Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G21850.1 | Thale cress | cytosol | 84.87 | 84.31 |
| AT3G21840.1 | Thale cress | cytosol | 63.82 | 77.6 |
| AT3G21830.1 | Thale cress | cytosol | 73.03 | 73.03 |
| AT4G34210.1 | Thale cress | cytosol | 65.79 | 65.79 |
| AT4G34470.1 | Thale cress | cytosol | 65.13 | 65.13 |
| AT3G53060.1 | Thale cress | cytosol | 36.18 | 64.71 |
| CDY69121 | Canola | cytosol | 54.61 | 63.36 |
| AT1G75950.1 | Thale cress | cytosol | 66.45 | 63.12 |
| AT5G42190.1 | Thale cress | cytosol | 67.76 | 60.23 |
| Bra014519.1-P | Field mustard | cytosol | 61.18 | 58.49 |
| CDX89042 | Canola | cytosol | 61.18 | 58.49 |
| AT2G03170.1 | Thale cress | cytosol | 57.24 | 58.39 |
| AT3G60010.1 | Thale cress | cytosol | 58.55 | 57.79 |
| AT1G20140.1 | Thale cress | cytosol | 59.87 | 55.83 |
| AT2G25700.1 | Thale cress | cytosol | 57.89 | 53.99 |
| AT3G60020.1 | Thale cress | cytosol | 53.29 | 52.94 |
| AT2G03190.1 | Thale cress | cytosol | 55.92 | 50.0 |
| AT1G10230.1 | Thale cress | cytosol | 51.97 | 50.0 |
| AT3G25650.1 | Thale cress | cytosol | 57.24 | 49.15 |
| AT2G20160.1 | Thale cress | cytosol | 46.71 | 47.33 |
| AT2G03160.1 | Thale cress | cytosol | 57.24 | 43.5 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | EntrezGene:821740 | ProteinID:AEE76559.1 | Symbol:ASK10 | ArrayExpress:AT3G21860 |
| EnsemblPlantsGene:AT3G21860 | RefSeq:AT3G21860 | TAIR:AT3G21860 | RefSeq:AT3G21860-TAIR-G | EnsemblPlants:AT3G21860.1 | TAIR:AT3G21860.1 |
| ProteinID:BAB02848.1 | EMBL:DQ056602 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019005 | GO:GO:0019538 |
| RefSeq:NP_566695.1 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PO:PO:0000003 | PANTHER:PTHR11165 |
| PANTHER:PTHR11165:SF86 | UniProt:Q9LSX8 | InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00512 | SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI000009DE9A |
Description
ASK10SKP1-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSX8]
Coordinates
chr3:-:7699723..7700446
Molecular Weight (calculated)
17573.5 Da
IEP (calculated)
4.311
GRAVY (calculated)
-0.607
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTKKIILKS SDGHSFEVEE EAACQCQTIA HMSEDDCTDN GIPLPEVTGK ILEMVIEYCN KHHVDAANPC SDEDLKKWDK EFMEKYQSTI FDLIMAANYL
101: NIKSLLDLAC QTVADMIKDN TVEHTRKFFN IENDYTHEEE EAVRRENQWG FE
101: NIKSLLDLAC QTVADMIKDN TVEHTRKFFN IENDYTHEEE EAVRRENQWG FE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.