CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12069	Soybean	nucleus	67.61	20.17
KRH37088	Soybean	nucleus	67.61	20.13
KRH21524	Soybean	cytosol	16.2	10.22
KRG94875	Soybean	nucleus	20.42	8.41
KRH06660	Soybean	nucleus	20.42	8.41
KRH59511	Soybean	cytosol, nucleus	16.9	8.0
KRH32024	Soybean	cytosol	17.61	7.84
KRH71413	Soybean	nucleus	17.61	7.81
KRH02239	Soybean	nucleus	17.61	7.55
KRH08668	Soybean	nucleus	24.65	7.29
KRH70275	Soybean	nucleus	24.65	7.29
KRH43376	Soybean	nucleus	16.2	7.17
KRH37298	Soybean	cytosol	19.01	7.12
KRH50874	Soybean	nucleus	16.2	6.99
KRG91764	Soybean	cytoskeleton, cytosol, nucleus	14.08	5.12
KRH35010	Soybean	nucleus	5.63	4.97
KRH03886	Soybean	nucleus	16.2	4.47
KRH57171	Soybean	cytosol	15.49	4.28
KRH13395	Soybean	nucleus	16.9	3.36
KRH20750	Soybean	nucleus	16.9	3.35
KRH20528	Soybean	cytosol	16.9	3.08
KRH10790	Soybean	cytosol	16.9	2.91
KRG93160	Soybean	cytosol	15.49	2.9
KRH35009	Soybean	cytosol	2.82	2.9
KRH56498	Soybean	cytosol	14.79	2.77
KRH49977	Soybean	cytosol	9.15	1.9
KRH21526	Soybean	cytosol, peroxisome	0.0	0.0

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EMBL:ACUP02003941	EnsemblPlantsGene:GLYMA_06G241500	GO:GO:0000398	GO:GO:0000974
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005662	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0071011	GO:GO:0071013	GO:GO:0080008	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:K7KX22	EnsemblPlants:KRH55267	ProteinID:KRH55267	ProteinID:KRH55267.1	PFAM:PF00400	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19923	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0002948DB5
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:

Description

hypothetical protein

Coordinates

chr6:+:39945898..39948468

Molecular Weight (calculated)

15721.9 Da

IEP (calculated)

7.740

GRAVY (calculated)

0.061

Length

142 amino acids

Sequence
(BLAST)

001: MNLHGAVLLG QFDSELAVVG RVTAVDSEVI SGHLGWVRSV AVDPSNISWL FCSSCSFGQL WDLASGVLKL TLIVHIEQVR GLAVSNKHTY MFSAGDHKQN
101: PQVVTGSHDT TIKMWDLRYG KTMPTLTNHK KSIYNLLVEH FN

Best Arabidopsis Sequence Match ( AT4G15900.1 )
(BLAST)

001: MPAPTTEIEP IEAQSLKKLS LKSLKRSLEL FSPVHGQFPP PDPEAKQIRL SHKMKVAFGG VEPVVSQPPR QPDRINEQPG PSNALSLAAP EGSKSTQKGA
101: TESAIVVGPT LLRPILPKGL NYTGSSGKST TIIPANVSSY QRNLSTAALM ERIPSRWPRP EWHAPWKNYR VIQGHLGWVR SVAFDPSNEW FCTGSADRTI
201: KIWDVATGVL KLTLTGHIEQ VRGLAVSNRH TYMFSAGDDK QVKCWDLEQN KVIRSYHGHL SGVYCLALHP TLDVLLTGGR DSVCRVWDIR TKMQIFALSG
301: HDNTVCSVFT RPTDPQVVTG SHDTTIKFWD LRYGKTMSTL THHKKSVRAM TLHPKENAFA SASADNTKKF SLPKGEFCHN MLSQQKTIIN AMAVNEDGVM
401: VTGGDNGSIW FWDWKSGHSF QQSETIVQPG SLESEAGIYA ACYDNTGSRL VTCEADKTIK MWKEDENATP ETHPINFKPP KEIRRF

Arabidopsis Description

PRL1Protein pleiotropic regulatory locus 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42384]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.