Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G21840.1 | Thale cress | cytosol | 69.74 | 84.8 |
| AT3G21850.1 | Thale cress | cytosol | 78.29 | 77.78 |
| AT3G21860.1 | Thale cress | cytosol | 73.03 | 73.03 |
| CDY69121 | Canola | cytosol | 48.03 | 55.73 |
| AT4G34210.1 | Thale cress | cytosol | 55.26 | 55.26 |
| AT4G34470.1 | Thale cress | cytosol | 54.61 | 54.61 |
| AT1G75950.1 | Thale cress | cytosol | 56.58 | 53.75 |
| CDX89042 | Canola | cytosol | 55.92 | 53.46 |
| Bra014519.1-P | Field mustard | cytosol | 55.92 | 53.46 |
| AT2G03170.1 | Thale cress | cytosol | 51.32 | 52.35 |
| AT5G42190.1 | Thale cress | cytosol | 57.89 | 51.46 |
| AT3G60010.1 | Thale cress | cytosol | 51.97 | 51.3 |
| AT3G60020.1 | Thale cress | cytosol | 50.66 | 50.33 |
| AT1G20140.1 | Thale cress | cytosol | 53.29 | 49.69 |
| AT2G25700.1 | Thale cress | cytosol | 51.32 | 47.85 |
| AT1G10230.1 | Thale cress | cytosol | 48.03 | 46.2 |
| AT3G53060.1 | Thale cress | cytosol | 25.66 | 45.88 |
| AT2G03190.1 | Thale cress | cytosol | 50.66 | 45.29 |
| AT3G25650.1 | Thale cress | cytosol | 51.97 | 44.63 |
| AT2G20160.1 | Thale cress | cytosol | 43.42 | 44.0 |
| AT2G03160.1 | Thale cress | cytosol | 51.32 | 39.0 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | EntrezGene:821737 | ProteinID:AEE76556.1 | Symbol:ASK8 | ArrayExpress:AT3G21830 |
| EnsemblPlantsGene:AT3G21830 | RefSeq:AT3G21830 | TAIR:AT3G21830 | RefSeq:AT3G21830-TAIR-G | EnsemblPlants:AT3G21830.1 | TAIR:AT3G21830.1 |
| Unigene:At.62404 | ProteinID:BAB02845.1 | EMBL:DQ056601 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019005 | GO:GO:0019538 | RefSeq:NP_566692.1 | PFAM:PF01466 |
| PFAM:PF03931 | PIRSF:PIRSF028729 | PO:PO:0009001 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF86 | UniProt:Q9LSY1 |
| InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 |
| SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI00000A8E7D | SEG:seg | : |
Description
ASK8SKP1-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSY1]
Coordinates
chr3:-:7693481..7693939
Molecular Weight (calculated)
17493.8 Da
IEP (calculated)
4.545
GRAVY (calculated)
-0.535
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTKKIMLKS SEGKTFEIEE ETARQCQTIA HMIEAECTDN VILVLKMTSE ILEMVIEYCN KHHVDAANPC SDDDLEKWDK EFMEKDKSTI FALTNAANFL
101: NNKSLLHLAG QTVADMIKGN TPKQMREFFN IENDLTPEEE AAIRRENKWA FE
101: NNKSLLHLAG QTVADMIKGN TPKQMREFFN IENDLTPEEE AAIRRENKWA FE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.