CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91764	Soybean	cytoskeleton, cytosol, nucleus	86.96	35.81
KRH37298	Soybean	cytosol	57.76	24.54
KRH32024	Soybean	cytosol	14.29	7.21
KRH71413	Soybean	nucleus	13.04	6.56
KRH08668	Soybean	nucleus	19.25	6.46
KRG94875	Soybean	nucleus	13.66	6.38
KRH06660	Soybean	nucleus	13.04	6.09
KRH70275	Soybean	nucleus	18.01	6.04
KRH35009	Soybean	cytosol	4.97	5.8
KRH55267	Soybean	cytosol	4.97	5.63
KRH50874	Soybean	nucleus	10.56	5.17
KRH02239	Soybean	nucleus	10.56	5.14
KRH59511	Soybean	cytosol, nucleus	9.32	5.0
KRH43376	Soybean	nucleus	9.32	4.67
KRH03886	Soybean	nucleus	14.29	4.47
KRH57171	Soybean	cytosol	14.29	4.47
KRH12069	Soybean	nucleus	11.18	3.78
KRH37088	Soybean	nucleus	11.18	3.77
KRH21524	Soybean	cytosol	4.97	3.56
KRH13395	Soybean	nucleus	7.45	1.68
KRH20750	Soybean	nucleus	7.45	1.68
GSMUA_Achr3P27200_001	Banana	golgi, plasma membrane, vacuole	3.73	1.62
KRG93160	Soybean	cytosol	7.45	1.58
KRH56498	Soybean	cytosol	7.45	1.58
KRH10790	Soybean	cytosol	6.21	1.21
KRH20528	Soybean	cytosol	5.59	1.16
KRH21526	Soybean	cytosol, peroxisome	1.24	0.33
KRH49977	Soybean	cytosol	1.24	0.29

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.2	UniProt:A0A0R0I1P0	EMBL:ACUP02006648	EnsemblPlantsGene:GLYMA_10G218600	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	EnsemblPlants:KRH35010
ProteinID:KRH35010	ProteinID:KRH35010.1	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR19857	PANTHER:PTHR19857:SF8	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0006ED7936	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:45053332..45054389

Molecular Weight (calculated)

17779.1 Da

IEP (calculated)

3.809

GRAVY (calculated)

-0.484

Length

161 amino acids

Sequence
(BLAST)

001: MNAPPHHDDE DDNEQVFLDE SDIIHEVAMD NEDLPDADDD SELEEEDSNF VHKFTAHTGE LYSVSCSPTD AALVVTGSGD DRGFLWKIGQ GDWAFELQGH
101: EESVSTLAFS YDGQQLASVS LDGIIKVWDV SGNLEGRNFE GPGGGIEVRL LVKTRCYFCS Y

Best Arabidopsis Sequence Match ( AT1G71840.1 )
(BLAST)

001: MSNNTNNTEM NNLAMEEEDE GEIFLGESDV LREIDVDEED LPEADDDDMD DDGEQFDEND DSVHTFTGHK GELYALACSP TDATLVATGG GDDKAFLWKI
101: GNGDWAAELP GHKDSVSCLA FSYDGQLLAS GGLDGVVQIF DASSGTLKCV LDGPGAGIEW VRWHPRGHIV LAGSEDCSLW MWNADKEAYL NMFSGHNLNV
201: TCGDFTPDGK LICTGSDDAS LIVWNPKTCE SIHIVKGHPY HTEGLTCLDI NSNSSLAISG SKDGSVHIVN IVTGKVVSSL NSHTDSVECV KFSPSSATIP
301: LAATGGMDKK LIIWDLQHST PRFICEHEEG VTSLTWIGTS KYLATGCANG TVSIWDSLLG NCVHTYHGHQ DAVQAISVST NTDFIVSVSV DNTARVFESS
401: EFQNKVT

Arabidopsis Description

Transducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXQ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.