Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G25650.1 | Thale cress | cytosol | 62.0 | 70.06 |
| AT2G03170.1 | Thale cress | cytosol | 50.0 | 67.11 |
| AT1G10230.1 | Thale cress | cytosol | 52.0 | 65.82 |
| AT2G03190.1 | Thale cress | cytosol | 53.0 | 62.35 |
| AT4G34470.1 | Thale cress | cytosol | 46.0 | 60.53 |
| AT4G34210.1 | Thale cress | cytosol | 46.0 | 60.53 |
| AT3G21850.1 | Thale cress | cytosol | 46.0 | 60.13 |
| AT2G20160.1 | Thale cress | cytosol | 44.0 | 58.67 |
| AT1G75950.1 | Thale cress | cytosol | 46.0 | 57.5 |
| AT3G21860.1 | Thale cress | cytosol | 43.5 | 57.24 |
| AT3G60010.1 | Thale cress | cytosol | 44.0 | 57.14 |
| AT1G20140.1 | Thale cress | cytosol | 45.5 | 55.83 |
| Bra039504.1-P | Field mustard | cytosol | 46.0 | 54.44 |
| AT2G25700.1 | Thale cress | cytosol | 44.0 | 53.99 |
| AT5G42190.1 | Thale cress | cytosol | 46.0 | 53.8 |
| AT3G60020.1 | Thale cress | cytosol | 40.5 | 52.94 |
| CDY14922 | Canola | cytosol | 44.0 | 52.38 |
| AT3G53060.1 | Thale cress | cytosol | 22.0 | 51.76 |
| AT3G21830.1 | Thale cress | cytosol | 39.0 | 51.32 |
| AT3G21840.1 | Thale cress | cytosol | 31.0 | 49.6 |
| CDX96963 | Canola | cytosol | 45.0 | 47.62 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | EntrezGene:814845 | ProteinID:AAC34486.1 | ProteinID:AEC05670.1 | Symbol:ASK19 |
| ArrayExpress:AT2G03160 | EnsemblPlantsGene:AT2G03160 | RefSeq:AT2G03160 | TAIR:AT2G03160 | RefSeq:AT2G03160-TAIR-G | EnsemblPlants:AT2G03160.1 |
| TAIR:AT2G03160.1 | Unigene:At.52614 | EMBL:DQ056525 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 |
| RefSeq:NP_565295.1 | UniProt:O81058 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PO:PO:0000033 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009067 | PO:PO:0009088 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF24 |
| InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 |
| SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI000009F77C | SEG:seg | : |
Description
ASK19SKP1-like protein 19 [Source:UniProtKB/Swiss-Prot;Acc:O81058]
Coordinates
chr2:+:959645..960247
Molecular Weight (calculated)
22716.4 Da
IEP (calculated)
4.181
GRAVY (calculated)
-0.698
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSKKIVLTS SDGESFKVEE VVARKLQIVG HIIEDDCATN KIPIPNVTGE ILAKVIEYCK KHVEDDDDVV ETHESSTKGD KTVEEAKKKP DDVAVPESTE
101: GDDEAEDKKE KLNEWDAKFM KDFDIKTIFD IILAANYLNV QGLFDLCSKT IADYIKDMTP EEVRELFNIE NDFTPEEEEA IRNENAWTFE QDGKQQVPKP
101: GDDEAEDKKE KLNEWDAKFM KDFDIKTIFD IILAANYLNV QGLFDLCSKT IADYIKDMTP EEVRELFNIE NDFTPEEEEA IRNENAWTFE QDGKQQVPKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.