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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004017.1-P Field mustard cytosol 90.85 96.93
CDY04252 Canola cytosol 91.48 94.68
CDY54499 Canola cytosol 88.97 92.21
CDX81539 Canola cytosol 88.85 92.08
CDX95992 Canola cytosol 88.72 91.95
CDY38614 Canola cytosol 88.72 91.95
AT1G68740.1 Thale cress cytosol 86.72 88.27
CDY04251 Canola endoplasmic reticulum, mitochondrion 9.15 85.88
CDY52794 Canola nucleus 30.2 84.86
VIT_01s0011g02520.t01 Wine grape cytosol 71.93 72.66
KRH71113 Soybean cytosol 69.67 70.47
Solyc05g010060.2.1 Tomato cytosol 68.92 69.97
KRH75548 Soybean cytosol 69.3 69.91
GSMUA_Achr1P20650_001 Banana cytosol 67.17 67.34
TraesCS7B01G129700.1 Wheat cytosol, peroxisome, plasma membrane 60.65 59.75
PGSC0003DMT400064691 Potato cytosol, nucleus, plasma membrane 49.5 59.22
Os01t0110100-01 Rice cytosol 59.15 59.07
Os06t0493600-01 Rice cytosol 59.77 57.61
KXG19968 Sorghum peroxisome 60.65 56.81
Zm00001d037468_P001 Maize peroxisome 52.51 56.62
TraesCS7D01G231300.1 Wheat cytosol, peroxisome, plasma membrane 60.4 56.37
TraesCS7A01G231200.1 Wheat cytosol, peroxisome, plasma membrane 60.28 56.26
EES00442 Sorghum cytosol, peroxisome, plasma membrane 59.65 55.93
HORVU7Hr1G047210.9 Barley cytosol, peroxisome, plasma membrane 60.65 55.06
CDY44990 Canola extracellular, golgi 5.26 54.55
Zm00001d040125_P001 Maize cytosol 50.5 53.1
CDY09011 Canola cytosol, peroxisome, plasma membrane 38.22 51.0
CDX85098 Canola cytosol, peroxisome, plasma membrane 34.96 49.47
CDX77515 Canola cytosol 46.87 46.06
CDY45173 Canola cytosol, golgi, peroxisome 9.65 43.26
CDY71475 Canola extracellular, golgi, plasma membrane 14.04 41.48
CDY18123 Canola cytosol 37.72 39.45
CDY04052 Canola nucleus 28.95 35.59
CDY56003 Canola plasma membrane 25.44 34.47
CDY09013 Canola nucleus 8.4 33.84
CDY39346 Canola plasma membrane 17.04 33.42
CDY33781 Canola cytosol 31.45 33.2
CDY72508 Canola golgi, peroxisome 18.55 33.18
CDY52351 Canola cytosol, peroxisome, plasma membrane 29.57 32.87
CDY16129 Canola cytosol 31.33 32.81
CDX82870 Canola cytosol 30.45 32.53
CDX92696 Canola cytosol, peroxisome, plasma membrane 29.57 32.51
CDY16184 Canola cytosol 30.08 32.43
CDY58396 Canola cytosol 29.95 32.38
CDY03008 Canola cytosol, peroxisome, plasma membrane 30.83 32.37
CDX98143 Canola cytosol 32.08 32.24
CDY46445 Canola cytosol 30.2 32.22
CDY04142 Canola cytosol, nucleus, plasma membrane 32.58 32.22
CDY08975 Canola cytosol, peroxisome, plasma membrane 29.45 32.19
CDY44412 Canola cytosol, nucleus, plasma membrane 31.58 32.02
CDY04143 Canola cytosol 32.33 32.01
CDY03011 Canola cytosol, nucleus, plasma membrane 31.08 31.79
CDY03007 Canola cytosol 31.7 31.7
CDY09339 Canola cytosol 32.46 31.7
CDY45175 Canola cytosol, nucleus, plasma membrane 30.83 31.7
CDY37178 Canola cytosol 32.33 31.58
CDY45174 Canola cytosol, peroxisome, plasma membrane 31.58 31.5
CDY65467 Canola cytosol 30.45 31.48
CDY19999 Canola cytosol, nucleus, plasma membrane 31.45 31.45
CDY00103 Canola nucleus, peroxisome, plasma membrane 31.33 31.33
CDY64495 Canola cytosol 30.58 31.16
CDY36429 Canola cytosol, peroxisome, plasma membrane 32.08 31.03
CDY40927 Canola cytosol 30.2 30.78
CDX95933 Canola cytosol 30.08 30.61
CDY16128 Canola cytosol 29.82 30.51
CDY56000 Canola cytosol 27.57 29.65
CDY45171 Canola cytosol, peroxisome, plasma membrane 22.43 28.19
CDY33783 Canola cytosol, peroxisome, plasma membrane 17.79 25.4
CDX74638 Canola golgi, plasma membrane, plastid 14.16 24.78
CDY33680 Canola golgi, plasma membrane, plastid 14.16 24.51
CDY56002 Canola cytosol 9.65 23.55
CDX84739 Canola plasma membrane, plastid 13.41 23.06
CDY36431 Canola cytosol 6.27 22.83
CDY65458 Canola plasma membrane, plastid 13.28 22.8
CDX84740 Canola plasma membrane 8.27 21.29
CDX98567 Canola golgi, nucleus, plasma membrane 4.76 18.63
CDY71691 Canola endoplasmic reticulum, extracellular, plasma membrane 2.88 16.91
CDY60937 Canola cytosol, nucleus, plasma membrane 32.46 15.38
CDY58360 Canola endoplasmic reticulum, plasma membrane 2.76 15.17
CDX76897 Canola mitochondrion 2.13 14.17
CDX82438 Canola cytosol 3.38 13.37
CDY22918 Canola cytosol 3.63 12.5
CDX81844 Canola cytosol 2.26 10.0
Protein Annotations
MapMan:24.2.7.4MapMan:25.3.2.2GO:A0A078F1T7UniProt:A0A078F1T7EnsemblPlants:CDY07366ProteinID:CDY07366
ProteinID:CDY07366.1InterPro:EXS_CGO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00124336001
InterPro:IPR004331InterPro:IPR004342PFAM:PF03105PFAM:PF03124InterPro:PHO1_SPXPFscan:PS51380
PFscan:PS51382PANTHER:PTHR10783PANTHER:PTHR10783:SF35InterPro:SPX_domTMHMM:TMhelixUniParc:UPI0004EDB718
SEG:seg:::::
Description
BnaA07g24450DBnaA07g24450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F1T7]
Coordinates
chrLK031978:+:248913..252481
Molecular Weight (calculated)
92682.4 Da
IEP (calculated)
9.089
GRAVY (calculated)
-0.180
Length
798 amino acids
Sequence
(BLAST)
001: MVQFTKQFEG QLVPEWKDAF VDYAQLKKDL KKIHLLTSGV EEEHTETSLI KTINSSLGKL SLFGNKERER PRAIKVHTKL ASSVSNSDVY ETELLETIAD
101: DTDAAKEFFM CLDTQLNKVN QFYKTKEKEF LERGECLKKQ MEILIEVKDA FNQKQANGEP TQESKKDDSI SCTISSEEDS IKSRTEETEL QEYCLEDLDN
201: NGKEALESPR SEESIIINNE DSKLRTVSGR VFSCQGRNLN IKIPLTNPSR KFSAISYFIK EDLINQSSSK RRGPDGVNKL RISKKTLNHA EKMIKGALTE
301: LYKGLNYLKT YRNLNMLAFM NILKKFDKVT GKQILPIYLK VVESSYFNSS DKVINLSDEV EEWFIKHFTG ENRRKAMKYL KPHHRKESHS VTFFIGLFTG
401: GFVALLAGYI IVAHLTGMYR KQSEKTVYME TAYPVLRRKT NANLVFMFGL LFLHLFLYGC NIFMWRKARI NYSFIFELGS ENELKFRDVF LICTASMSVI
501: VGVMFVHLLL LAKGYSFGQV QVIPGLLLLV FFLTLIFPLN IFYKSSRYRL ISVIRNIVFS PLYKVVMLDF FMADQLCSQV PMLRNLEYIA CYYITGSYAT
601: QDYGYCMRVK YYRDLAYAVS FLPYYWRAMQ CARRWFDEGE TSHLVNLGKY VSAMLAAGTK VAYEKEGSIG WLCLVVVMSS IATVYQLYWD FVKDWGLLQH
701: NSNNPWLRNQ LMLRQKSIYY FSMVLNIVLR LAWLQTVLHS SFEHVNYRVT GLFLAALEVI RRGHWNFYRL ENEHLNNAGN FRAVKTVPLP FREVDEED
Best Arabidopsis Sequence Match ( AT1G68740.1 )
(BLAST)
001: MVKFTKQFEG QLVPEWKDAF VDYSQLKKDL KKIHLFTNGV EKKHTETSLI KTVKSSLGRL SIFGNKGREQ SRVIQVHKKL ASSGSNNDVY ETELLEKIAD
101: DTDAAKEFFA CLDMQLNKVN QFYKTKEKEF LERGECLKKQ MDILIELKDA FKQKQANGES TQESKEDDSI SCTISCEYDS VRGRTEEMQL QVSCLDNLED
201: NGEEALESLG SEEPIKANNE DSKLTTVSSR VFSCQGKNVK IKIPLTNPSR TFSAISYLIN QSSSKKNGPD GGNKLQISKK KLSHAEKMIK GALTELFKGL
301: NYLKTYRNLN ILAFMNILKK FDKVTGKQIL PIYLKVVESS YFNISDKVMI LSDEVEEWFI KHLAGENRRK AMKYLKPHHR KESHSVTFFI GLFTGCFVAL
401: LAGYIIVAHL TGMYRQHSAN TFYMETAYPV LSMFGLLFLH LFLYGCNIFM WRKARINYSF IFELGSKNEL KYRDVFLICT ASMSAIAGVM FVHLSLLEKG
501: YSFRQVQVIP GLLLLGFLLI LICPLNIFYK SSRYRLISVI RNIVFSPLYK VVMLDFFMAD QLCSQVPMLR NLEYIACYYI TGSYATQDYE YCMRVKYYRD
601: LAYAVSFLPY YWRAMQCARR WFDEGETSHL VNLGKYVSAM LAAGTKVAYE KERSLGWLCL VVAMSSVATI YQLYWDFVKD WGLLQHNSNN PWLRNQLMLR
701: QKSIYYFSMV LNLVLRLAWL QTVLHSSFEH VDYRVTGLFL AALEVIRRGQ WNFYRLENEH LNNAGKFRAV KTVPLPFREV DEED
Arabidopsis Description
PHO1-H1Phosphate transporter PHO1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZF5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.