Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G34210.1 | Thale cress | cytosol | 98.03 | 98.03 |
| AT1G75950.1 | Thale cress | cytosol | 74.34 | 70.62 |
| AT3G60010.1 | Thale cress | cytosol | 68.42 | 67.53 |
| AT3G21860.1 | Thale cress | cytosol | 65.13 | 65.13 |
| AT2G03170.1 | Thale cress | cytosol | 62.5 | 63.76 |
| AT3G21850.1 | Thale cress | cytosol | 63.82 | 63.4 |
| AT5G42190.1 | Thale cress | cytosol | 67.76 | 60.23 |
| AT3G53060.1 | Thale cress | cytosol | 32.89 | 58.82 |
| AT3G60020.1 | Thale cress | cytosol | 56.58 | 56.21 |
| AT1G20140.1 | Thale cress | cytosol | 59.87 | 55.83 |
| AT3G21840.1 | Thale cress | cytosol | 45.39 | 55.2 |
| AT3G21830.1 | Thale cress | cytosol | 54.61 | 54.61 |
| AT2G25700.1 | Thale cress | cytosol | 58.55 | 54.6 |
| AT1G10230.1 | Thale cress | cytosol | 55.92 | 53.8 |
| AT3G25650.1 | Thale cress | cytosol | 59.87 | 51.41 |
| AT2G03190.1 | Thale cress | cytosol | 56.58 | 50.59 |
| AT2G20160.1 | Thale cress | cytosol | 47.37 | 48.0 |
| AT2G03160.1 | Thale cress | cytosol | 60.53 | 46.0 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | EntrezGene:829598 | ProteinID:AEE86383.1 | Symbol:ASK12 | ArrayExpress:AT4G34470 |
| EnsemblPlantsGene:AT4G34470 | RefSeq:AT4G34470 | TAIR:AT4G34470 | RefSeq:AT4G34470-TAIR-G | EnsemblPlants:AT4G34470.1 | TAIR:AT4G34470.1 |
| ProteinID:CAA18826.1 | ProteinID:CAB80164.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | RefSeq:NP_567967.1 |
| UniProt:O65674 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PO:PO:0007131 | PO:PO:0009049 |
| PANTHER:PTHR11165 | PANTHER:PTHR11165:SF89 | InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00512 | SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI00000A8003 |
Description
ASK12SKP1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:O65674]
Coordinates
chr4:-:16480008..16480616
Molecular Weight (calculated)
17363.5 Da
IEP (calculated)
3.992
GRAVY (calculated)
-0.298
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSKMIVLMS SDGQSFEVEE AVAIQSQTIA HMVEDDCVAD GIPLANVESK ILVKVIEYCK KYHVDEANPI SEEDLNKWDE KFMDLEQSTI FELILAANYL
101: NIKSLFDLTC QTVADMIKGK TPEEIRSTFN IENDFTPEEE EAVRKENQWA FE
101: NIKSLFDLTC QTVADMIKGK TPEEIRSTFN IENDFTPEEE EAVRKENQWA FE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.