CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56002	Canola	cytosol	41.55	27.83
CDY09013	Canola	nucleus	18.26	20.2
CDY56000	Canola	cytosol	67.12	19.81
CDY33783	Canola	cytosol, peroxisome, plasma membrane	49.32	19.32
CDY52794	Canola	nucleus	19.18	14.79
CDY45171	Canola	cytosol, peroxisome, plasma membrane	42.01	14.49
CDX98143	Canola	cytosol	52.51	14.48
CDY36429	Canola	cytosol, peroxisome, plasma membrane	52.51	13.94
CDY16128	Canola	cytosol	48.86	13.72
CDY33781	Canola	cytosol	43.84	12.7
CDY16129	Canola	cytosol	43.38	12.47
CDY03007	Canola	cytosol	42.92	11.78
CDY03011	Canola	cytosol, nucleus, plasma membrane	41.55	11.67
CDY45175	Canola	cytosol, nucleus, plasma membrane	41.1	11.6
CDY37178	Canola	cytosol	42.47	11.38
CDY09339	Canola	cytosol	42.47	11.38
CDY04142	Canola	cytosol, nucleus, plasma membrane	41.55	11.28
CDY45174	Canola	cytosol, peroxisome, plasma membrane	40.64	11.12
CDY04143	Canola	cytosol	40.64	11.04
CDY03008	Canola	cytosol, peroxisome, plasma membrane	36.53	10.53
CDY64495	Canola	cytosol	34.7	9.71
CDY65467	Canola	cytosol	33.33	9.46
CDX82870	Canola	cytosol	31.51	9.24
CDX95933	Canola	cytosol	32.42	9.06
CDY46445	Canola	cytosol	30.59	8.96
CDY19999	Canola	cytosol, nucleus, plasma membrane	32.42	8.9
CDY44412	Canola	cytosol, nucleus, plasma membrane	31.96	8.89
CDY00103	Canola	nucleus, peroxisome, plasma membrane	31.96	8.77
CDY40927	Canola	cytosol	31.05	8.68
CDY58396	Canola	cytosol	29.22	8.67
CDY16184	Canola	cytosol	29.22	8.65
CDX92696	Canola	cytosol, peroxisome, plasma membrane	27.4	8.26
CDY52351	Canola	cytosol, peroxisome, plasma membrane	26.94	8.22
CDY08975	Canola	cytosol, peroxisome, plasma membrane	26.48	7.95
CDY04252	Canola	cytosol	22.37	6.36
CDY07366	Canola	cytosol	22.83	6.27
CDY38614	Canola	cytosol	21.92	6.23
CDX95992	Canola	cytosol	21.92	6.23
CDY04052	Canola	nucleus	18.26	6.16
CDX81539	Canola	cytosol	21.46	6.1
CDY54499	Canola	cytosol	21.0	5.97
CDX85098	Canola	cytosol, peroxisome, plasma membrane	15.07	5.85
CDY18123	Canola	cytosol	20.09	5.77
CDY60937	Canola	cytosol, nucleus, plasma membrane	41.55	5.4
CDX77515	Canola	cytosol	19.18	5.17
CDX81844	Canola	cytosol	4.11	5.0
CDX82438	Canola	cytosol	3.65	3.96
CDX98567	Canola	golgi, nucleus, plasma membrane	3.2	3.43
CDY22918	Canola	cytosol	3.2	3.02
CDY33680	Canola	golgi, plasma membrane, plastid	5.94	2.82
CDX74638	Canola	golgi, plasma membrane, plastid	5.48	2.63
CDX84739	Canola	plasma membrane, plastid	4.11	1.94
CDY65458	Canola	plasma membrane, plastid	4.11	1.94
CDX76897	Canola	mitochondrion	0.91	1.67
CDY56003	Canola	plasma membrane	4.11	1.53
CDY58360	Canola	endoplasmic reticulum, plasma membrane	0.91	1.38
CDY04251	Canola	endoplasmic reticulum, mitochondrion	0.46	1.18
CDY39346	Canola	plasma membrane	1.83	0.98
CDY72508	Canola	golgi, peroxisome	1.83	0.9
CDY71691	Canola	endoplasmic reticulum, extracellular, plasma membrane	0.46	0.74
CDY09011	Canola	cytosol, peroxisome, plasma membrane	1.83	0.67
CDY45173	Canola	cytosol, golgi, peroxisome	0.0	0.0
CDY44990	Canola	extracellular, golgi	0.0	0.0
CDX84740	Canola	plasma membrane	0.0	0.0
CDY71475	Canola	extracellular, golgi, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDY36431	EnsemblPlantsGene:GSBRNA2T00062057001	InterPro:IPR004331	InterPro:SPX_dom	ncoils:Coil	PANTHER:PTHR10783
PANTHER:PTHR10783:SF43	PFAM:PF03105	PFscan:PS51382	ProteinID:CDY36431	ProteinID:CDY36431.1	SEG:seg
UniParc:UPI0004EDB1F0	UniProt:A0A078HF65	MapMan:35.1	:	:	:

Description

BnaC05g10320DBnaC05g10320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HF65]

Coordinates

chrLK032375:+:346878..348213

Molecular Weight (calculated)

25173.9 Da

IEP (calculated)

6.530

GRAVY (calculated)

-0.744

Length

219 amino acids

Sequence
(BLAST)

001: MKFGKEFSSQ MVSEWQQAYM DYDYLKTLLK HRDHHSGGLN GKMTLDSLFS CLQLFTPQRQ RLCNSQDVEG GVQLKAKTTT TRPIQVETTA DGQVQTKFLI
101: EEEVGEYERE FFGRLDKEFN KVIKFYEEKV KKVLKEEEGL KGKLEALITA GSKHNDIKYS RWKRVANIAS RAKVENPERC EWEERDEEIT PLSADISPSS
201: PVGAKSSKEP CDIAREVIL

Best Arabidopsis Sequence Match ( AT1G14040.1 )
(BLAST)

001: MKFGKEFSSQ MVPEWQQAYM DYDFLKTLLK EIITFKRRTN NAPSHGGAKT GGGLNRKLTL YRAFSGLVST PRHKRSNSSH DVEEGVQLTG SMRSGPILVN
101: TTASHGYETT FLMAAEEGGE YELVFFRRLD DEFNKVDKFY RKKVEEVLKE AAMLNKQMDA LIAFRVKVEN PDGWRWEERT VEMTRLASDI ATSAAALSAS
201: TPAGAKSMKV RSQEHMEAIQ EGGSSRAGLM EDDEEDEDEQ NETSVVSTGA IDNETTTSRM RGARPSPIDV LGRVKINNTK ETPRSTIKGV LKVSKQTDLK
301: FSRENLMKVE ESLKRAFIEF YQKLRLLKSY SFLNVLAFSK ILKKYDKITS RDATKPYMKV VDSSYLGSSD EVMRLMERVE ATFIKHFANA NRAKAMNILR
401: PKAKRERHRI TFSTGFSAGC VFSLIVALVA IIRTRNLLEM EGQKEYMNTM FPLYSLFGFI VLHIIVYAAN IYYWRRYRVN YSFIFGFKQG TELGYRQVLL
501: VGFSIGVLAL LCVLANLDME ADPKTKAYQA RTEILPLILL AAMFIVLVLP FNYFYRSSRF FFLTCLFHCL AAPLYKVTLP DFFLGDQLTS QVQAIRSIEF
601: YICYYGWGDF RHRKSTCKES DVYNTFFFIV AVIPYVSRLL QCLRRLFEEK NPEQGYNGLK YFLTIVAVCL RTAYSIQKGQ VAWRVLAAVF SFIAAIFCTY
701: WDFVHDWGLL NRTSKNRWLR DKLLVPQKKV YFIAMVLNVL LRFAWIQTVL DFNFSFMHRQ TMVAIVASLE IIRRGIWNFF RLENEHLNNV GKYRAFKSVP
801: LPFNYDEDDD KDN

Arabidopsis Description

PHO1;H3Phosphate transporter PHO1 homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.