Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035386.1-P | Field mustard | golgi, plasma membrane, plastid | 95.19 | 95.39 |
| CDX74638 | Canola | golgi, plasma membrane, plastid | 95.19 | 95.39 |
| CDY33680 | Canola | golgi, plasma membrane, plastid | 95.4 | 94.58 |
| KRH40514 | Soybean | plasma membrane | 73.74 | 80.24 |
| KRH00677 | Soybean | plasma membrane | 73.74 | 80.24 |
| Os12t0595000-01 | Rice | plasma membrane | 69.8 | 75.59 |
| TraesCS5A01G062900.1 | Wheat | plasma membrane | 69.15 | 74.53 |
| EES17313 | Sorghum | plasma membrane | 68.71 | 74.41 |
| TraesCS5D01G074100.1 | Wheat | plasma membrane | 68.93 | 74.29 |
| TraesCS5B01G070200.1 | Wheat | plasma membrane | 68.71 | 74.06 |
| TraesCS7D01G365900.3 | Wheat | plasma membrane | 68.93 | 72.75 |
| TraesCS7A01G356800.1 | Wheat | plasma membrane | 68.93 | 72.75 |
| TraesCS7B01G271100.2 | Wheat | plasma membrane | 68.71 | 72.52 |
| GSMUA_Achr7P00360_001 | Banana | plasma membrane | 73.09 | 70.32 |
| GSMUA_Achr4P23610_001 | Banana | plasma membrane | 72.43 | 69.39 |
| OQU79488 | Sorghum | golgi, plasma membrane | 33.04 | 69.27 |
| Zm00001d030939_P004 | Maize | plasma membrane | 68.49 | 68.94 |
| Zm00001d041383_P002 | Maize | plasma membrane | 67.83 | 68.28 |
| HORVU5Hr1G016790.15 | Barley | peroxisome, plastid | 68.49 | 62.35 |
| AT2G32295.2 | Thale cress | plasma membrane | 60.39 | 59.61 |
| AT1G26730.1 | Thale cress | cytosol | 24.95 | 15.2 |
| AT1G69480.2 | Thale cress | cytosol | 25.16 | 14.8 |
| AT1G68740.1 | Thale cress | cytosol | 25.38 | 14.8 |
| AT1G35350.1 | Thale cress | cytosol | 23.85 | 14.51 |
| AT4G25350.1 | Thale cress | cytosol | 23.63 | 14.5 |
| AT3G23430.1 | Thale cress | cytosol, nucleus, plasma membrane | 24.51 | 14.32 |
| AT3G29060.1 | Thale cress | cytosol, nucleus, plasma membrane | 24.51 | 14.0 |
| AT1G14040.1 | Thale cress | cytosol | 24.29 | 13.65 |
| AT2G03240.1 | Thale cress | cytosol, nucleus, plasma membrane | 24.07 | 13.37 |
| AT2G03260.1 | Thale cress | cytosol, peroxisome, plasma membrane | 22.76 | 12.89 |
| AT2G03250.1 | Thale cress | cytosol | 19.04 | 12.1 |
Protein Annotations
| MapMan:35.1 | EntrezGene:833549 | ProteinID:AED94009.1 | ArrayExpress:AT5G35730 | EnsemblPlantsGene:AT5G35730 | RefSeq:AT5G35730 |
| TAIR:AT5G35730 | RefSeq:AT5G35730-TAIR-G | EnsemblPlants:AT5G35730.1 | TAIR:AT5G35730.1 | EMBL:AY070048 | EMBL:AY086064 |
| Unigene:At.28421 | EMBL:BT001971 | InterPro:EXS_C | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR004342 | RefSeq:NP_568530.1 |
| PFAM:PF03124 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51380 |
| PANTHER:PTHR10783 | PANTHER:PTHR10783:SF46 | UniProt:Q8VYS9 | TMHMM:TMhelix | UniParc:UPI000000BD73 | : |
Description
EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:Q8VYS9]
Coordinates
chr5:+:13893602..13896976
Molecular Weight (calculated)
53564.6 Da
IEP (calculated)
8.834
GRAVY (calculated)
0.263
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MFENPASNSP HLRKSSSKSV FIDPGLNGHL GEMGDLKGSN SPLHITTMVP SPIFLWRFKV VLFLFWALCC CKIGWDSVMR MSIDLRDLFL YEAFLYYNPL
101: LLVTMMVWLW GVNLWVFSQG SVNYSKVFDL DHNHLTHREM WKCSMWMTII VPTSMTAYLY LYSHGEVSLA ASQPVLLYIA FALVLIFPFD IFYLSSRYFL
201: LRTLWRIAFP LQPITFPDFF LADILTSMVK VFSDLERSVC RMVHRQVATI AWFEADAVCG SHQIAIPLVL VFPYICRLLQ CLRQYKDTKE KSSLLNALKY
301: STAVPVIFLS ALKYHVMPES WTSFYRPLWL FSSVINSLYS FYWDVTRDWD LSGFTKIFKF SRPSTISNLL YGRQWVYFWV IGSNLVLRCA WTYKLSAHLR
401: HNYITVFTMT AMEMLRRFQW VFFRVENEWN KITKSHPMGE ISLEEDKLLG STTPHDV
101: LLVTMMVWLW GVNLWVFSQG SVNYSKVFDL DHNHLTHREM WKCSMWMTII VPTSMTAYLY LYSHGEVSLA ASQPVLLYIA FALVLIFPFD IFYLSSRYFL
201: LRTLWRIAFP LQPITFPDFF LADILTSMVK VFSDLERSVC RMVHRQVATI AWFEADAVCG SHQIAIPLVL VFPYICRLLQ CLRQYKDTKE KSSLLNALKY
301: STAVPVIFLS ALKYHVMPES WTSFYRPLWL FSSVINSLYS FYWDVTRDWD LSGFTKIFKF SRPSTISNLL YGRQWVYFWV IGSNLVLRCA WTYKLSAHLR
401: HNYITVFTMT AMEMLRRFQW VFFRVENEWN KITKSHPMGE ISLEEDKLLG STTPHDV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.