Factsheet for Solyc04g080050.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plastid, plasma membrane

Predictor Summary:

plastid 3
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane, plastid
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071614	Potato	golgi, plasma membrane, plastid	55.18	95.26
KRH26830	Soybean	endoplasmic reticulum, golgi	39.75	81.74
VIT_12s0059g02490.t01	Wine grape	plastid	81.18	81.36
KRH30768	Soybean	golgi, plasma membrane	35.94	77.98
KRH22527	Soybean	plasma membrane	77.17	77.49
TraesCS5A01G062900.1	Wheat	plasma membrane	69.34	77.36
Solyc07g022830.2.1	Tomato	golgi, plasma membrane, plastid	75.26	77.22
TraesCS5D01G074100.1	Wheat	plasma membrane	69.13	77.12
TraesCS5B01G070200.1	Wheat	plasma membrane	68.92	76.89
EES17313	Sorghum	plasma membrane	68.5	76.78
Os12t0595000-01	Rice	plasma membrane	68.08	76.3
KRH26831	Soybean	plasma membrane	35.52	74.67
TraesCS7A01G356800.1	Wheat	plasma membrane	67.65	73.9
TraesCS7B01G271100.2	Wheat	plasma membrane	67.44	73.67
TraesCS7D01G365900.3	Wheat	plasma membrane	67.23	73.44
Zm00001d041383_P002	Maize	plasma membrane	68.92	71.81
GSMUA_Achr7P00360_001	Banana	plasma membrane	72.09	71.79
Zm00001d030939_P004	Maize	plasma membrane	68.08	70.93
OQU79488	Sorghum	golgi, plasma membrane	32.35	70.18
GSMUA_Achr4P23610_001	Banana	plasma membrane	70.19	69.6
HORVU5Hr1G016790.15	Barley	peroxisome, plastid	69.77	65.74
Bra022884.1-P	Field mustard	plasma membrane	60.25	63.19
CDX84739	Canola	plasma membrane, plastid	61.31	62.5
AT2G32295.2	Thale cress	plasma membrane	61.1	62.42
CDY65458	Canola	plasma membrane, plastid	60.68	61.72
CDX84740	Canola	plasma membrane	38.05	58.06
CDX98567	Canola	golgi, nucleus, plasma membrane	24.31	56.37
CDY71691	Canola	endoplasmic reticulum, extracellular, plasma membrane	16.07	55.88
CDY58360	Canola	endoplasmic reticulum, plasma membrane	16.49	53.79
CDX76897	Canola	mitochondrion	12.26	48.33
CDX81844	Canola	cytosol	15.64	41.11
CDX82438	Canola	cytosol	15.86	37.13
Bra012265.1-P	Field mustard	cytosol	15.64	34.74
CDY22918	Canola	cytosol	16.49	33.62
Solyc02g088240.2.1	Tomato	mitochondrion, plasma membrane	19.66	26.72
Solyc05g010060.2.1	Tomato	cytosol	25.58	15.39
Solyc02g088220.2.1	Tomato	cytosol	25.16	15.32
Solyc05g013180.2.1	Tomato	cytosol	24.31	14.82
Solyc02g088230.2.1	Tomato	cytosol	24.74	14.77
Solyc09g090360.2.1	Tomato	cytosol	24.31	14.59
Solyc08g068240.1.1	Tomato	cytosol	22.83	13.76
Solyc02g088250.2.1	Tomato	cytosol	4.86	5.56

Protein Annotations

EnsemblPlants:Solyc04g080050.2.1	EnsemblPlantsGene:Solyc04g080050.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0016020	GO:GO:0016021	InterPro:EXS_C	InterPro:IPR004342	PANTHER:PTHR10783	PANTHER:PTHR10783:SF46
PFAM:PF03124	PFscan:PS51380	TMHMM:TMhelix	UniParc:UPI0002765656	UniProt:K4BV84	MapMan:35.1

Description

No Description!

Coordinates

chr4:-:64339089..64352147

Molecular Weight (calculated)

55182.4 Da

IEP (calculated)

9.148

GRAVY (calculated)

0.288

Length

473 amino acids

Sequence
(BLAST)

001: MFGSLVDAPV NSPHLRRSGS RAVVSDIGTV ELGGSPVEAL LHSIEVNEMK GVTAPLSTAA IMPSPVLLWR FKVLLFLIWG VSCCKISWDS VMRMSANLRD
101: LFLYEAFLYY NPLLLMTMMV WFWGINLWVF AQANVNYSKI FDLDQNHLSH REIWKCATWM TMIVPTSMTA YLYLYSHGEV SLAASQPVLL YAAFAMALIF
201: PFDIFYLSSR YFFLRTVWRI VFPFQAISFP DFFLADIFTS MSKVFSDLER SVCRMVHRQV ATIAWFEADS VCGSHAVAIP IVLVLPYLFR LFQCLRQYKD
301: TKEKTTLLNA LKYSTAVPVI FLSALKYHVF PDNWVNIYRP LWLLSGVVNS LYSFYWDLTR DWDLSCFTRI FKFSRPNALS YLLYGRKWVY FWVIGTNLIL
401: RCTWTYKLSS HLRHNYLTVF AITALEIFRR FQWAFFRVEN EWNKMNSKQN IQLSTIDKPN DEQKLLDPNG YSV

Best Arabidopsis Sequence Match ( AT5G35730.1 )
(BLAST)

001: MFENPASNSP HLRKSSSKSV FIDPGLNGHL GEMGDLKGSN SPLHITTMVP SPIFLWRFKV VLFLFWALCC CKIGWDSVMR MSIDLRDLFL YEAFLYYNPL
101: LLVTMMVWLW GVNLWVFSQG SVNYSKVFDL DHNHLTHREM WKCSMWMTII VPTSMTAYLY LYSHGEVSLA ASQPVLLYIA FALVLIFPFD IFYLSSRYFL
201: LRTLWRIAFP LQPITFPDFF LADILTSMVK VFSDLERSVC RMVHRQVATI AWFEADAVCG SHQIAIPLVL VFPYICRLLQ CLRQYKDTKE KSSLLNALKY
301: STAVPVIFLS ALKYHVMPES WTSFYRPLWL FSSVINSLYS FYWDVTRDWD LSGFTKIFKF SRPSTISNLL YGRQWVYFWV IGSNLVLRCA WTYKLSAHLR
401: HNYITVFTMT AMEMLRRFQW VFFRVENEWN KITKSHPMGE ISLEEDKLLG STTPHDV

Arabidopsis Description

EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:Q8VYS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.