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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016284.1-P Field mustard cytosol 98.26 98.26
CDX82870 Canola cytosol 95.72 95.85
CDY44990 Canola extracellular, golgi 9.22 89.61
AT1G26730.1 Thale cress cytosol 82.35 82.13
CDY58396 Canola cytosol 80.88 81.98
AT1G35350.1 Thale cress cytosol 82.22 81.89
CDY16184 Canola cytosol 80.75 81.62
CDY71475 Canola extracellular, golgi, plasma membrane 24.2 67.04
CDY52351 Canola cytosol, peroxisome, plasma membrane 63.77 66.43
CDX92696 Canola cytosol, peroxisome, plasma membrane 64.44 66.39
CDY08975 Canola cytosol, peroxisome, plasma membrane 64.57 66.16
CDY39346 Canola plasma membrane 34.36 63.15
CDY45173 Canola cytosol, golgi, peroxisome 14.3 60.11
CDY56003 Canola plasma membrane 46.12 58.57
CDY33781 Canola cytosol 56.95 56.35
CDY16129 Canola cytosol 57.35 56.3
CDY72508 Canola golgi, peroxisome 33.56 56.28
CDY04143 Canola cytosol 58.96 54.71
CDY03008 Canola cytosol, peroxisome, plasma membrane 55.08 54.21
CDX98143 Canola cytosol 57.22 53.9
CDY04142 Canola cytosol, nucleus, plasma membrane 58.02 53.78
CDY03007 Canola cytosol 56.95 53.38
CDY37178 Canola cytosol 57.89 53.0
CDY16128 Canola cytosol 55.21 52.95
CDY09339 Canola cytosol 57.75 52.88
CDY45174 Canola cytosol, peroxisome, plasma membrane 56.42 52.75
CDY45175 Canola cytosol, nucleus, plasma membrane 54.55 52.58
CDY03011 Canola cytosol, nucleus, plasma membrane 54.81 52.56
CDY36429 Canola cytosol, peroxisome, plasma membrane 57.22 51.88
CDY64495 Canola cytosol 53.61 51.21
CDY04052 Canola nucleus 44.38 51.16
CDY45171 Canola cytosol, peroxisome, plasma membrane 43.32 51.02
CDY65467 Canola cytosol 52.54 50.91
CDY04251 Canola endoplasmic reticulum, mitochondrion 5.61 49.41
CDX95933 Canola cytosol 50.53 48.21
CDY56000 Canola cytosol 47.46 47.84
CDY40927 Canola cytosol 49.47 47.25
CDY44412 Canola cytosol, nucleus, plasma membrane 48.93 46.51
CDY33783 Canola cytosol, peroxisome, plasma membrane 34.36 45.98
CDY00103 Canola nucleus, peroxisome, plasma membrane 47.73 44.74
CDY19999 Canola cytosol, nucleus, plasma membrane 47.59 44.61
CDY56002 Canola cytosol 15.24 34.86
CDY09011 Canola cytosol, peroxisome, plasma membrane 27.14 33.95
CDX85098 Canola cytosol, peroxisome, plasma membrane 24.87 32.98
CDX95992 Canola cytosol 32.35 31.43
CDY54499 Canola cytosol 32.22 31.3
CDY38614 Canola cytosol 32.09 31.17
CDX77515 Canola cytosol 33.69 31.03
CDY04252 Canola cytosol 31.95 31.0
CDX81539 Canola cytosol 31.82 30.91
CDY36431 Canola cytosol 8.96 30.59
CDY07366 Canola cytosol 32.22 30.2
CDY18123 Canola cytosol 28.61 28.05
CDY60937 Canola cytosol, nucleus, plasma membrane 58.82 26.13
CDX74638 Canola golgi, plasma membrane, plastid 14.44 23.68
CDY33680 Canola golgi, plasma membrane, plastid 14.44 23.43
CDY09013 Canola nucleus 6.15 23.23
CDX84739 Canola plasma membrane, plastid 14.3 23.06
CDY65458 Canola plasma membrane, plastid 14.17 22.8
CDX84740 Canola plasma membrane 9.22 22.26
CDY52794 Canola nucleus 7.09 18.66
CDX98567 Canola golgi, nucleus, plasma membrane 4.95 18.14
CDX76897 Canola mitochondrion 2.27 14.17
CDY71691 Canola endoplasmic reticulum, extracellular, plasma membrane 2.54 13.97
CDX82438 Canola cytosol 3.74 13.86
CDY58360 Canola endoplasmic reticulum, plasma membrane 2.67 13.79
CDY22918 Canola cytosol 4.01 12.93
CDX81844 Canola cytosol 2.81 11.67
Protein Annotations
MapMan:24.2.7.4MapMan:25.3.2.2GO:A0A078I6C6UniProt:A0A078I6C6EnsemblPlants:CDY46445ProteinID:CDY46445
ProteinID:CDY46445.1ncoils:CoilInterPro:EXS_CGO:GO:0005575GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00083999001InterPro:IPR004331InterPro:IPR004342PFAM:PF03105PFAM:PF03124InterPro:PHO1_SPX
PFscan:PS51380PFscan:PS51382PANTHER:PTHR10783PANTHER:PTHR10783:SF43InterPro:SPX_domTMHMM:TMhelix
UniParc:UPI0004EE5F89SEG:seg::::
Description
BnaA08g19850DBnaA08g19850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6C6]
Coordinates
chrLK032666:-:184825..188896
Molecular Weight (calculated)
87067.7 Da
IEP (calculated)
9.636
GRAVY (calculated)
-0.096
Length
748 amino acids
Sequence
(BLAST)
001: MKFGEEFDGQ MVPEWQQAYM NYPCLKSILQ EIQNSRERSR TAGALRPKKS VHRNFSGLTK RYSRAASYLD LENQDIMVST RIGEDGFERY ETSIMRVAEA
101: GRESELVFFK TLDLEFDKVN HFYRSKVDEM VQEAVGLNKQ MDALFAYRLK VDRPSSSWTC SETVSVDVNA LDSKEQRRKS LADEMGIEIK ESNGGDSIKE
201: STPEALSVLD RIKLNKTQET PLSTIRNILK LSHQEELKFT RENLKKIEER LKKAFIEFYR KLRHLKNYSF LNTLAISKIM KKYDKISSRN AAKPYMEMVD
301: KSYLTSSDEI NKLMVRVESI FVEHFASSNR SKGMNLLRPI VKKERHRITF STGFFVGCSV SLVIALVLFI HARNIVGTAG QKLYMETMFP LYSLFGFIVL
401: HMIMYASNIY FWKKYRVNYA FIFGFKEGTE LGYRPVLLLS FGLGTLALAA VLINLDMEMD PNTNDYKTIT ELLPLFVVAI VMAISVCPFN IFYRSSRFFF
501: LAVIFRCIAA PLYKVSLPDF FLADQLTSQV QALRSLQFYV CYYGWGDFRL RRNTCRSSDV YNTFNFIVAV IPYWSRFLQC VRRLIEEKDI SQGFNALKYL
601: LTIVAVCLRT AYSLNRGNNW RLAAWVFSAL ATFYGTYWDI VHDWGFLHNP SKTWLREKLL VPNKAVYYVA MVVNVVLRLA WLQTVLDFNS SFLHRETMIA
701: LLAFLEIIRR GIWNFFRLEN EHLNNVGKFR AFTSVPLPFN YGEEEESR
Best Arabidopsis Sequence Match ( AT1G35350.1 )
(BLAST)
001: MKFGKEYVAQ MIPEWQQAYM DYTCLKTILR EIKTSQKRSE SQGVLKRKLS GRRNFSGLTK RYSRTFSSRD LENHDIMVHA TTGDDGFEKY ETTILKVSEV
101: GRESELVFFK TLDLEFDKVN RFYRSNVEEL VKEAVVLNRQ MDALIAYRIK LDQPSTSWSC SETVSVDINA LDSKEQKGKT LAEEMGIKVE ENVSNGGDST
201: KETAPEALSV LDRIRLNKNQ ENPLSTIRNV LKLSNKEDIK FTKENLKKIE ERLKNVFIEF YRKLRHLKNY SFLNTLAISK IMKKYDKIAL RNAAKLYMEM
301: VDKSYLTSSD EINKLMLRVE SIFVEHFAGS NRSKGMNLLR PKVTKEKHRI TFSTGFFVGC TVSLVIALGL FIHARNIMGA VGHKLYMETM FPLYSLFAFV
401: VLHMIMYASN IYFWKRYRVN YPFIFGFKEG TELGYGHVLL LSFGLGTLAL CAVLVNMDME MDPNTNDYKT ITELVPLFVV ALVIAISVCP FNIFYRSSRF
501: FFLMVLFRCI AAPLYKVNLP DFFLADQLTS QVQALRSLEF YICYYGWGDF KQRQSTCKSS DVYSTFYFIV AVIPYWSRFL QCVRRLIEEK DVSQGFNALK
601: YLLTIVAVCL RTAFSINRGN DWKIAAWVFS GLATFYGTYW DIVYDWGLLH RPSKSWLREK LLVPHKSVYY VAMVVNVVLR LAWLQTVLDF NISFLHRETM
701: VALIAILEII RRGIWNFFRL ENEHLNNVGK FRAFKSVPLP FNYDEEEDRD S
Arabidopsis Description
PHO1-H8Phosphate transporter PHO1 homolog 8 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.