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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52351 Canola cytosol, peroxisome, plasma membrane 94.79 96.38
CDX92696 Canola cytosol, peroxisome, plasma membrane 83.56 84.02
AT4G25350.1 Thale cress cytosol 80.14 78.52
CDY44990 Canola extracellular, golgi 7.95 75.32
CDX82870 Canola cytosol 67.12 65.6
CDY16184 Canola cytosol 65.75 64.86
CDY58396 Canola cytosol 65.34 64.63
CDY46445 Canola cytosol 66.16 64.57
CDY71475 Canola extracellular, golgi, plasma membrane 23.29 62.96
CDY45173 Canola cytosol, golgi, peroxisome 14.93 61.24
CDY39346 Canola plasma membrane 33.29 59.71
CDY56003 Canola plasma membrane 45.48 56.37
CDY72508 Canola golgi, peroxisome 33.56 54.93
CDY33781 Canola cytosol 55.21 53.31
CDY16129 Canola cytosol 55.21 52.89
CDY04251 Canola endoplasmic reticulum, mitochondrion 6.03 51.76
CDY03008 Canola cytosol, peroxisome, plasma membrane 53.56 51.45
CDX98143 Canola cytosol 55.21 50.76
CDY03007 Canola cytosol 54.79 50.13
CDY04143 Canola cytosol 55.34 50.12
CDY04052 Canola nucleus 44.52 50.08
CDY45174 Canola cytosol, peroxisome, plasma membrane 54.25 49.5
CDY16128 Canola cytosol 52.74 49.36
CDY04142 Canola cytosol, nucleus, plasma membrane 54.52 49.32
CDY45175 Canola cytosol, nucleus, plasma membrane 52.19 49.1
CDY36429 Canola cytosol, peroxisome, plasma membrane 55.34 48.97
CDY09339 Canola cytosol 54.79 48.96
CDY37178 Canola cytosol 54.66 48.84
CDY03011 Canola cytosol, nucleus, plasma membrane 51.92 48.59
CDY65467 Canola cytosol 51.23 48.45
CDY64495 Canola cytosol 51.64 48.15
CDX95933 Canola cytosol 50.68 47.19
CDY45171 Canola cytosol, peroxisome, plasma membrane 40.41 46.46
CDY40927 Canola cytosol 49.73 46.36
CDY44412 Canola cytosol, nucleus, plasma membrane 48.9 45.36
CDY56000 Canola cytosol 45.62 44.88
CDY00103 Canola nucleus, peroxisome, plasma membrane 48.22 44.11
CDY19999 Canola cytosol, nucleus, plasma membrane 47.95 43.86
CDY33783 Canola cytosol, peroxisome, plasma membrane 32.74 42.75
CDY09011 Canola cytosol, peroxisome, plasma membrane 27.12 33.11
CDX85098 Canola cytosol, peroxisome, plasma membrane 24.93 32.27
CDY56002 Canola cytosol 13.84 30.89
CDX95992 Canola cytosol 31.92 30.26
CDY54499 Canola cytosol 31.92 30.26
CDY04252 Canola cytosol 31.92 30.22
CDY38614 Canola cytosol 31.64 30.0
CDX81539 Canola cytosol 31.64 30.0
CDY07366 Canola cytosol 32.19 29.45
CDX77515 Canola cytosol 32.47 29.19
CDY18123 Canola cytosol 27.95 26.74
CDY36431 Canola cytosol 7.95 26.48
CDY60937 Canola cytosol, nucleus, plasma membrane 55.48 24.05
CDX74638 Canola golgi, plasma membrane, plastid 14.38 23.03
CDY33680 Canola golgi, plasma membrane, plastid 14.52 22.99
CDX84740 Canola plasma membrane 9.45 22.26
CDX84739 Canola plasma membrane, plastid 13.97 21.98
CDY65458 Canola plasma membrane, plastid 13.84 21.72
CDY09013 Canola nucleus 5.34 19.7
CDX98567 Canola golgi, nucleus, plasma membrane 4.93 17.65
CDY52794 Canola nucleus 6.03 15.49
CDY58360 Canola endoplasmic reticulum, plasma membrane 2.6 13.1
CDY71691 Canola endoplasmic reticulum, extracellular, plasma membrane 2.33 12.5
CDX82438 Canola cytosol 3.29 11.88
CDX76897 Canola mitochondrion 1.78 10.83
CDY22918 Canola cytosol 3.42 10.78
CDX81844 Canola cytosol 2.6 10.56
Protein Annotations
MapMan:24.2.7.4MapMan:25.3.2.2GO:A0A078F370UniProt:A0A078F370EnsemblPlants:CDY08975ProteinID:CDY08975
ProteinID:CDY08975.1ncoils:CoilInterPro:EXS_CGO:GO:0005575GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00001030001InterPro:IPR004331InterPro:IPR004342PFAM:PF03105PFAM:PF03124InterPro:PHO1_SPX
PFscan:PS51380PFscan:PS51382PANTHER:PTHR10783PANTHER:PTHR10783:SF43InterPro:SPX_domTMHMM:TMhelix
UniParc:UPI0004EDC34CSEG:seg::::
Description
BnaC08g12050DBnaC08g12050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F370]
Coordinates
chrLK031990:-:935505..938812
Molecular Weight (calculated)
84823.1 Da
IEP (calculated)
9.834
GRAVY (calculated)
-0.072
Length
730 amino acids
Sequence
(BLAST)
001: MRFGREFVSK MIPEWQEAYI DYAYLKTILQ DIQATRKISV SNSQSKPSFA RNLTRRYTRN ASVSENHVIV FNAVTHAGYE HDMTYETAFL KTGEPGGDSE
101: AAFFRTLDRE FNKVNSFYRL KVEKARNQSL ALSKQMDALV AFRHRVKEKK PSSSDSVSVD INALSSKSKE NKVTLGDHIK NEANKSILEG IRMNRTLETP
201: LSAIKTILKV HKQEELKFTR ENLKKVEERL QRAFIKFYQK LGHLKNYSFL NTSAVSKIMK KYDKIAARNA AKQYMEMVDS SYLTSSDEIH KLMVRAESTV
301: IEHFCNSNRR QGMNLLRPKE NKELHRTTFS TGFFFGCATS LIIALALIIH ARNIMGTPGQ RTYMETMFPL YRFFGFVVLH VVMYAANIYF WGIYRVNYPF
401: IFGFKQGTEL GYRHVLLLSF GLGTLSLCAV LLNLDMEMDS QTKDYRIVTE LIPLFLLALV VAITLCPFNI LYRSSRFFFL TVLFRCIAAP FYTVNLPDFF
501: LADQLTSQVQ ALRSLEFYIC YYGIGDFRQR QRNTCRSNDV FTTFYFIVAV IPYWLRFIQC IRRIIEENDL SHGYNAAKYL LTIVAACLRT AYTLNRGTTW
601: NITAWVFSGV ATLYATYWDI VIDWGLLQRG CKNSFLRDKL LVPHKTVYYA AMVLNVLLRL VWLQTVLDLK FSFLHRETLV ALLACLEIIC RGIWNFFRLE
701: NEHLNNVGKF RAFKSVPLPF NYQEDRDQDN
Best Arabidopsis Sequence Match ( AT4G25350.1 )
(BLAST)
001: MRFGKEFVSQ MIPEWQEAYI DYAYLKTILQ DIQASRNRSD SNNQSSTPSF ARNLTRRYNR DALVSENHDI VVNTVTRLEE GLETAAYETT FLKAGEAGGD
101: FEVTFFRTLD REFNKVNNFY RLKVETARTE ALALNKQMDA LIAFRHKVMD QNQKNPSVFD SVSEDINGSA SEVGSSSKCT EHNVALADLM RNEDTSNESI
201: LERIRMNKTR EITPLSAIKT ILKVHKQDEL KFTRDNLKEV EKRLQVAFIE FYQKLRHLKN YSFLNASAVS KIMKKYDKIA KRNAAKLYME MVDKSFLSSS
301: EEVHKLLLKV ESIFIEHFSN SNRREGMSHL RPKINKERHL ITFSTGFFFG CGISLIVALG LIIHARNIMG TPGQRTYMET MFPLYRFFGF VVLHMDVYAA
401: NIYFWRRYRV NYSFIFGFKQ GTELGYRHVL LLSFGLGTLS LCAVLLNLDM EMDAQTKDYR LVTELIPLFL LVLVIIIVLC PFNILYRSSR FFFLSVLFRC
501: IAAPFYAVHL PDFFLGDQLT SQVQALRSLE FYICYYGFGD FRYRRRNTCT SNIGFRTFYF IVAVIPYWLR FLQCIRRMVE DRDLSHGYNG IKYLLTIVAA
601: SLRTAYTLNR GSNWNITAWV FSGVATFYGT YWDIVLDWGL LQRGCKNSFL RDKLLVPHKT VYYAAMVLNV LLRLVWLQTV LDLKFSFLHR ETMVALMACL
701: EIIRRGIWNF FRLENEHLNN VGRYRAFKTV PLPFNYEEDG DHHNN
Arabidopsis Description
PHO1-H4Phosphate transporter PHO1 homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.