Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52351 | Canola | cytosol, peroxisome, plasma membrane | 77.58 | 80.5 |
| CDY08975 | Canola | cytosol, peroxisome, plasma membrane | 78.52 | 80.14 |
| Bra010468.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 78.39 | 80.0 |
| CDX92696 | Canola | cytosol, peroxisome, plasma membrane | 77.72 | 79.75 |
| AT1G26730.1 | Thale cress | cytosol | 65.64 | 65.2 |
| AT1G35350.1 | Thale cress | cytosol | 65.5 | 64.98 |
| AT1G14040.1 | Thale cress | cytosol | 57.72 | 52.89 |
| AT2G03240.1 | Thale cress | cytosol, nucleus, plasma membrane | 55.7 | 50.43 |
| AT1G69480.2 | Thale cress | cytosol | 50.87 | 48.78 |
| AT2G03260.1 | Thale cress | cytosol, peroxisome, plasma membrane | 52.35 | 48.33 |
| AT2G03250.1 | Thale cress | cytosol | 46.44 | 48.12 |
| AT3G29060.1 | Thale cress | cytosol, nucleus, plasma membrane | 47.79 | 44.5 |
| AT3G23430.1 | Thale cress | cytosol, nucleus, plasma membrane | 33.69 | 32.1 |
| AT1G68740.1 | Thale cress | cytosol | 32.89 | 31.25 |
| AT5G35730.1 | Thale cress | plastid | 14.5 | 23.63 |
| AT2G32295.2 | Thale cress | plasma membrane | 14.63 | 23.54 |
Protein Annotations
| MapMan:24.2.7.4 | MapMan:25.3.2.2 | EntrezGene:828638 | ProteinID:AEE85045.1 | ArrayExpress:AT4G25350 | EnsemblPlantsGene:AT4G25350 |
| RefSeq:AT4G25350 | TAIR:AT4G25350 | RefSeq:AT4G25350-TAIR-G | EnsemblPlants:AT4G25350.1 | TAIR:AT4G25350.1 | EMBL:AY507956 |
| ProteinID:CAB45511.1 | ProteinID:CAB81346.1 | ncoils:Coil | InterPro:EXS_C | GO:GO:0000003 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005802 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006817 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009960 |
| GO:GO:0009987 | GO:GO:0010017 | GO:GO:0010468 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0040007 | GO:GO:0045793 | GO:GO:0080050 | GO:GO:0080113 | InterPro:IPR004331 | InterPro:IPR004342 |
| RefSeq:NP_194265.2 | PFAM:PF03105 | PFAM:PF03124 | InterPro:PHO1_SPX | PO:PO:0000293 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009046 | PO:PO:0009089 | PFscan:PS51380 | PFscan:PS51382 |
| PANTHER:PTHR10783 | PANTHER:PTHR10783:SF43 | UniProt:Q6R8G6 | Symbol:SHB1 | InterPro:SPX_dom | TMHMM:TMhelix |
| UniParc:UPI0000237AE8 | SEG:seg | : | : | : | : |
Description
PHO1-H4Phosphate transporter PHO1 homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G6]
Coordinates
chr4:-:12962965..12966629
Molecular Weight (calculated)
86990.4 Da
IEP (calculated)
9.510
GRAVY (calculated)
-0.099
Length
745 amino acids
Sequence
(BLAST)
(BLAST)
001: MRFGKEFVSQ MIPEWQEAYI DYAYLKTILQ DIQASRNRSD SNNQSSTPSF ARNLTRRYNR DALVSENHDI VVNTVTRLEE GLETAAYETT FLKAGEAGGD
101: FEVTFFRTLD REFNKVNNFY RLKVETARTE ALALNKQMDA LIAFRHKVMD QNQKNPSVFD SVSEDINGSA SEVGSSSKCT EHNVALADLM RNEDTSNESI
201: LERIRMNKTR EITPLSAIKT ILKVHKQDEL KFTRDNLKEV EKRLQVAFIE FYQKLRHLKN YSFLNASAVS KIMKKYDKIA KRNAAKLYME MVDKSFLSSS
301: EEVHKLLLKV ESIFIEHFSN SNRREGMSHL RPKINKERHL ITFSTGFFFG CGISLIVALG LIIHARNIMG TPGQRTYMET MFPLYRFFGF VVLHMDVYAA
401: NIYFWRRYRV NYSFIFGFKQ GTELGYRHVL LLSFGLGTLS LCAVLLNLDM EMDAQTKDYR LVTELIPLFL LVLVIIIVLC PFNILYRSSR FFFLSVLFRC
501: IAAPFYAVHL PDFFLGDQLT SQVQALRSLE FYICYYGFGD FRYRRRNTCT SNIGFRTFYF IVAVIPYWLR FLQCIRRMVE DRDLSHGYNG IKYLLTIVAA
601: SLRTAYTLNR GSNWNITAWV FSGVATFYGT YWDIVLDWGL LQRGCKNSFL RDKLLVPHKT VYYAAMVLNV LLRLVWLQTV LDLKFSFLHR ETMVALMACL
701: EIIRRGIWNF FRLENEHLNN VGRYRAFKTV PLPFNYEEDG DHHNN
101: FEVTFFRTLD REFNKVNNFY RLKVETARTE ALALNKQMDA LIAFRHKVMD QNQKNPSVFD SVSEDINGSA SEVGSSSKCT EHNVALADLM RNEDTSNESI
201: LERIRMNKTR EITPLSAIKT ILKVHKQDEL KFTRDNLKEV EKRLQVAFIE FYQKLRHLKN YSFLNASAVS KIMKKYDKIA KRNAAKLYME MVDKSFLSSS
301: EEVHKLLLKV ESIFIEHFSN SNRREGMSHL RPKINKERHL ITFSTGFFFG CGISLIVALG LIIHARNIMG TPGQRTYMET MFPLYRFFGF VVLHMDVYAA
401: NIYFWRRYRV NYSFIFGFKQ GTELGYRHVL LLSFGLGTLS LCAVLLNLDM EMDAQTKDYR LVTELIPLFL LVLVIIIVLC PFNILYRSSR FFFLSVLFRC
501: IAAPFYAVHL PDFFLGDQLT SQVQALRSLE FYICYYGFGD FRYRRRNTCT SNIGFRTFYF IVAVIPYWLR FLQCIRRMVE DRDLSHGYNG IKYLLTIVAA
601: SLRTAYTLNR GSNWNITAWV FSGVATFYGT YWDIVLDWGL LQRGCKNSFL RDKLLVPHKT VYYAAMVLNV LLRLVWLQTV LDLKFSFLHR ETMVALMACL
701: EIIRRGIWNF FRLENEHLNN VGRYRAFKTV PLPFNYEEDG DHHNN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.