Factsheet for PGSC0003DMT400003629

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g088240.2.1	Tomato	mitochondrion, plasma membrane	43.21	95.11
Solyc02g088250.2.1	Tomato	cytosol	49.74	92.03
VIT_14s0108g01130.t01	Wine grape	nucleus, peroxisome, plasma membrane	53.39	63.91
KRH40050	Soybean	cytosol	61.1	61.66
KRH01215	Soybean	cytosol	61.1	60.31
CDY04052	Canola	nucleus	49.48	58.4
CDY44412	Canola	cytosol, nucleus, plasma membrane	55.61	54.13
Bra033080.1-P	Field mustard	cytosol, nucleus, plasma membrane	55.35	53.88
AT3G29060.1	Thale cress	cytosol, nucleus, plasma membrane	55.22	52.88
Bra036222.1-P	Field mustard	cytosol, nucleus, plasma membrane	54.57	52.58
CDY19999	Canola	cytosol, nucleus, plasma membrane	54.57	52.38
CDY00103	Canola	nucleus, peroxisome, plasma membrane	54.44	52.26
PGSC0003DMT400073008	Potato	cytosol	50.65	49.74
PGSC0003DMT400091701	Potato	cytosol	43.08	45.08
PGSC0003DMT400044207	Potato	cytosol, nucleus, plasma membrane	31.33	30.38
PGSC0003DMT400064691	Potato	cytosol, nucleus, plasma membrane	24.67	28.34
PGSC0003DMT400080869	Potato	golgi, peroxisome, plasma membrane	13.71	23.23
PGSC0003DMT400071614	Potato	golgi, plasma membrane, plastid	7.96	22.26

Protein Annotations

MapMan:24.2.7.4	MapMan:25.3.2.2	ncoils:Coil	InterPro:EXS_C	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR004331	InterPro:IPR004342	UniProt:M0ZM12	PFAM:PF03105	PFAM:PF03124
EnsemblPlantsGene:PGSC0003DMG400001430	PGSC:PGSC0003DMG400001430	EnsemblPlants:PGSC0003DMT400003629	InterPro:PHO1_SPX	PFscan:PS51380	PFscan:PS51382
PANTHER:PTHR10783	PANTHER:PTHR10783:SF56	InterPro:SPX_dom	TMHMM:TMhelix	UniParc:UPI0002963010	SEG:seg

Description

SPX, N-terminal; EXS, C-terminal [Source:PGSC_GENE;Acc:PGSC0003DMG400001430]

Coordinates

chr2:+:45999348..46003399

Molecular Weight (calculated)

88485.2 Da

IEP (calculated)

9.771

GRAVY (calculated)

-0.085

Length

766 amino acids

Sequence
(BLAST)

001: MVHEWQEAYM DYNYLKNLLK DLLDFKKKNA PLSEVAATPE GSLKRRISMY RAFSGLQSRY TSFKGSSGNN NNNNHEDEVI LVNTVQQEGS QGHHQTMFLM
101: SSEEGGEYEM IFFKRLDDEF NKVSTFYKKK VGQVKAEADE LSKQMDALIA LRIMVEKPSI EMHSAQGMDP ASVVPLHLRS QLRSHMEVIQ EVEMSSEEIV
201: EDESTSGKRD TTKMNPMGFR PAPVGILDNV KINIEPATPI STLKNVIKSS KSDLSFSRQE LRKAEEQIRM AFVEFYQKLR LLKNYSFLNV LAFSKIMKKY
301: DKITSRKASK SYLEMIDKSY LGSSDEVAKL VERVEVTFIK HFVNGNRRKG MKSLRPQAKR DTHRVTFFMG MFSGCSIALV AAIAVVIRAG NLLEHKDRGQ
401: YMDNIFPLYS LFGYIVLHML MYAGNVYYWK RFRVNYPFIF GFKQGTALGY RQVLLLASGL SLLALAAAFS HLDMDMDPKT RKFETLTELI PLTLVIVLII
501: IIFCPLNIIY RSSRFFLLRT AWHCLCAPLY KVTLPDFILA DQLTSQVQAI RSLQFYVCYY VWGNFKTRSN KCQDSSVYKI LYIVVAIIPF WSRFIQCLRR
601: LFEEKDSMQG LNGLKYFSTI VALVMKTLYS QKGGTFWRVM AASTSGVTTV ANTYWDLVID WGLLQRNSKN PWLRDKLLVP HKIVYFVAIV LDIILRLVWM
701: QLVLDIKELS FLHEKAFLAV VACLEILRRG IWNFFRLENE HLNNVGKYRA FKSVPLPFNY DEDKSQ

Best Arabidopsis Sequence Match ( AT1G14040.1 )
(BLAST)

001: MKFGKEFSSQ MVPEWQQAYM DYDFLKTLLK EIITFKRRTN NAPSHGGAKT GGGLNRKLTL YRAFSGLVST PRHKRSNSSH DVEEGVQLTG SMRSGPILVN
101: TTASHGYETT FLMAAEEGGE YELVFFRRLD DEFNKVDKFY RKKVEEVLKE AAMLNKQMDA LIAFRVKVEN PDGWRWEERT VEMTRLASDI ATSAAALSAS
201: TPAGAKSMKV RSQEHMEAIQ EGGSSRAGLM EDDEEDEDEQ NETSVVSTGA IDNETTTSRM RGARPSPIDV LGRVKINNTK ETPRSTIKGV LKVSKQTDLK
301: FSRENLMKVE ESLKRAFIEF YQKLRLLKSY SFLNVLAFSK ILKKYDKITS RDATKPYMKV VDSSYLGSSD EVMRLMERVE ATFIKHFANA NRAKAMNILR
401: PKAKRERHRI TFSTGFSAGC VFSLIVALVA IIRTRNLLEM EGQKEYMNTM FPLYSLFGFI VLHIIVYAAN IYYWRRYRVN YSFIFGFKQG TELGYRQVLL
501: VGFSIGVLAL LCVLANLDME ADPKTKAYQA RTEILPLILL AAMFIVLVLP FNYFYRSSRF FFLTCLFHCL AAPLYKVTLP DFFLGDQLTS QVQAIRSIEF
601: YICYYGWGDF RHRKSTCKES DVYNTFFFIV AVIPYVSRLL QCLRRLFEEK NPEQGYNGLK YFLTIVAVCL RTAYSIQKGQ VAWRVLAAVF SFIAAIFCTY
701: WDFVHDWGLL NRTSKNRWLR DKLLVPQKKV YFIAMVLNVL LRFAWIQTVL DFNFSFMHRQ TMVAIVASLE IIRRGIWNFF RLENEHLNNV GKYRAFKSVP
801: LPFNYDEDDD KDN

Arabidopsis Description

PHO1;H3Phosphate transporter PHO1 homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.