Factsheet for VIT_12s0059g02490.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26830	Soybean	endoplasmic reticulum, golgi	40.68	83.48
Solyc04g080050.2.1	Tomato	golgi, peroxisome, plasma membrane, plastid	81.36	81.18
KRH22527	Soybean	plasma membrane	80.3	80.47
KRH30768	Soybean	golgi, plasma membrane	36.86	79.82
TraesCS5A01G062900.1	Wheat	plasma membrane	70.55	78.54
TraesCS5D01G074100.1	Wheat	plasma membrane	70.34	78.3
EES17313	Sorghum	plasma membrane	69.92	78.2
TraesCS5B01G070200.1	Wheat	plasma membrane	70.13	78.07
Os12t0595000-01	Rice	plasma membrane	69.7	77.96
PGSC0003DMT400071614	Potato	golgi, plasma membrane, plastid	44.28	76.28
GSMUA_Achr7P00360_001	Banana	plasma membrane	76.27	75.79
KRH26831	Soybean	plasma membrane	36.02	75.56
TraesCS7D01G365900.3	Wheat	plasma membrane	68.86	75.06
TraesCS7A01G356800.1	Wheat	plasma membrane	68.86	75.06
Solyc07g022830.2.1	Tomato	golgi, plasma membrane, plastid	73.09	74.84
TraesCS7B01G271100.2	Wheat	plasma membrane	68.64	74.83
GSMUA_Achr4P23610_001	Banana	plasma membrane	75.42	74.63
OQU79488	Sorghum	golgi, plasma membrane	33.9	73.39
Zm00001d030939_P004	Maize	plasma membrane	69.49	72.25
PGSC0003DMT400080869	Potato	golgi, peroxisome, plasma membrane	69.07	72.12
Zm00001d041383_P002	Maize	plasma membrane	69.28	72.03
HORVU5Hr1G016790.15	Barley	peroxisome, plastid	70.13	65.94
Bra022884.1-P	Field mustard	plasma membrane	61.65	64.52
AT2G32295.2	Thale cress	plasma membrane	63.14	64.36
CDX84739	Canola	plasma membrane, plastid	62.71	63.79
CDY65458	Canola	plasma membrane, plastid	62.29	63.23
CDX84740	Canola	plasma membrane	38.77	59.03
CDX98567	Canola	golgi, nucleus, plasma membrane	25.42	58.82
CDY71691	Canola	endoplasmic reticulum, extracellular, plasma membrane	16.31	56.62
CDY58360	Canola	endoplasmic reticulum, plasma membrane	16.74	54.48
CDX76897	Canola	mitochondrion	12.29	48.33
CDX81844	Canola	cytosol	15.89	41.67
CDX82438	Canola	cytosol	16.1	37.62
Bra012265.1-P	Field mustard	cytosol	16.31	36.15
CDY22918	Canola	cytosol	17.16	34.91
VIT_00s0186g00110.t01	Wine grape	extracellular, golgi	8.26	29.32
VIT_14s0108g01130.t01	Wine grape	nucleus, peroxisome, plasma membrane	25.21	18.59
VIT_01s0182g00130.t01	Wine grape	cytosol	26.91	16.3
VIT_01s0182g00140.t01	Wine grape	cytosol, nucleus, plasma membrane	27.12	16.06
VIT_00s1333g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.85	15.37
VIT_01s0011g02520.t01	Wine grape	cytosol	25.64	15.32
VIT_01s0182g00150.t01	Wine grape	cytosol	26.06	15.13
VIT_01s0182g00060.t01	Wine grape	cytosol	25.0	14.88
VIT_05s0049g01410.t01	Wine grape	cytosol	24.79	14.68

Protein Annotations

EntrezGene:100256838	wikigene:100256838	MapMan:35.1	ProteinID:CBI28965	ProteinID:CBI28965.3	UniProt:D7TEP2
InterPro:EXS_C	EMBL:FN595765	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0016020	GO:GO:0016021	InterPro:IPR004342	EntrezGene:LOC100256838	wikigene:LOC100256838
PFAM:PF03124	PFscan:PS51380	PANTHER:PTHR10783	PANTHER:PTHR10783:SF46	TMHMM:TMhelix	UniParc:UPI00015CA38A
ArrayExpress:VIT_12s0059g02490	EnsemblPlantsGene:VIT_12s0059g02490	EnsemblPlants:VIT_12s0059g02490.t01	RefSeq:XP_002274355	RefSeq:XP_002274355.2	SEG:seg

Description

No Description!

Coordinates

chr12:-:7271486..7286361

Molecular Weight (calculated)

54734.6 Da

IEP (calculated)

8.884

GRAVY (calculated)

0.288

Length

472 amino acids

Sequence
(BLAST)

001: MFGAVANVPT NSPHLRKSGS RPVFSDPGSG ELGSGAEEGF LHSVEVDEMK GASAPLSTAA IMPSPIFLWR FKVLLFFIWG FSCCKIGWDS VMRMSVDLRD
101: LFLYEAFLYY NPLLLVTMMV WLWGVNLWIF AQSSVNYAKI FDLDQSHLTQ REIWKCATWM TIIVPTSMTA YLYLYSHGEV SLAASQPVLL YTAIALVLIF
201: PFDIFYLSSR YFLLKTLWRI VLPLQAITFS DFFLADILTS MAKVFSDLER SVCRMLHRQV ATIAWFEADS VCGSHSVAIP LVLVLPYLFR FFQCLRQYKD
301: TGEKTTLLNA LKYSTAVPVI FLSALKYHVF PDRWTSIYRP LWLLSSVLNS LYSFYWDVTR DWDLSAFTRI FKFSKASLLS NLLYGRRWVY FWVIGSNLVL
401: RCTWTYKLSA HLRHNYLTVF TITALEIFRR FQWVFFRVEN EWNKMNSKSN IQLSMSDTSE EDKLLGSNER NV

Best Arabidopsis Sequence Match ( AT5G35730.1 )
(BLAST)

001: MFENPASNSP HLRKSSSKSV FIDPGLNGHL GEMGDLKGSN SPLHITTMVP SPIFLWRFKV VLFLFWALCC CKIGWDSVMR MSIDLRDLFL YEAFLYYNPL
101: LLVTMMVWLW GVNLWVFSQG SVNYSKVFDL DHNHLTHREM WKCSMWMTII VPTSMTAYLY LYSHGEVSLA ASQPVLLYIA FALVLIFPFD IFYLSSRYFL
201: LRTLWRIAFP LQPITFPDFF LADILTSMVK VFSDLERSVC RMVHRQVATI AWFEADAVCG SHQIAIPLVL VFPYICRLLQ CLRQYKDTKE KSSLLNALKY
301: STAVPVIFLS ALKYHVMPES WTSFYRPLWL FSSVINSLYS FYWDVTRDWD LSGFTKIFKF SRPSTISNLL YGRQWVYFWV IGSNLVLRCA WTYKLSAHLR
401: HNYITVFTMT AMEMLRRFQW VFFRVENEWN KITKSHPMGE ISLEEDKLLG STTPHDV

Arabidopsis Description

EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:Q8VYS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.