CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, extracellular

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2
golgi 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10881
KRH20454
KRH21442
KRH50043

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23430.1	KRH10881	AT2G33770.1	22634761
AT3G23430.1	KRH20454	AT2G33770.1	22634761
AT3G23430.1	KRH21442	AT2G33770.1	22634761
AT3G23430.1	KRH50043	AT2G33770.1	22634761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72033	Soybean	cytosol, extracellular, golgi	66.67	62.4
CDX85098	Canola	cytosol, peroxisome, plasma membrane	58.97	12.23
KRH26830	Soybean	endoplasmic reticulum, golgi	23.93	12.17
CDY09011	Canola	cytosol, peroxisome, plasma membrane	61.54	12.04
KRH34432	Soybean	cytosol	76.92	11.63
KRG92358	Soybean	cytosol	73.5	11.11
TraesCS6D01G364200.1	Wheat	mitochondrion	44.44	10.66
KRH69098	Soybean	cytosol	69.23	10.62
KRH31683	Soybean	cytosol, nucleus, plasma membrane	67.52	10.34
Zm00001d051945_P001	Maize	peroxisome, plasma membrane, plastid	47.01	9.95
CDY18123	Canola	cytosol	61.54	9.44
Bra023727.1-P	Field mustard	cytosol	61.54	9.18
PGSC0003DMT400044207	Potato	cytosol, nucleus, plasma membrane	60.68	8.99
Solyc09g090360.2.1	Tomato	cytosol	59.83	8.88
AT3G23430.1	Thale cress	cytosol, nucleus, plasma membrane	58.97	8.82
Bra014948.1-P	Field mustard	cytosol	58.97	8.8
VIT_05s0049g01410.t01	Wine grape	cytosol	59.83	8.78
CDX77515	Canola	cytosol	58.97	8.5
GSMUA_Achr1P20470_001	Banana	nucleus	50.43	7.48
TraesCS6A01G379700.1	Wheat	cytosol	49.57	7.26
Zm00001d018445_P004	Maize	cytosol, nucleus, plasma membrane	49.57	7.2
TraesCS6B01G418600.1	Wheat	cytosol, nucleus, plasma membrane	48.72	7.14
GSMUA_Achr6P36590_001	Banana	cytosol	49.57	7.13
TraesCS6A01G380000.1	Wheat	cytosol	48.72	7.13
TraesCS6D01G364600.1	Wheat	plastid	48.72	7.12
TraesCS6D01G364100.1	Wheat	cytosol	47.86	7.09
TraesCS6D01G364300.1	Wheat	cytosol	47.01	7.05
HORVU6Hr1G089190.23	Barley	cytosol	48.72	7.05
HORVU6Hr1G089130.9	Barley	cytosol	48.72	7.05
EES07731	Sorghum	cytosol, nucleus, plasma membrane	48.72	7.02
Os02t0809800-01	Rice	cytosol	48.72	6.99
TraesCS6B01G418000.1	Wheat	cytosol	45.3	6.79
TraesCS6B01G418100.2	Wheat	cytosol, peroxisome, plasma membrane	47.01	6.75
KRH22527	Soybean	plasma membrane	24.79	6.16
KRH40514	Soybean	plasma membrane	21.37	5.95
KRH00677	Soybean	plasma membrane	21.37	5.95
KRH71113	Soybean	cytosol	38.46	5.7
KRH75548	Soybean	cytosol	38.46	5.69
KRH70782	Soybean	cytosol	30.77	4.79
KRG89566	Soybean	cytosol	31.62	4.65
KRG89568	Soybean	cytosol, peroxisome, plasma membrane	30.77	4.58
KRG89567	Soybean	cytosol, peroxisome, plasma membrane	29.06	4.27
KRH40050	Soybean	cytosol	27.35	4.22
KRH01215	Soybean	cytosol	27.35	4.12
KRG89558	Soybean	endoplasmic reticulum	26.5	3.87
KRH50561	Soybean	endoplasmic reticulum	26.5	3.86
KRH30768	Soybean	golgi, plasma membrane	6.84	3.67
CDY09013	Canola	nucleus	1.71	1.01
KRH26831	Soybean	plasma membrane	0.0	0.0

Protein Annotations

MapMan:35.1	EMBL:ACUP02010120	InterPro:EXS_C	EnsemblPlantsGene:GLYMA_16G116700	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005802	GO:GO:0005886	GO:GO:0016020
GO:GO:0016021	InterPro:IPR004342	UniProt:K7MGR3	EnsemblPlants:KRH07887	ProteinID:KRH07887	ProteinID:KRH07887.1
PFAM:PF03124	PFscan:PS51380	PANTHER:PTHR10783	PANTHER:PTHR10783:SF82	TMHMM:TMhelix	UniParc:UPI000295FB64

Description

hypothetical protein

Coordinates

chr16:+:26111259..26111743

Molecular Weight (calculated)

14129.6 Da

IEP (calculated)

9.581

GRAVY (calculated)

0.462

Length

117 amino acids

Sequence
(BLAST)

001: MEKYVSTMVA TRVRITYNRQ NDNIWFAIVL ITFVVATMYQ LDDLILKNKS IYYMSIVLNI VLRVTWVVTI MHFKVGPVQS RLQDFLLAVL EVIRRGHWNF
101: YRYILSYFEE MTEFFIL

Best Arabidopsis Sequence Match ( AT3G23430.1 )
(BLAST)

001: MVKFSKELEA QLIPEWKEAF VNYCLLKKQI KKIKTSRKPK PASHYPIGHH SDFGRSLFDP VRKLARTFSD KLFSNSEKPE ILQVRRRRGS SETGDDVDEI
101: YQTELVQLFS EEDEVKVFFA RLDEELNKVN QFHKPKETEF LERGEILKKQ LETLAELKQI LSDRKKRNLS GSNSHRSFSS SVRNSDFSAG SPGELSEIQS
201: ETSRTDEIIE ALERNGVSFI NSATRSKTKG GKPKMSLRVD IPDAVAGAEG GIARSIATAM SVLWEELVNN PRSDFTNWKN IQSAEKKIRS AFVELYRGLG
301: LLKTYSSLNM IAFTKIMKKF DKVAGQNASS TYLKVVKRSQ FISSDKVVRL MDEVESIFTK HFANNDRKKA MKFLKPHQTK DSHMVTFFVG LFTGCFISLF
401: VIYIILAHLS GIFTSSDQVS YLETVYPVFS VFALLSLHMF MYGCNLYMWK NTRINYTFIF EFAPNTALRY RDAFLMGTTF MTSVVAAMVI HLILRASGFS
501: ASQVDTIPGI LLLIFICVLI CPFNTFYRPT RFCFIRILRK IVCSPFYKVL MVDFFMGDQL TSQIPLLRHL ETTGCYFLAQ SFKTHEYNTC KNGRYYREFA
601: YLISFLPYFW RAMQCVRRWW DESNPDHLIN MGKYVSAMVA AGVRITYARE NNDLWLTMVL VSSVVATIYQ LYWDFVKDWG LLNPKSKNPW LRDNLVLRNK
701: NFYYLSIALN LVLRVAWIET IMRFRVSPVQ SHLLDFFLAS LEVIRRGHWN FYRVENEHLN NVGQFRAVKT VPLPFLDRDS DG

Arabidopsis Description

PHO1Phosphate transporter PHO1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S403]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.