.2.1	Tomato	cytosol	69.11	67.01
Bra023727.1-P	Field mustard	cytosol	68.72	66.96
Bra014948.1-P	Field mustard	cytosol	67.67	65.94
AT3G23430.1	Thale cress	cytosol, nucleus, plasma membrane	67.02	65.47
CDX85098	Canola	cytosol, peroxisome, plasma membrane	47.51	64.36
CDX77515	Canola	cytosol	67.8	63.79
TraesCS6D01G364200.1	Wheat	mitochondrion	37.7	59.02
GSMUA_Achr1P20470_001	Banana	nucleus	58.77	56.91
Zm00001d051945_P001	Maize	peroxisome, plasma membrane, plastid	40.71	56.24
GSMUA_Achr6P36590_001	Banana	cytosol	58.25	54.74
CDY18123	Canola	cytosol	54.19	54.26
CDY09013	Canola	nucleus	14.01	54.04
Os02t0809800-01	Rice	cytosol	54.97	51.53
TraesCS6D01G364600.1	Wheat	plastid	53.93	51.5
TraesCS6A01G380000.1	Wheat	cytosol	53.8	51.44
Zm00001d018445_P004	Maize	cytosol, nucleus, plasma membrane	54.19	51.43
TraesCS6D01G364100.1	Wheat	cytosol	53.14	51.39
TraesCS6B01G418600.1	Wheat	cytosol, nucleus, plasma membrane	53.66	51.38
TraesCS6A01G379700.1	Wheat	cytosol	53.4	51.06
HORVU6Hr1G089130.9	Barley	cytosol	53.93	50.93
EES07731	Sorghum	cytosol, nucleus, plasma membrane	53.93	50.74
HORVU6Hr1G089190.23	Barley	cytosol	53.66	50.68
TraesCS6D01G364300.1	Wheat	cytosol	51.31	50.26
TraesCS6B01G418000.1	Wheat	cytosol	50.79	49.68
TraesCS6B01G418100.2	Wheat	cytosol, peroxisome, plasma membrane	51.83	48.59
KRH75548	Soybean	cytosol	48.04	46.4
KRH71113	Soybean	cytosol	47.51	46.01
KRH40050	Soybean	cytosol	33.12	33.33
KRH01215	Soybean	cytosol	33.51	32.99
KRG89566	Soybean	cytosol	32.85	31.57
KRG89567	Soybean	cytosol, peroxisome, plasma membrane	32.46	31.16
KRG89568	Soybean	cytosol, peroxisome, plasma membrane	31.81	30.92
KRH50561	Soybean	endoplasmic reticulum	32.33	30.76
KRG89558	Soybean	endoplasmic reticulum	31.54	30.05
KRH70782	Soybean	cytosol	29.45	29.96
KRH30768	Soybean	golgi, plasma membrane	7.33	25.69
KRH22527	Soybean	plasma membrane	15.18	24.63
KRH00677	Soybean	plasma membrane	13.48	24.52
KRH26830	Soybean	endoplasmic reticulum, golgi	7.33	24.35
KRH40514	Soybean	plasma membrane	13.22	24.05
KRH26831	Soybean	plasma membrane	6.41	21.78

Protein Annotations

EntrezGene:100781658	MapMan:24.2.7.4	MapMan:25.3.2.2	EMBL:ACUP02006074	InterPro:EXS_C	EnsemblPlantsGene:GLYMA_10G004800
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005802
GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	UniProt:I1L7F8	InterPro:IPR004331	InterPro:IPR004342
EnsemblPlants:KRH31683	ProteinID:KRH31683	ProteinID:KRH31683.1	PFAM:PF03105	PFAM:PF03124	InterPro:PHO1_SPX
PFscan:PS51380	PFscan:PS51382	PANTHER:PTHR10783	PANTHER:PTHR10783:SF82	InterPro:SPX_dom	TMHMM:TMhelix
UniParc:UPI000296EC1A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:457173..468529

Molecular Weight (calculated)

88364.7 Da

IEP (calculated)

9.786

GRAVY (calculated)

-0.111

Length

764 amino acids

Sequence
(BLAST)

001: MVKFSKELEA QLIPEWKEAF VNYRQLKKHI KRIKLTRVSK QSQAPEESFG RSVFDSFRFI RNKFRYSDNN NLQDIIQVRR KTTEESEEVY ETELAQLFSA
101: EDEVQVFFAK LDGELNKVNQ FYKKQETEFV ERGEMLKKQL NILLDLKQIL SDRRKKNPSL KPSNTGVFPR SPGQDSNYSE SNDDNSEVSL MDEVISTLER
201: NGLSFVNSAM RVKTKKKGKP HMAIRIDIPA TTPTAVTSML WEDLVNSPMK PGYGGEFINK RKIQCAEKMI RSAFVELYKG LGLLKTYSSL NMVAFTKILK
301: KFDKVSCQKA SANYLKEVKR SHFISSDKVV RLMDEVESIF TKHFANNDRK RAMKFLRPQQ PKASHMVTFL VGLCTGCSVS LFCVYVILAH MCGIFSPSTE
401: PAYMDIVYPV SSVFALLSLH LFMYGCNLYM WKSTRINHNF IFEFSPSTAL KHRDAFLMCT TLMTTVFGAM VIHLLLRAGG FSPGQVDAIP GIIFLFFVGL
501: LICPFDIFYR PTRFCFIRVV RNIACSPFYK VLLVDFFMAD QLTSQIPLLR HLETTGCHIF ARVFKSHHPE ACHSGRLYIE IPYLISFLPY WWRAMQCARR
601: WFDDSDVNHL ANMGKYVSAM VAAGARVTYS RQDNHLWFAI VLITSVVATV YQLYWDFVKD WGFFNPKSKN PLLRDDLILK NKSIYYMSMA LNVVLRVAWV
701: ETIVHLKVGP VQTRLLDFLL ASLEVIRRGH WNFYRLENEH LNNVGRYRAV KAVPLPFRDI DSDS

Best Arabidopsis Sequence Match ( AT3G23430.1 )
(BLAST)

001: MVKFSKELEA QLIPEWKEAF VNYCLLKKQI KKIKTSRKPK PASHYPIGHH SDFGRSLFDP VRKLARTFSD KLFSNSEKPE ILQVRRRRGS SETGDDVDEI
101: YQTELVQLFS EEDEVKVFFA RLDEELNKVN QFHKPKETEF LERGEILKKQ LETLAELKQI LSDRKKRNLS GSNSHRSFSS SVRNSDFSAG SPGELSEIQS
201: ETSRTDEIIE ALERNGVSFI NSATRSKTKG GKPKMSLRVD IPDAVAGAEG GIARSIATAM SVLWEELVNN PRSDFTNWKN IQSAEKKIRS AFVELYRGLG
301: LLKTYSSLNM IAFTKIMKKF DKVAGQNASS TYLKVVKRSQ FISSDKVVRL MDEVESIFTK HFANNDRKKA MKFLKPHQTK DSHMVTFFVG LFTGCFISLF
401: VIYIILAHLS GIFTSSDQVS YLETVYPVFS VFALLSLHMF MYGCNLYMWK NTRINYTFIF EFAPNTALRY RDAFLMGTTF MTSVVAAMVI HLILRASGFS
501: ASQVDTIPGI LLLIFICVLI CPFNTFYRPT RFCFIRILRK IVCSPFYKVL MVDFFMGDQL TSQIPLLRHL ETTGCYFLAQ SFKTHEYNTC KNGRYYREFA
601: YLISFLPYFW RAMQCVRRWW DESNPDHLIN MGKYVSAMVA AGVRITYARE NNDLWLTMVL VSSVVATIYQ LYWDFVKDWG LLNPKSKNPW LRDNLVLRNK
701: NFYYLSIALN LVLRVAWIET IMRFRVSPVQ SHLLDFFLAS LEVIRRGHWN FYRVENEHLN NVGQFRAVKT VPLPFLDRDS DG

Arabidopsis Description

PHO1Phosphate transporter PHO1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S403]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.