Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71691 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.04 | 72.06 |
| CDY58360 | Canola | endoplasmic reticulum, plasma membrane | 49.02 | 68.97 |
| CDX76897 | Canola | mitochondrion | 37.25 | 63.33 |
| CDX82438 | Canola | cytosol | 46.08 | 46.53 |
| KRH26831 | Soybean | plasma membrane | 49.51 | 44.89 |
| CDX81844 | Canola | cytosol | 39.22 | 44.44 |
| CDY22918 | Canola | cytosol | 47.06 | 41.38 |
| PGSC0003DMT400071614 | Potato | golgi, plasma membrane, plastid | 51.96 | 38.69 |
| CDX84739 | Canola | plasma membrane, plastid | 85.29 | 37.5 |
| CDY65458 | Canola | plasma membrane, plastid | 85.29 | 37.42 |
| AT2G32295.2 | Thale cress | plasma membrane | 74.51 | 32.83 |
| VIT_12s0059g02490.t01 | Wine grape | plastid | 58.82 | 25.42 |
| CDX74638 | Canola | golgi, plasma membrane, plastid | 56.37 | 25.22 |
| CDY33680 | Canola | golgi, plasma membrane, plastid | 55.88 | 24.73 |
| Solyc04g080050.2.1 | Tomato | golgi, peroxisome, plasma membrane, plastid | 56.37 | 24.31 |
| KRH22527 | Soybean | plasma membrane | 55.39 | 23.99 |
| Solyc07g022830.2.1 | Tomato | golgi, plasma membrane, plastid | 50.98 | 22.56 |
| GSMUA_Achr7P00360_001 | Banana | plasma membrane | 52.45 | 22.53 |
| Os12t0595000-01 | Rice | plasma membrane | 46.08 | 22.27 |
| TraesCS5A01G062900.1 | Wheat | plasma membrane | 46.08 | 22.17 |
| TraesCS5D01G074100.1 | Wheat | plasma membrane | 46.08 | 22.17 |
| TraesCS5B01G070200.1 | Wheat | plasma membrane | 45.59 | 21.93 |
| EES17313 | Sorghum | plasma membrane | 45.1 | 21.8 |
| GSMUA_Achr4P23610_001 | Banana | plasma membrane | 50.49 | 21.59 |
| TraesCS7B01G271100.2 | Wheat | plasma membrane | 45.59 | 21.48 |
| TraesCS7A01G356800.1 | Wheat | plasma membrane | 45.1 | 21.25 |
| TraesCS7D01G365900.3 | Wheat | plasma membrane | 45.1 | 21.25 |
| Zm00001d030939_P004 | Maize | plasma membrane | 46.08 | 20.7 |
| Zm00001d041383_P002 | Maize | plasma membrane | 45.1 | 20.26 |
| HORVU5Hr1G016790.15 | Barley | peroxisome, plastid | 48.53 | 19.72 |
| PGSC0003DMT400080869 | Potato | golgi, peroxisome, plasma membrane | 41.18 | 18.58 |
| KRH30768 | Soybean | golgi, plasma membrane | 12.25 | 11.47 |
| CDX84740 | Canola | plasma membrane | 15.69 | 10.32 |
| CDX85098 | Canola | cytosol, peroxisome, plasma membrane | 21.57 | 7.8 |
| CDY39346 | Canola | plasma membrane | 15.2 | 7.62 |
| CDY72508 | Canola | golgi, peroxisome | 14.22 | 6.5 |
| KRH26830 | Soybean | endoplasmic reticulum, golgi | 6.86 | 6.09 |
| CDY09011 | Canola | cytosol, peroxisome, plasma membrane | 17.65 | 6.02 |
| CDY18123 | Canola | cytosol | 21.57 | 5.77 |
| CDX77515 | Canola | cytosol | 22.06 | 5.54 |
| CDY56003 | Canola | plasma membrane | 15.69 | 5.43 |
| CDY65467 | Canola | cytosol | 20.1 | 5.31 |
| CDY64495 | Canola | cytosol | 19.61 | 5.11 |
| CDX92696 | Canola | cytosol, peroxisome, plasma membrane | 18.14 | 5.1 |
| CDY04052 | Canola | nucleus | 16.18 | 5.08 |
| CDY52351 | Canola | cytosol, peroxisome, plasma membrane | 17.65 | 5.01 |
| CDY58396 | Canola | cytosol | 18.14 | 5.01 |
| CDY33783 | Canola | cytosol, peroxisome, plasma membrane | 13.73 | 5.01 |
| CDY16184 | Canola | cytosol | 18.14 | 5.0 |
| CDX82870 | Canola | cytosol | 18.14 | 4.95 |
| CDY46445 | Canola | cytosol | 18.14 | 4.95 |
| CDY08975 | Canola | cytosol, peroxisome, plasma membrane | 17.65 | 4.93 |
| CDY54499 | Canola | cytosol | 18.14 | 4.81 |
| CDX95992 | Canola | cytosol | 18.14 | 4.81 |
| CDY38614 | Canola | cytosol | 18.14 | 4.81 |
| CDY07366 | Canola | cytosol | 18.63 | 4.76 |
| CDY45171 | Canola | cytosol, peroxisome, plasma membrane | 14.71 | 4.72 |
| CDY04251 | Canola | endoplasmic reticulum, mitochondrion | 1.96 | 4.71 |
| CDY44412 | Canola | cytosol, nucleus, plasma membrane | 18.14 | 4.7 |
| CDX81539 | Canola | cytosol | 17.65 | 4.68 |
| CDY04252 | Canola | cytosol | 17.65 | 4.67 |
| CDY19999 | Canola | cytosol, nucleus, plasma membrane | 18.14 | 4.64 |
| CDY16128 | Canola | cytosol | 17.65 | 4.62 |
| OQU79488 | Sorghum | golgi, plasma membrane | 4.9 | 4.59 |
| CDY04142 | Canola | cytosol, nucleus, plasma membrane | 18.14 | 4.58 |
| CDX98143 | Canola | cytosol | 17.65 | 4.53 |
| CDY00103 | Canola | nucleus, peroxisome, plasma membrane | 17.65 | 4.51 |
| CDY45175 | Canola | cytosol, nucleus, plasma membrane | 17.16 | 4.51 |
| CDY03011 | Canola | cytosol, nucleus, plasma membrane | 17.16 | 4.49 |
| CDY03008 | Canola | cytosol, peroxisome, plasma membrane | 16.67 | 4.47 |
| CDX95933 | Canola | cytosol | 17.16 | 4.46 |
| CDY03007 | Canola | cytosol | 17.16 | 4.39 |
| CDY36429 | Canola | cytosol, peroxisome, plasma membrane | 17.65 | 4.36 |
| CDY04143 | Canola | cytosol | 17.16 | 4.34 |
| CDY56000 | Canola | cytosol | 15.69 | 4.31 |
| CDY45174 | Canola | cytosol, peroxisome, plasma membrane | 16.67 | 4.25 |
| CDY33781 | Canola | cytosol | 15.69 | 4.23 |
| CDY40927 | Canola | cytosol | 16.18 | 4.21 |
| CDY16129 | Canola | cytosol | 15.69 | 4.2 |
| CDY09013 | Canola | nucleus | 3.92 | 4.04 |
| CDY37178 | Canola | cytosol | 16.18 | 4.04 |
| CDY09339 | Canola | cytosol | 16.18 | 4.04 |
| CDY71475 | Canola | extracellular, golgi, plasma membrane | 4.41 | 3.33 |
| CDY36431 | Canola | cytosol | 3.43 | 3.2 |
| CDY56002 | Canola | cytosol | 4.9 | 3.06 |
| CDY45173 | Canola | cytosol, golgi, peroxisome | 2.45 | 2.81 |
| CDY60937 | Canola | cytosol, nucleus, plasma membrane | 17.65 | 2.14 |
| CDY52794 | Canola | nucleus | 1.96 | 1.41 |
| CDY44990 | Canola | extracellular, golgi | 0.49 | 1.3 |
Protein Annotations
| EnsemblPlants:CDX98567 | EnsemblPlantsGene:GSBRNA2T00106233001 | GO:A0A078EC44 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:EXS_C | InterPro:IPR004342 | PANTHER:PTHR10783 | PANTHER:PTHR10783:SF46 | PFAM:PF03124 | ProteinID:CDX98567 |
| ProteinID:CDX98567.1 | TMHMM:TMhelix | UniParc:UPI0004EE9C93 | MapMan:35.2 | : | : |
Description
BnaC05g38080D
Coordinates
chrLK031905:+:1175531..1178116
Molecular Weight (calculated)
23369.6 Da
IEP (calculated)
9.463
GRAVY (calculated)
0.206
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGGVFSVPV NNPHLRKSGS RLIIANLGEN DLKNSSMQLG CSIGWESVMK MGQDTRELFF YETFLYYNPL LLITMMVWFW GVNLWVFSRT GVDYAAIFYL
101: GPDHLSHKEI WKCARWMTTI ILTSMTAYLY LYSHGDVSLA ASQPIVLYLS AVIILIIPFD IFYKVGLRLN PTARLAPSAF PNRGSSRSHE LQCYKWKLRN
201: VSMS
101: GPDHLSHKEI WKCARWMTTI ILTSMTAYLY LYSHGDVSLA ASQPIVLYLS AVIILIIPFD IFYKVGLRLN PTARLAPSAF PNRGSSRSHE LQCYKWKLRN
201: VSMS
001: MFGGVLSMPV NNPHLRKSGS RHIVTNLGDN DLKTASMLLS TYAKLQTPIF LRSLKVALYI GGLYVCGKVG LESVMKMGVE TRELFFYETF LYYNPLLLIT
101: LMVWLWGVNL WVFSRSGVDY AAIFYLGSDH LSHREIWKCA RWMTIIILTS MTAYLYLYSH GDVKLAASQP VVLYFSAVII LIIPFNIFYM SSRYYLLWTF
201: WRILFPVHAV TFSDFFLADI LTSMSKVLSD LERSVCRMVH RQVATVAWFE ADSVCGSHSA AIPLVLVLPY LFRLFQCIRQ YKDSKDIANI YNAGKYLTAV
301: PVIFLSALKY YIDPDTWTYS IQPAWILSGL ANTFFSFFWD ILRDWDLSVF TRIFKFTRPN LFSHLLYGRR WVYVWVIGSN LVLRWTWTYK LSAHLRNNYI
401: TVFIITALEI YRRFQWAFFR IENVWYKINN PKHTAHQSNP LSLQHDIDSE HEKLLAHSHS PGV
101: LMVWLWGVNL WVFSRSGVDY AAIFYLGSDH LSHREIWKCA RWMTIIILTS MTAYLYLYSH GDVKLAASQP VVLYFSAVII LIIPFNIFYM SSRYYLLWTF
201: WRILFPVHAV TFSDFFLADI LTSMSKVLSD LERSVCRMVH RQVATVAWFE ADSVCGSHSA AIPLVLVLPY LFRLFQCIRQ YKDSKDIANI YNAGKYLTAV
301: PVIFLSALKY YIDPDTWTYS IQPAWILSGL ANTFFSFFWD ILRDWDLSVF TRIFKFTRPN LFSHLLYGRR WVYVWVIGSN LVLRWTWTYK LSAHLRNNYI
401: TVFIITALEI YRRFQWAFFR IENVWYKINN PKHTAHQSNP LSLQHDIDSE HEKLLAHSHS PGV
Arabidopsis Description
EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:F4ISV2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.