Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G03170.1 | Thale cress | cytosol | 61.39 | 65.1 |
| AT3G25650.1 | Thale cress | cytosol | 69.62 | 62.15 |
| Bra039504.1-P | Field mustard | cytosol | 64.56 | 60.35 |
| CDY14922 | Canola | cytosol | 63.29 | 59.52 |
| AT2G03190.1 | Thale cress | cytosol | 63.92 | 59.41 |
| AT2G20160.1 | Thale cress | cytosol | 55.7 | 58.67 |
| AT4G34210.1 | Thale cress | cytosol | 55.06 | 57.24 |
| AT4G34470.1 | Thale cress | cytosol | 53.8 | 55.92 |
| AT1G75950.1 | Thale cress | cytosol | 55.7 | 55.0 |
| AT5G42190.1 | Thale cress | cytosol | 58.86 | 54.39 |
| AT3G60010.1 | Thale cress | cytosol | 51.9 | 53.25 |
| AT3G21850.1 | Thale cress | cytosol | 51.27 | 52.94 |
| CDX96963 | Canola | cytosol | 62.66 | 52.38 |
| AT1G20140.1 | Thale cress | cytosol | 53.8 | 52.15 |
| AT2G03160.1 | Thale cress | cytosol | 65.82 | 52.0 |
| AT3G21860.1 | Thale cress | cytosol | 50.0 | 51.97 |
| AT3G60020.1 | Thale cress | cytosol | 50.0 | 51.63 |
| AT2G25700.1 | Thale cress | cytosol | 50.63 | 49.08 |
| AT3G21830.1 | Thale cress | cytosol | 46.2 | 48.03 |
| AT3G21840.1 | Thale cress | cytosol | 36.71 | 46.4 |
| AT3G53060.1 | Thale cress | cytosol | 24.05 | 44.71 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | EntrezGene:837562 | ProteinID:AAD32873.1 | ProteinID:AEE28557.2 | Symbol:ASK18 |
| ArrayExpress:AT1G10230 | EnsemblPlantsGene:AT1G10230 | RefSeq:AT1G10230 | TAIR:AT1G10230 | RefSeq:AT1G10230-TAIR-G | EnsemblPlants:AT1G10230.1 |
| TAIR:AT1G10230.1 | EMBL:AY086743 | EMBL:BT002822 | EMBL:BT004461 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0019538 | RefSeq:NP_563864.2 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PO:PO:0000013 |
| PO:PO:0000026 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0020148 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF89 | UniProt:Q9SY65 |
| InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 |
| SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI0001A336BE | SEG:seg | : |
Description
ASK18SKP1-like protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY65]
Coordinates
chr1:+:3355675..3356151
Molecular Weight (calculated)
18164.2 Da
IEP (calculated)
3.940
GRAVY (calculated)
-0.470
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSNKILLTS SDGESFEIDE AVARKFLIIV HMMEDNCAGE AIPLENVTGD ILSKIIEYAK MHVNEPSEED EDEEAKKNLD SWDAKFMEKL DLETIFKIIL
101: AANYLNFEGL LGFASQTVAD YIKDKTPEEV REIFNIENDF TPEEEEEIRK ENAWTFNE
101: AANYLNFEGL LGFASQTVAD YIKDKTPEEV REIFNIENDF TPEEEEEIRK ENAWTFNE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.