Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G03170.1 | Thale cress | cytosol | 61.18 | 69.8 |
| AT2G20160.1 | Thale cress | cytosol | 60.0 | 68.0 |
| AT3G25650.1 | Thale cress | cytosol | 68.82 | 66.1 |
| AT1G10230.1 | Thale cress | cytosol | 59.41 | 63.92 |
| Bra039504.1-P | Field mustard | cytosol | 57.65 | 57.99 |
| AT4G34210.1 | Thale cress | cytosol | 51.76 | 57.89 |
| AT3G21850.1 | Thale cress | cytosol | 51.76 | 57.52 |
| AT4G34470.1 | Thale cress | cytosol | 50.59 | 56.58 |
| AT1G75950.1 | Thale cress | cytosol | 52.94 | 56.25 |
| CDY14922 | Canola | cytosol | 55.29 | 55.95 |
| AT3G21860.1 | Thale cress | cytosol | 50.0 | 55.92 |
| AT1G20140.1 | Thale cress | cytosol | 53.53 | 55.83 |
| AT3G60010.1 | Thale cress | cytosol | 50.0 | 55.19 |
| AT2G25700.1 | Thale cress | cytosol | 52.35 | 54.6 |
| AT2G03160.1 | Thale cress | cytosol | 62.35 | 53.0 |
| AT5G42190.1 | Thale cress | cytosol | 52.94 | 52.63 |
| AT3G53060.1 | Thale cress | cytosol | 25.88 | 51.76 |
| AT3G21830.1 | Thale cress | cytosol | 45.29 | 50.66 |
| AT3G21840.1 | Thale cress | cytosol | 37.06 | 50.4 |
| AT3G60020.1 | Thale cress | cytosol | 45.29 | 50.33 |
| CDX96963 | Canola | cytosol | 52.94 | 47.62 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | EntrezGene:814848 | ProteinID:AAC34483.1 | ProteinID:AEC05673.1 | Symbol:ASK16 |
| ArrayExpress:AT2G03190 | EnsemblPlantsGene:AT2G03190 | RefSeq:AT2G03190 | TAIR:AT2G03190 | RefSeq:AT2G03190-TAIR-G | EnsemblPlants:AT2G03190.1 |
| TAIR:AT2G03190.1 | Unigene:At.50066 | EMBL:BT015070 | EMBL:BT015726 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0019005 | GO:GO:0019538 | RefSeq:NP_565297.1 | UniProt:O81055 | PFAM:PF01466 | PFAM:PF03931 |
| PIRSF:PIRSF028729 | PO:PO:0009001 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF89 | InterPro:SKP1 | InterPro:SKP1-like |
| InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ |
| InterPro:Skp1_comp_dimer | UniParc:UPI00000AB636 | SEG:seg | : | : | : |
Description
ASK16SKP1-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:O81055]
Coordinates
chr2:+:964214..964901
Molecular Weight (calculated)
19399.6 Da
IEP (calculated)
3.917
GRAVY (calculated)
-0.464
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSNKIVLTS SDDESFEVEE AVARKLKVIA HMIDDDCADK AIPLENVTGN ILALVIEYCK KHVLDDVDDS DDSTEATSEN VNEEAKNELR TWDAEFMKEF
101: DMETVMKLIL AVNYLNVQDL LGLTCQTVAD HMKDMSPEEV RELFNIENDY TPEEEDAIRK ENAWAFEDLK
101: DMETVMKLIL AVNYLNVQDL LGLTCQTVAD HMKDMSPEEV RELFNIENDY TPEEEDAIRK ENAWAFEDLK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.