Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G25700.1 | Thale cress | cytosol | 90.8 | 90.8 |
| CDY29370 | Canola | cytosol | 79.75 | 80.75 |
| Bra025795.1-P | Field mustard | cytosol | 79.75 | 80.75 |
| CDY44209 | Canola | cytosol | 79.14 | 80.12 |
| CDY67544 | Canola | cytosol | 68.71 | 69.57 |
| CDY01389 | Canola | cytosol | 68.71 | 69.57 |
| CDY63159 | Canola | cytosol | 68.1 | 68.94 |
| Bra012216.1-P | Field mustard | cytosol | 66.87 | 68.12 |
| AT1G75950.1 | Thale cress | cytosol | 66.26 | 67.5 |
| AT5G42190.1 | Thale cress | cytosol | 68.71 | 65.5 |
| Bra012214.1-P | Field mustard | cytosol | 52.76 | 64.18 |
| AT2G03170.1 | Thale cress | cytosol | 57.67 | 63.09 |
| AT3G60010.1 | Thale cress | cytosol | 59.51 | 62.99 |
| AT3G53060.1 | Thale cress | cytosol | 32.52 | 62.35 |
| AT3G21850.1 | Thale cress | cytosol | 58.28 | 62.09 |
| AT4G34210.1 | Thale cress | cytosol | 57.67 | 61.84 |
| AT3G21860.1 | Thale cress | cytosol | 55.83 | 59.87 |
| AT4G34470.1 | Thale cress | cytosol | 55.83 | 59.87 |
| CDY43408 | Canola | cytosol | 55.83 | 59.87 |
| CDY68971 | Canola | cytosol | 55.21 | 59.21 |
| Bra012213.1-P | Field mustard | cytosol | 55.21 | 59.21 |
| AT3G60020.1 | Thale cress | cytosol | 55.21 | 58.82 |
| AT2G20160.1 | Thale cress | cytosol | 50.92 | 55.33 |
| AT3G21840.1 | Thale cress | cytosol | 41.72 | 54.4 |
| AT1G10230.1 | Thale cress | cytosol | 52.15 | 53.8 |
| AT2G03190.1 | Thale cress | cytosol | 55.83 | 53.53 |
| AT3G21830.1 | Thale cress | cytosol | 49.69 | 53.29 |
| AT3G25650.1 | Thale cress | cytosol | 54.6 | 50.28 |
| AT2G03160.1 | Thale cress | cytosol | 55.83 | 45.5 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | EntrezGene:838604 | UniProt:A0A178W187 | ProteinID:AAF79899.1 | ProteinID:AEE29943.1 |
| Symbol:ASK4 | ArrayExpress:AT1G20140 | EnsemblPlantsGene:AT1G20140 | RefSeq:AT1G20140 | TAIR:AT1G20140 | RefSeq:AT1G20140-TAIR-G |
| EnsemblPlants:AT1G20140.1 | TAIR:AT1G20140.1 | EMBL:AY058205 | EMBL:AY098980 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 |
| GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019005 | GO:GO:0019538 | RefSeq:NP_564105.1 | ProteinID:OAP12038.1 |
| PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PO:PO:0000030 | PO:PO:0000033 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0009010 | PO:PO:0025281 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF89 | UniProt:Q9LNT9 |
| InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 |
| SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI000009F941 | : | : |
Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
Coordinates
chr1:+:6986312..6987863
Molecular Weight (calculated)
18188.4 Da
IEP (calculated)
4.312
GRAVY (calculated)
-0.464
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.