Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G03170.1 | Thale cress | cytosol | 61.33 | 61.74 |
| AT2G03190.1 | Thale cress | cytosol | 68.0 | 60.0 |
| AT1G10230.1 | Thale cress | cytosol | 58.67 | 55.7 |
| AT3G25650.1 | Thale cress | cytosol | 64.67 | 54.8 |
| AT1G20140.1 | Thale cress | cytosol | 55.33 | 50.92 |
| AT2G25700.1 | Thale cress | cytosol | 54.67 | 50.31 |
| AT1G75950.1 | Thale cress | cytosol | 52.67 | 49.38 |
| Bra039504.1-P | Field mustard | cytosol | 54.67 | 48.52 |
| AT3G60010.1 | Thale cress | cytosol | 49.33 | 48.05 |
| AT4G34210.1 | Thale cress | cytosol | 48.67 | 48.03 |
| AT5G42190.1 | Thale cress | cytosol | 54.67 | 47.95 |
| AT3G21850.1 | Thale cress | cytosol | 48.67 | 47.71 |
| AT4G34470.1 | Thale cress | cytosol | 48.0 | 47.37 |
| CDY14922 | Canola | cytosol | 52.67 | 47.02 |
| AT3G21860.1 | Thale cress | cytosol | 47.33 | 46.71 |
| AT3G60020.1 | Thale cress | cytosol | 46.67 | 45.75 |
| AT3G21840.1 | Thale cress | cytosol | 37.33 | 44.8 |
| AT2G03160.1 | Thale cress | cytosol | 58.67 | 44.0 |
| AT3G21830.1 | Thale cress | cytosol | 44.0 | 43.42 |
| AT3G53060.1 | Thale cress | cytosol | 24.0 | 42.35 |
| CDX96963 | Canola | cytosol | 53.33 | 42.33 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | EntrezGene:816536 | ProteinID:AAD24382.1 | ProteinID:AEC06973.1 | ArrayExpress:AT2G20160 |
| EnsemblPlantsGene:AT2G20160 | RefSeq:AT2G20160 | TAIR:AT2G20160 | RefSeq:AT2G20160-TAIR-G | EnsemblPlants:AT2G20160.1 | TAIR:AT2G20160.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | Symbol:MEO | RefSeq:NP_565467.1 | PFAM:PF01466 |
| PFAM:PF03931 | PIRSF:PIRSF028729 | PO:PO:0009001 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF86 | UniProt:Q9SL65 |
| InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 |
| SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI00000A4A5E | SEG:seg | : |
Description
ASK17SKP1-like protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL65]
Coordinates
chr2:-:8699511..8700186
Molecular Weight (calculated)
17286.5 Da
IEP (calculated)
4.197
GRAVY (calculated)
-0.279
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSKKIVLTS SDDECFEIDE AVARKMQMVA HMIDDDCADK AIRLQNVTGK ILAIIIEYCK KHVDDVEAKN EFVTWDAEFV KNIDMDTLFK LLDAADYLIV
101: IGLKNLIAQA IADYTADKTV NEIRELFNIE NDYTPEEEEE LRKKNEWAFN
101: IGLKNLIAQA IADYTADKTV NEIRELFNIE NDYTPEEEEE LRKKNEWAFN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.