Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G20140.1 | Thale cress | cytosol | 90.8 | 90.8 |
| CDY44209 | Canola | cytosol | 79.14 | 80.12 |
| CDY29370 | Canola | cytosol | 79.14 | 80.12 |
| Bra025795.1-P | Field mustard | cytosol | 79.14 | 80.12 |
| CDY67544 | Canola | cytosol | 69.94 | 70.81 |
| CDY63159 | Canola | cytosol | 69.33 | 70.19 |
| CDY01389 | Canola | cytosol | 68.71 | 69.57 |
| Bra012216.1-P | Field mustard | cytosol | 66.87 | 68.12 |
| AT1G75950.1 | Thale cress | cytosol | 66.26 | 67.5 |
| Bra012214.1-P | Field mustard | cytosol | 55.21 | 67.16 |
| AT5G42190.1 | Thale cress | cytosol | 65.64 | 62.57 |
| AT2G03170.1 | Thale cress | cytosol | 57.06 | 62.42 |
| AT3G60010.1 | Thale cress | cytosol | 57.67 | 61.04 |
| AT3G21850.1 | Thale cress | cytosol | 56.44 | 60.13 |
| CDY43408 | Canola | cytosol | 55.83 | 59.87 |
| AT4G34210.1 | Thale cress | cytosol | 55.83 | 59.87 |
| Bra012213.1-P | Field mustard | cytosol | 55.21 | 59.21 |
| CDY68971 | Canola | cytosol | 55.21 | 59.21 |
| AT3G53060.1 | Thale cress | cytosol | 30.67 | 58.82 |
| AT4G34470.1 | Thale cress | cytosol | 54.6 | 58.55 |
| AT3G21860.1 | Thale cress | cytosol | 53.99 | 57.89 |
| AT3G60020.1 | Thale cress | cytosol | 53.37 | 56.86 |
| AT2G20160.1 | Thale cress | cytosol | 50.31 | 54.67 |
| AT2G03190.1 | Thale cress | cytosol | 54.6 | 52.35 |
| AT3G21830.1 | Thale cress | cytosol | 47.85 | 51.32 |
| AT3G21840.1 | Thale cress | cytosol | 39.26 | 51.2 |
| AT1G10230.1 | Thale cress | cytosol | 49.08 | 50.63 |
| AT3G25650.1 | Thale cress | cytosol | 52.76 | 48.59 |
| AT2G03160.1 | Thale cress | cytosol | 53.99 | 44.0 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | EntrezGene:817111 | ProteinID:AAD31370.1 | ProteinID:AEC07739.1 | Symbol:ASK3 |
| ArrayExpress:AT2G25700 | EnsemblPlantsGene:AT2G25700 | RefSeq:AT2G25700 | TAIR:AT2G25700 | RefSeq:AT2G25700-TAIR-G | EnsemblPlants:AT2G25700.1 |
| TAIR:AT2G25700.1 | EMBL:AY052700 | EMBL:AY139806 | Unigene:At.26484 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0019538 | RefSeq:NP_565604.1 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PO:PO:0000033 |
| PO:PO:0009031 | PO:PO:0009052 | PO:PO:0009088 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF89 | UniProt:Q9SL93 |
| InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 |
| SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI00000A483E | SEG:seg | : |
Description
ASK3SKP1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL93]
Coordinates
chr2:-:10948747..10949626
Molecular Weight (calculated)
18365.5 Da
IEP (calculated)
4.437
GRAVY (calculated)
-0.521
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETKKMIIL KSSDGESFEV EEAVAVESQT IKHMIEDDCV DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS TENHELKTWD NDFVKVDHPT
101: LFDLLRAANY LNISGLLDLT CKAVADQMRG KTPAQMREHF NIKNDYTPEE EAEVRNENRW AFE
101: LFDLLRAANY LNISGLLDLT CKAVADQMRG KTPAQMREHF NIKNDYTPEE EAEVRNENRW AFE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.