Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- golgi 3
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003629 | Potato | cytosol | 95.11 | 43.21 |
| Solyc02g088220.2.1 | Tomato | cytosol | 88.22 | 39.51 |
| VIT_14s0108g01130.t01 | Wine grape | nucleus, peroxisome, plasma membrane | 69.25 | 37.66 |
| Solyc02g088230.2.1 | Tomato | cytosol | 82.47 | 36.24 |
| CDY04052 | Canola | nucleus | 62.36 | 33.44 |
| KRH40050 | Soybean | cytosol | 67.24 | 30.83 |
| KRH01215 | Soybean | cytosol | 66.95 | 30.03 |
| CDY44412 | Canola | cytosol, nucleus, plasma membrane | 62.93 | 27.83 |
| Bra033080.1-P | Field mustard | cytosol, nucleus, plasma membrane | 62.64 | 27.7 |
| AT3G29060.1 | Thale cress | cytosol, nucleus, plasma membrane | 62.07 | 27.0 |
| CDY00103 | Canola | nucleus, peroxisome, plasma membrane | 61.21 | 26.69 |
| Bra036222.1-P | Field mustard | cytosol, nucleus, plasma membrane | 60.92 | 26.67 |
| CDY19999 | Canola | cytosol, nucleus, plasma membrane | 60.92 | 26.57 |
| Solyc05g013180.2.1 | Tomato | cytosol | 56.61 | 25.39 |
| Solyc08g068240.1.1 | Tomato | cytosol | 53.45 | 23.69 |
| Solyc07g022830.2.1 | Tomato | golgi, plasma membrane, plastid | 26.72 | 20.17 |
| Solyc04g080050.2.1 | Tomato | golgi, peroxisome, plasma membrane, plastid | 26.72 | 19.66 |
| Solyc09g090360.2.1 | Tomato | cytosol | 38.51 | 17.01 |
| Solyc05g010060.2.1 | Tomato | cytosol | 37.93 | 16.79 |
| Solyc02g088250.2.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc02g088240.2.1 | EnsemblPlantsGene:Solyc02g088240.2 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005802 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | InterPro:EXS_C |
| InterPro:IPR004342 | PANTHER:PTHR10783 | PANTHER:PTHR10783:SF56 | PFAM:PF03124 | PFscan:PS51380 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00027684DE | UniProt:K4BBY0 | MapMan:24.2.7.4 | MapMan:25.3.2.2 | : |
Description
No Description!
Coordinates
chr2:-:50399641..50401823
Molecular Weight (calculated)
40715.4 Da
IEP (calculated)
9.792
GRAVY (calculated)
0.334
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMYAGNVYY WKRFRVNYPF IFGFKQGTAL GYRQVLLLAS GLSLLALSAA LSHLDMDMDP KTQKFETLTE LIPLALVIVL LLIIFCPLNI IYRSSRFFLL
101: RTAWHCLCAP LYKVTLPDFI LADQLTSQVQ AIRSLQFYVC YYVWGNFRTR SNECLKSNVY QILYIVVAII PFWSRFIQCL RRLFEERDSM QGLNSLKYFS
201: TIVALVMRTL YSQKGGTFWR VMAASTSGVT TVANTYWDLV IDWGLLQRNS KNPWLRDKLL VPHKIVYFVA IVLDIILRLV WMQLVLDIKQ LSFLHEKAFL
301: AVVACLEILR RGIWNFFRLE NEHLNNVGKY RAFKSVPLPF NYDEDKSH
101: RTAWHCLCAP LYKVTLPDFI LADQLTSQVQ AIRSLQFYVC YYVWGNFRTR SNECLKSNVY QILYIVVAII PFWSRFIQCL RRLFEERDSM QGLNSLKYFS
201: TIVALVMRTL YSQKGGTFWR VMAASTSGVT TVANTYWDLV IDWGLLQRNS KNPWLRDKLL VPHKIVYFVA IVLDIILRLV WMQLVLDIKQ LSFLHEKAFL
301: AVVACLEILR RGIWNFFRLE NEHLNNVGKY RAFKSVPLPF NYDEDKSH
001: MKFGREFETQ MIQEWKEAYM DYRSLKSIVK QILRYRLQKQ QRPPPPPPPP STGDTVPLKT DGGEGGGGGG GGGPGLSRRI SLYRAFSGLT NRASRSPKKS
101: HKHHNPLSSK RHHHHHNHHH YHLFDDDEEQ IILINEDETA SYTTTFLNSA EEGGEMEVQF FRRLDGEFNK VLRFYKQKVE NVMEEADELS RQLNVLIALR
201: VKVENPHVHL PPDLNSVASA PSSPHSTMRT PAPSPMDVIR EMEKTEDKKV FKPAPVEMLD HVKLKIDPET PLLTLKMMIL GLPSEQTFSK PELRRAEELM
301: NRAFVEFYQK LRFLKSYCFL NQLAFAKILK KYDKTTSRNA SKPYLNTVDH SYLGSCDEVS RLMSRVEATF IKHFANGNHR EGMKCLRPKT KREKHRITYF
401: LGFFSGCAVA LAIAITVLVH IRGLTKSEGR HQYMENIFPL YSLFGFVAVH LFMYAADIYF WSRYRVNYPF IFGFEQGNDL GYREVLLVGS GLAVLTFGGV
501: ISNLDMEMDP RTKSFSVITE LVPLALLVCL MMVLFCPFNI IYRSSRYFFV GSVFRCLLSP LYKVILPDFF LADQLTSQVQ TFRSLLFYVC YYGWGGDFKR
601: RTHTCYDSEI YKELYLVVAI IPYWFRFAQS IRRLVEEKDK MHGLNALKYL STILAVAART IFEMKRGTYW LTVAVTTSSI ATLFNTYWDI FRDWGLMNRN
701: SKNPWLRDKL LVPYKSIYFI VMVANVVLRL AWMQTVLGIK EAPFLHKRAL VAVVASLEIV RRGIWNFFRL ENEHLNNVGK YRAFKSVPLP FQELGGSKSV
101: HKHHNPLSSK RHHHHHNHHH YHLFDDDEEQ IILINEDETA SYTTTFLNSA EEGGEMEVQF FRRLDGEFNK VLRFYKQKVE NVMEEADELS RQLNVLIALR
201: VKVENPHVHL PPDLNSVASA PSSPHSTMRT PAPSPMDVIR EMEKTEDKKV FKPAPVEMLD HVKLKIDPET PLLTLKMMIL GLPSEQTFSK PELRRAEELM
301: NRAFVEFYQK LRFLKSYCFL NQLAFAKILK KYDKTTSRNA SKPYLNTVDH SYLGSCDEVS RLMSRVEATF IKHFANGNHR EGMKCLRPKT KREKHRITYF
401: LGFFSGCAVA LAIAITVLVH IRGLTKSEGR HQYMENIFPL YSLFGFVAVH LFMYAADIYF WSRYRVNYPF IFGFEQGNDL GYREVLLVGS GLAVLTFGGV
501: ISNLDMEMDP RTKSFSVITE LVPLALLVCL MMVLFCPFNI IYRSSRYFFV GSVFRCLLSP LYKVILPDFF LADQLTSQVQ TFRSLLFYVC YYGWGGDFKR
601: RTHTCYDSEI YKELYLVVAI IPYWFRFAQS IRRLVEEKDK MHGLNALKYL STILAVAART IFEMKRGTYW LTVAVTTSSI ATLFNTYWDI FRDWGLMNRN
701: SKNPWLRDKL LVPYKSIYFI VMVANVVLRL AWMQTVLGIK EAPFLHKRAL VAVVASLEIV RRGIWNFFRL ENEHLNNVGK YRAFKSVPLP FQELGGSKSV
Arabidopsis Description
PHO1-H9Phosphate transporter PHO1 homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJW0]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.