Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40610 | Canola | cytosol | 73.38 | 72.44 |
| CDX93698 | Canola | cytosol | 72.08 | 71.15 |
| Bra018756.1-P | Field mustard | cytosol | 72.08 | 71.15 |
| AT4G34210.1 | Thale cress | cytosol | 68.18 | 69.08 |
| AT4G34470.1 | Thale cress | cytosol | 67.53 | 68.42 |
| CDY40611 | Canola | cytosol | 66.23 | 68.0 |
| AT1G75950.1 | Thale cress | cytosol | 68.18 | 65.62 |
| CDX93699 | Canola | cytosol | 68.18 | 65.62 |
| Bra018757.1-P | Field mustard | cytosol | 68.18 | 65.62 |
| AT2G03170.1 | Thale cress | cytosol | 61.69 | 63.76 |
| AT3G53060.1 | Thale cress | cytosol | 34.42 | 62.35 |
| CDX77280 | Canola | cytosol | 62.34 | 60.38 |
| AT1G20140.1 | Thale cress | cytosol | 62.99 | 59.51 |
| CDY16470 | Canola | cytosol | 61.04 | 59.12 |
| AT3G21860.1 | Thale cress | cytosol | 57.79 | 58.55 |
| Bra014159.1-P | Field mustard | cytosol | 60.39 | 58.49 |
| AT3G21850.1 | Thale cress | cytosol | 57.79 | 58.17 |
| AT5G42190.1 | Thale cress | cytosol | 64.29 | 57.89 |
| AT2G25700.1 | Thale cress | cytosol | 61.04 | 57.67 |
| AT3G60020.1 | Thale cress | cytosol | 55.84 | 56.21 |
| AT3G21840.1 | Thale cress | cytosol | 44.81 | 55.2 |
| AT3G21830.1 | Thale cress | cytosol | 51.3 | 51.97 |
| AT1G10230.1 | Thale cress | cytosol | 53.25 | 51.9 |
| AT3G25650.1 | Thale cress | cytosol | 59.09 | 51.41 |
| AT2G03190.1 | Thale cress | cytosol | 55.19 | 50.0 |
| AT2G20160.1 | Thale cress | cytosol | 48.05 | 49.33 |
| AT2G03160.1 | Thale cress | cytosol | 57.14 | 44.0 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | EntrezGene:825171 | UniProt:A0A178VIM9 | ProteinID:AEE80002.1 | Symbol:ASK13 |
| ArrayExpress:AT3G60010 | EnsemblPlantsGene:AT3G60010 | RefSeq:AT3G60010 | TAIR:AT3G60010 | RefSeq:AT3G60010-TAIR-G | EnsemblPlants:AT3G60010.1 |
| TAIR:AT3G60010.1 | ProteinID:CAB75820.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | RefSeq:NP_567090.1 |
| ProteinID:OAP06260.1 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PO:PO:0000084 | PO:PO:0001017 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009049 |
| PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11165 |
| PANTHER:PTHR11165:SF89 | UniProt:Q9M1X5 | InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00512 | SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI000009D809 |
Description
ASK13SK13 [Source:UniProtKB/TrEMBL;Acc:A0A178VIM9]
Coordinates
chr3:-:22162914..22163601
Molecular Weight (calculated)
17234.5 Da
IEP (calculated)
4.065
GRAVY (calculated)
-0.222
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKMVMLLSS DGESFQVEEA VAVQSQTIAH MIEDDCVANG VPIANVTGVI LSKVIEYCKK HVVSDSPTEE SKDELKKWDA EFMKALEQSS TLFDVMLAAN
101: YLNIKDLLDL GCQTVADMIT GKKPDEIRAL LGIENDFTPE EEEEIRKENQ WAFE
101: YLNIKDLLDL GCQTVADMIT GKKPDEIRAL LGIENDFTPE EEEEIRKENQ WAFE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.