Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G53060.1 | Thale cress | cytosol | 37.25 | 67.06 |
| AT4G34210.1 | Thale cress | cytosol | 57.52 | 57.89 |
| AT4G34470.1 | Thale cress | cytosol | 56.21 | 56.58 |
| AT3G60010.1 | Thale cress | cytosol | 56.21 | 55.84 |
| AT3G21850.1 | Thale cress | cytosol | 55.56 | 55.56 |
| AT1G20140.1 | Thale cress | cytosol | 58.82 | 55.21 |
| AT1G75950.1 | Thale cress | cytosol | 57.52 | 55.0 |
| AT2G03170.1 | Thale cress | cytosol | 52.29 | 53.69 |
| AT3G21840.1 | Thale cress | cytosol | 43.79 | 53.6 |
| Bra014519.1-P | Field mustard | cytosol | 55.56 | 53.46 |
| CDX89042 | Canola | cytosol | 55.56 | 53.46 |
| CDY69121 | Canola | cytosol | 45.75 | 53.44 |
| AT2G25700.1 | Thale cress | cytosol | 56.86 | 53.37 |
| AT3G21860.1 | Thale cress | cytosol | 52.94 | 53.29 |
| AT5G42190.1 | Thale cress | cytosol | 58.82 | 52.63 |
| AT3G21830.1 | Thale cress | cytosol | 50.33 | 50.66 |
| AT1G10230.1 | Thale cress | cytosol | 51.63 | 50.0 |
| AT2G20160.1 | Thale cress | cytosol | 45.75 | 46.67 |
| AT2G03190.1 | Thale cress | cytosol | 50.33 | 45.29 |
| AT3G25650.1 | Thale cress | cytosol | 50.33 | 43.5 |
| AT2G03160.1 | Thale cress | cytosol | 52.94 | 40.5 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | EntrezGene:825172 | UniProt:A0A178VPE2 | ProteinID:AEE80003.1 | Symbol:ASK5 |
| ArrayExpress:AT3G60020 | EnsemblPlantsGene:AT3G60020 | RefSeq:AT3G60020 | TAIR:AT3G60020 | RefSeq:AT3G60020-TAIR-G | EnsemblPlants:AT3G60020.1 |
| TAIR:AT3G60020.1 | ProteinID:CAB75821.1 | EMBL:DQ056631 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | GO:GO:0030246 |
| RefSeq:NP_567091.1 | ProteinID:OAP06933.1 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PO:PO:0000056 |
| PO:PO:0000084 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0009031 | PO:PO:0009046 |
| PO:PO:0009052 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF86 | UniProt:Q9M1X4 |
| InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 |
| SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI00000A4034 | : | : |
Description
ASK5SK5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPE2]
Coordinates
chr3:-:22164630..22165376
Molecular Weight (calculated)
17444.8 Da
IEP (calculated)
4.381
GRAVY (calculated)
-0.280
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTKIMLKSS DGKSFEIDED VARKSIAINH MVEDGCATDV IPLRNVTSKI LKIVIDYCEK HVKSKEEEDL KEWDADFMKT IETTILFDVM MAANYLNIQS
101: LLDLTCKTVS DLLQADLLSG KTPDEIRAHF NIENDLTAEE VAKIREENQW AFQ
101: LLDLTCKTVS DLLQADLLSG KTPDEIRAHF NIENDLTAEE VAKIREENQW AFQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.